RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 CTCFP49711 727 aaPredicted RBP26.54■■□□□ 1.84
GATC-202ENST00000548171 NUTM1Q86Y26 1132 aa26.54■■□□□ 1.84
GATC-202ENST00000548171 CNTROBQ8N137 903 aa26.54■■□□□ 1.84
GATC-202ENST00000548171 NGEFQ8N5V2 710 aa26.54■■□□□ 1.84
GATC-202ENST00000548171 RPGRQ92834 1020 aaKnown RBP26.54■■□□□ 1.84
GATC-202ENST00000548171 RASSF10A6NK89 507 aa26.52■■□□□ 1.84
GATC-202ENST00000548171 EIF6P56537 245 aaKnown RBP26.52■■□□□ 1.84
GATC-202ENST00000548171 EIF4A1P60842 406 aaKnown RBP26.52■■□□□ 1.84
GATC-202ENST00000548171 MAP1SQ66K74 1059 aaPredicted RBP26.52■■□□□ 1.84
GATC-202ENST00000548171 RRP7AQ9Y3A4 280 aaKnown RBP26.52■■□□□ 1.84
GATC-202ENST00000548171 CRAMP1Q96RY5 1269 aa26.5■■□□□ 1.83
GATC-202ENST00000548171 WBP1LQ9NX94 342 aa26.5■■□□□ 1.83
GATC-202ENST00000548171 ERBB4Q15303 1308 aa26.49■■□□□ 1.83
GATC-202ENST00000548171 LMOD1P29536 600 aaPredicted RBP26.49■■□□□ 1.83
GATC-202ENST00000548171 DEFB115Q30KQ5 88 aa26.49■■□□□ 1.83
GATC-202ENST00000548171 TTLL7Q6ZT98 887 aa26.49■■□□□ 1.83
GATC-202ENST00000548171 RBM17Q96I25 401 aaKnown RBP26.49■■□□□ 1.83
GATC-202ENST00000548171 COL4A5P29400 1685 aa26.49■■□□□ 1.83
GATC-202ENST00000548171 TRPM7Q96QT4 1865 aa26.49■■□□□ 1.83
GATC-202ENST00000548171 LTBP1Q14766 1721 aa26.48■■□□□ 1.83
GATC-202ENST00000548171 UBN2Q6ZU65 1347 aa26.48■■□□□ 1.83
GATC-202ENST00000548171 ZNF34Q8IZ26 560 aa26.48■■□□□ 1.83
GATC-202ENST00000548171 GJA3Q9Y6H8 435 aa26.48■■□□□ 1.83
GATC-202ENST00000548171 MYL6BP14649 208 aa26.47■■□□□ 1.83
GATC-202ENST00000548171 GPTP24298 496 aa26.47■■□□□ 1.83
GATC-202ENST00000548171 NFE2L2Q16236 605 aa26.47■■□□□ 1.83
GATC-202ENST00000548171 LARGE2Q8N3Y3 721 aa26.47■■□□□ 1.83
GATC-202ENST00000548171 PLEKHF1Q96S99 279 aa26.47■■□□□ 1.83
GATC-202ENST00000548171 PNNQ9H307 717 aaKnown RBP26.47■■□□□ 1.83
GATC-202ENST00000548171 ZBTB3Q9H5J0 574 aa26.47■■□□□ 1.83
GATC-202ENST00000548171 SUSD4Q5VX71 490 aa26.46■■□□□ 1.83
GATC-202ENST00000548171 PPEF1O14829 653 aaPredicted RBP26.45■■□□□ 1.82
GATC-202ENST00000548171 GIGYF2Q6Y7W6 1299 aaKnown RBP26.45■■□□□ 1.82
GATC-202ENST00000548171 PPP1R42Q7Z4L9 355 aa26.45■■□□□ 1.82
GATC-202ENST00000548171 DDX21Q9NR30 783 aaKnown RBP eCLIP26.45■■□□□ 1.82
GATC-202ENST00000548171 ABT1Q9ULW3 272 aaKnown RBP26.45■■□□□ 1.82
GATC-202ENST00000548171 NTSR2O95665 410 aa26.44■■□□□ 1.82
GATC-202ENST00000548171 MAP2K1Q02750 393 aaPredicted RBP26.44■■□□□ 1.82
GATC-202ENST00000548171 TMX4Q9H1E5 349 aaPredicted RBP26.44■■□□□ 1.82
GATC-202ENST00000548171 WDR33Q9C0J8 1336 aaKnown RBP26.43■■□□□ 1.82
GATC-202ENST00000548171 MAPK8IP3Q9UPT6 1336 aa26.43■■□□□ 1.82
GATC-202ENST00000548171 SCNN1DP51172 638 aa26.43■■□□□ 1.82
GATC-202ENST00000548171 PARP10Q53GL7 1025 aa26.43■■□□□ 1.82
GATC-202ENST00000548171 USP50Q70EL3 339 aaPredicted RBP26.43■■□□□ 1.82
GATC-202ENST00000548171 THUMPD2Q9BTF0 503 aaKnown RBP26.43■■□□□ 1.82
GATC-202ENST00000548171 ANKRD36CQ5JPF3 1778 aa26.43■■□□□ 1.82
GATC-202ENST00000548171 THSD7BQ9C0I4 1608 aa26.43■■□□□ 1.82
GATC-202ENST00000548171 LBX1P52954 281 aa26.42■■□□□ 1.82
GATC-202ENST00000548171 NIM1KQ8IY84 436 aa26.42■■□□□ 1.82
GATC-202ENST00000548171 NLRP3Q96P20 1036 aa26.42■■□□□ 1.82
GATC-202ENST00000548171 VPS33BQ9H267 617 aa26.42■■□□□ 1.82
GATC-202ENST00000548171 EPS15P42566 896 aa26.41■■□□□ 1.82
GATC-202ENST00000548171 LAMB2P55268 1798 aa26.39■■□□□ 1.82
GATC-202ENST00000548171 PPIP5K2O43314 1243 aa26.39■■□□□ 1.82
GATC-202ENST00000548171 SLC10A5Q5PT55 438 aa26.39■■□□□ 1.82
GATC-202ENST00000548171 ATP6V0A2Q9Y487 856 aa26.39■■□□□ 1.82
GATC-202ENST00000548171 TCERG1O14776 1098 aaKnown RBP26.38■■□□□ 1.81
GATC-202ENST00000548171 ECE1P42892 770 aa26.38■■□□□ 1.81
GATC-202ENST00000548171 C3orf67Q6ZVT6 689 aa26.38■■□□□ 1.81
GATC-202ENST00000548171 SUPT20HQ8NEM7 779 aa26.38■■□□□ 1.81
GATC-202ENST00000548171 UTP14AQ9BVJ6 771 aaKnown RBP26.38■■□□□ 1.81
GATC-202ENST00000548171 HSPA8P11142 646 aaKnown RBP26.37■■□□□ 1.81
GATC-202ENST00000548171 TSPYL4Q9UJ04 414 aa26.37■■□□□ 1.81
GATC-202ENST00000548171 LRP10Q7Z4F1 713 aa26.36■■□□□ 1.81
GATC-202ENST00000548171 BABAM1Q9NWV8 329 aa26.36■■□□□ 1.81
GATC-202ENST00000548171 RTFDC1Q9BY42 306 aaPredicted RBP26.35■■□□□ 1.81
GATC-202ENST00000548171 ADARB2Q9NS39 739 aaKnown RBP26.35■■□□□ 1.81
GATC-202ENST00000548171 GPRC5DQ9NZD1 345 aa26.35■■□□□ 1.81
GATC-202ENST00000548171 PDIA6Q15084 440 aa26.34■■□□□ 1.81
GATC-202ENST00000548171 AOC3Q16853 763 aa26.34■■□□□ 1.81
GATC-202ENST00000548171 CAPNS2Q96L46 248 aa26.34■■□□□ 1.81
GATC-202ENST00000548171 BEGAINQ9BUH8 593 aa26.34■■□□□ 1.81
GATC-202ENST00000548171 ZNRF3Q9ULT6 936 aa26.34■■□□□ 1.81
GATC-202ENST00000548171 ABCC4O15439 1325 aa26.34■■□□□ 1.81
GATC-202ENST00000548171 BBOX1O75936 387 aa26.33■■□□□ 1.81
GATC-202ENST00000548171 HSP90AB3PQ58FF7 597 aa26.33■■□□□ 1.81
GATC-202ENST00000548171 PAXIP1Q6ZW49 1069 aaPredicted RBP26.33■■□□□ 1.81
GATC-202ENST00000548171 EIF2S2P20042 333 aaKnown RBP26.32■■□□□ 1.8
GATC-202ENST00000548171 CST9Q5W186 159 aa26.32■■□□□ 1.8
GATC-202ENST00000548171 SLC51AQ86UW1 340 aa26.32■■□□□ 1.8
GATC-202ENST00000548171 TLL2Q9Y6L7 1015 aa26.32■■□□□ 1.8
GATC-202ENST00000548171 CDHR2Q9BYE9 1310 aa26.32■■□□□ 1.8
GATC-202ENST00000548171 CXCL9Q07325 125 aa26.31■■□□□ 1.8
GATC-202ENST00000548171 SP8Q8IXZ3 490 aa26.31■■□□□ 1.8
GATC-202ENST00000548171 GPR101Q96P66 508 aaPredicted RBP26.31■■□□□ 1.8
GATC-202ENST00000548171 TRAF5O00463 557 aa26.3■■□□□ 1.8
GATC-202ENST00000548171 RIPK4P57078 832 aa26.3■■□□□ 1.8
GATC-202ENST00000548171 FMR1Q06787 632 aaKnown RBP eCLIP26.3■■□□□ 1.8
GATC-202ENST00000548171 DPP8Q6V1X1 898 aaPredicted RBP26.3■■□□□ 1.8
GATC-202ENST00000548171 LMOD3Q0VAK6 560 aa26.29■■□□□ 1.8
GATC-202ENST00000548171 PROSER3Q2NL68 480 aa26.29■■□□□ 1.8
GATC-202ENST00000548171 ABHD8Q96I13 439 aa26.29■■□□□ 1.8
GATC-202ENST00000548171 MAP2K2P36507 400 aa26.28■■□□□ 1.8
GATC-202ENST00000548171 KIAA2012Q0VF49 1180 aa26.28■■□□□ 1.8
GATC-202ENST00000548171 CYP4F22Q6NT55 531 aa26.28■■□□□ 1.8
GATC-202ENST00000548171 MPNDQ8N594 471 aa26.28■■□□□ 1.8
GATC-202ENST00000548171 TAF1P21675 1872 aa26.28■■□□□ 1.8
GATC-202ENST00000548171 GMPSP49915 693 aaPredicted RBP26.27■■□□□ 1.8
GATC-202ENST00000548171 CIAPIN1Q6FI81 312 aa26.27■■□□□ 1.8
GATC-202ENST00000548171 DDX46Q7L014 1031 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms