RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 CHADLQ6NUI6 762 aa20.05■□□□□ 0.8
SNX29P1-201ENST00000548357 SYNE4Q8N205 404 aa20.05■□□□□ 0.8
SNX29P1-201ENST00000548357 L3MBTL3Q96JM7 780 aaPredicted RBP20.05■□□□□ 0.8
SNX29P1-201ENST00000548357 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
SNX29P1-201ENST00000548357 COL13A1Q5TAT6 717 aaPredicted RBP20.04■□□□□ 0.8
SNX29P1-201ENST00000548357 GIGYF2Q6Y7W6 1299 aaKnown RBP20.04■□□□□ 0.8
SNX29P1-201ENST00000548357 NYXQ9GZU5 481 aa20.04■□□□□ 0.8
SNX29P1-201ENST00000548357 TAF1DQ9H5J8 278 aaPredicted RBP20.04■□□□□ 0.8
SNX29P1-201ENST00000548357 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
SNX29P1-201ENST00000548357 ZNF428Q96B54 188 aa20.03■□□□□ 0.8
SNX29P1-201ENST00000548357 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
SNX29P1-201ENST00000548357 ALDH1B1P30837 517 aa20.02■□□□□ 0.8
SNX29P1-201ENST00000548357 NEUROD2Q15784 382 aa20.02■□□□□ 0.8
SNX29P1-201ENST00000548357 RTKN2Q8IZC4 609 aa20.02■□□□□ 0.8
SNX29P1-201ENST00000548357 PNNQ9H307 717 aaKnown RBP20.02■□□□□ 0.8
SNX29P1-201ENST00000548357 TRIM35Q9UPQ4 493 aa20.02■□□□□ 0.8
SNX29P1-201ENST00000548357 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
SNX29P1-201ENST00000548357 MYBBP1AQ9BQG0 1328 aaKnown RBP20.02■□□□□ 0.79
SNX29P1-201ENST00000548357 TRPM7Q96QT4 1865 aa20.01■□□□□ 0.79
SNX29P1-201ENST00000548357 FZD9O00144 591 aa20.01■□□□□ 0.79
SNX29P1-201ENST00000548357 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
SNX29P1-201ENST00000548357 PASKQ96RG2 1323 aa20.01■□□□□ 0.79
SNX29P1-201ENST00000548357 LRRC37AA6NMS7 1700 aa20■□□□□ 0.79
SNX29P1-201ENST00000548357 RPGRQ92834 1020 aaKnown RBP20■□□□□ 0.79
SNX29P1-201ENST00000548357 PSMD1Q99460 953 aa20■□□□□ 0.79
SNX29P1-201ENST00000548357 HSPA1AP0DMV8 641 aaKnown RBP19.99■□□□□ 0.79
SNX29P1-201ENST00000548357 HSPA1BP0DMV9 641 aaKnown RBP19.99■□□□□ 0.79
SNX29P1-201ENST00000548357 XAGE3Q8WTP9 111 aa19.99■□□□□ 0.79
SNX29P1-201ENST00000548357 MKRN1Q9UHC7 482 aaKnown RBP19.99■□□□□ 0.79
SNX29P1-201ENST00000548357 PPEF1O14829 653 aaPredicted RBP19.98■□□□□ 0.79
SNX29P1-201ENST00000548357 AIMP1Q12904 312 aaKnown RBP19.98■□□□□ 0.79
SNX29P1-201ENST00000548357 EAPPQ56P03 285 aaPredicted RBP19.98■□□□□ 0.79
SNX29P1-201ENST00000548357 COPS6Q7L5N1 327 aa19.98■□□□□ 0.79
SNX29P1-201ENST00000548357 LDHDQ86WU2 507 aa19.98■□□□□ 0.79
SNX29P1-201ENST00000548357 DUOX1Q9NRD9 1551 aa19.98■□□□□ 0.79
SNX29P1-201ENST00000548357 IQCA1LA6NCM1 817 aa19.97■□□□□ 0.79
SNX29P1-201ENST00000548357 CHL1O00533 1208 aa19.97■□□□□ 0.79
SNX29P1-201ENST00000548357 CRAMP1Q96RY5 1269 aa19.97■□□□□ 0.79
SNX29P1-201ENST00000548357 HACL1Q9UJ83 578 aa19.97■□□□□ 0.79
SNX29P1-201ENST00000548357 ABCC4O15439 1325 aa19.97■□□□□ 0.79
SNX29P1-201ENST00000548357 ITGBL1O95965 494 aaPredicted RBP19.96■□□□□ 0.79
SNX29P1-201ENST00000548357 EPHX2P34913 555 aa19.96■□□□□ 0.79
SNX29P1-201ENST00000548357 RBM17Q96I25 401 aaKnown RBP19.96■□□□□ 0.79
SNX29P1-201ENST00000548357 CREBZFQ9NS37 354 aa19.96■□□□□ 0.79
SNX29P1-201ENST00000548357 BABAM1Q9NWV8 329 aa19.96■□□□□ 0.79
SNX29P1-201ENST00000548357 ADAMTS8Q9UP79 889 aa19.96■□□□□ 0.79
SNX29P1-201ENST00000548357 LAS1LQ9Y4W2 734 aaKnown RBP19.96■□□□□ 0.79
SNX29P1-201ENST00000548357 HCLS1P14317 486 aaPredicted RBP19.95■□□□□ 0.78
SNX29P1-201ENST00000548357 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
SNX29P1-201ENST00000548357 PARP10Q53GL7 1025 aa19.95■□□□□ 0.78
SNX29P1-201ENST00000548357 PPP1R42Q7Z4L9 355 aa19.95■□□□□ 0.78
SNX29P1-201ENST00000548357 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
SNX29P1-201ENST00000548357 UTP14AQ9BVJ6 771 aaKnown RBP19.95■□□□□ 0.78
SNX29P1-201ENST00000548357 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
SNX29P1-201ENST00000548357 SLC10A5Q5PT55 438 aa19.94■□□□□ 0.78
SNX29P1-201ENST00000548357 MAP1SQ66K74 1059 aaPredicted RBP19.94■□□□□ 0.78
SNX29P1-201ENST00000548357 RUNDC1Q96C34 613 aa19.94■□□□□ 0.78
SNX29P1-201ENST00000548357 GJA3Q9Y6H8 435 aa19.94■□□□□ 0.78
SNX29P1-201ENST00000548357 CNTNAP1P78357 1384 aa19.94■□□□□ 0.78
SNX29P1-201ENST00000548357 FMR1Q06787 632 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNX29P1-201ENST00000548357 GPC2Q8N158 579 aa19.93■□□□□ 0.78
SNX29P1-201ENST00000548357 DDX21Q9NR30 783 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNX29P1-201ENST00000548357 POLR2AP24928 1970 aaKnown RBP19.92■□□□□ 0.78
SNX29P1-201ENST00000548357 SCNN1DP51172 638 aa19.92■□□□□ 0.78
SNX29P1-201ENST00000548357 AOC3Q16853 763 aa19.92■□□□□ 0.78
SNX29P1-201ENST00000548357 CC2D2BQ6DHV5 1058 aa19.92■□□□□ 0.78
SNX29P1-201ENST00000548357 LARGE2Q8N3Y3 721 aa19.92■□□□□ 0.78
SNX29P1-201ENST00000548357 NLRP3Q96P20 1036 aa19.92■□□□□ 0.78
SNX29P1-201ENST00000548357 SPEF2Q9C093 1822 aa19.91■□□□□ 0.78
SNX29P1-201ENST00000548357 EPS15P42566 896 aa19.91■□□□□ 0.78
SNX29P1-201ENST00000548357 TCIRG1Q13488 830 aa19.91■□□□□ 0.78
SNX29P1-201ENST00000548357 JDP2Q8WYK2 163 aa19.91■□□□□ 0.78
SNX29P1-201ENST00000548357 CLEC11AQ9Y240 323 aa19.91■□□□□ 0.78
SNX29P1-201ENST00000548357 ATP6V0A2Q9Y487 856 aa19.91■□□□□ 0.78
SNX29P1-201ENST00000548357 SCN9AQ15858 1988 aa19.9■□□□□ 0.78
SNX29P1-201ENST00000548357 WDR43Q15061 677 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNX29P1-201ENST00000548357 PPIP5K2O43314 1243 aa19.89■□□□□ 0.77
SNX29P1-201ENST00000548357 EIF6P56537 245 aaKnown RBP19.89■□□□□ 0.77
SNX29P1-201ENST00000548357 HDGFL1Q5TGJ6 251 aa19.89■□□□□ 0.77
SNX29P1-201ENST00000548357 THSD7BQ9C0I4 1608 aa19.88■□□□□ 0.77
SNX29P1-201ENST00000548357 CNTROBQ8N137 903 aa19.88■□□□□ 0.77
SNX29P1-201ENST00000548357 PRKRIP1Q9H875 184 aaPredicted RBP19.88■□□□□ 0.77
SNX29P1-201ENST00000548357 MBIPQ9NS73 344 aa19.88■□□□□ 0.77
SNX29P1-201ENST00000548357 TRMT112Q9UI30 125 aaKnown RBP19.88■□□□□ 0.77
SNX29P1-201ENST00000548357 TMEM88BA6NKF7 163 aa19.87■□□□□ 0.77
SNX29P1-201ENST00000548357 ATP5J2-PTCD1G3V325 749 aa19.87■□□□□ 0.77
SNX29P1-201ENST00000548357 VEGFBP49765 207 aa19.87■□□□□ 0.77
SNX29P1-201ENST00000548357 SH3TC1Q8TE82 1336 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 FOXN1O15353 648 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 CAPN15O75808 1086 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 DUSP27Q5VZP5 1158 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 NIM1KQ8IY84 436 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 ISCA1Q9BUE6 129 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 RTFDC1Q9BY42 306 aaPredicted RBP19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 MYH3P11055 1940 aa19.86■□□□□ 0.77
SNX29P1-201ENST00000548357 ZNF853P0CG23 659 aa19.85■□□□□ 0.77
SNX29P1-201ENST00000548357 PNMA8AQ86V59 439 aaPredicted RBP19.85■□□□□ 0.77
SNX29P1-201ENST00000548357 TNS4Q8IZW8 715 aa19.85■□□□□ 0.77
SNX29P1-201ENST00000548357 PLBD2Q8NHP8 589 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms