RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 NID1P14543 1247 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 CLDN10P78369 228 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 GLMNQ92990 594 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 BHMTQ93088 406 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 SUSD3Q96L08 255 aa8.11□□□□□ -1.11
SCAF11-210ENST00000547654 UBE2OQ9C0C9 1292 aaKnown RBP8.11□□□□□ -1.11
SCAF11-210ENST00000547654 ATP9BO43861 1147 aa8.1□□□□□ -1.11
SCAF11-210ENST00000547654 PPP1R12BO60237 982 aaPredicted RBP8.1□□□□□ -1.11
SCAF11-210ENST00000547654 KCNQ4P56696 695 aa8.1□□□□□ -1.11
SCAF11-210ENST00000547654 COL9A3Q14050 684 aaPredicted RBP8.1□□□□□ -1.11
SCAF11-210ENST00000547654 GRIK4Q16099 956 aa8.1□□□□□ -1.11
SCAF11-210ENST00000547654 OGFOD1Q8N543 542 aa8.1□□□□□ -1.11
SCAF11-210ENST00000547654 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
SCAF11-210ENST00000547654 RAC1P63000 192 aa8.09□□□□□ -1.11
SCAF11-210ENST00000547654 HIF1AQ16665 826 aa8.09□□□□□ -1.11
SCAF11-210ENST00000547654 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
SCAF11-210ENST00000547654 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
SCAF11-210ENST00000547654 ZNF594Q96JF6 807 aaPredicted RBP8.09□□□□□ -1.11
SCAF11-210ENST00000547654 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
SCAF11-210ENST00000547654 C9orf172C9J069 976 aa8.08□□□□□ -1.12
SCAF11-210ENST00000547654 M0R2N6 131 aa8.08□□□□□ -1.12
SCAF11-210ENST00000547654 POTEAQ6S8J7 498 aa8.08□□□□□ -1.12
SCAF11-210ENST00000547654 TSEN2Q8NCE0 465 aaKnown RBP8.08□□□□□ -1.12
SCAF11-210ENST00000547654 JPH1Q9HDC5 661 aaPredicted RBP8.08□□□□□ -1.12
SCAF11-210ENST00000547654 KANK4Q5T7N3 995 aaPredicted RBP8.07□□□□□ -1.12
SCAF11-210ENST00000547654 C20orf204Q6ZNR8 217 aa8.07□□□□□ -1.12
SCAF11-210ENST00000547654 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
SCAF11-210ENST00000547654 GOLGA2P5Q9HBQ8 144 aa8.07□□□□□ -1.12
SCAF11-210ENST00000547654 SLC6A14Q9UN76 642 aa8.07□□□□□ -1.12
SCAF11-210ENST00000547654 MAFBQ9Y5Q3 323 aaPredicted RBP8.07□□□□□ -1.12
SCAF11-210ENST00000547654 ELNP15502 786 aa8.06□□□□□ -1.12
SCAF11-210ENST00000547654 PRSS36Q5K4E3 855 aa8.06□□□□□ -1.12
SCAF11-210ENST00000547654 BTLAQ7Z6A9 289 aa8.06□□□□□ -1.12
SCAF11-210ENST00000547654 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
SCAF11-210ENST00000547654 SIX5Q8N196 739 aa8.06□□□□□ -1.12
SCAF11-210ENST00000547654 NGLY1Q96IV0 654 aa8.06□□□□□ -1.12
SCAF11-210ENST00000547654 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
SCAF11-210ENST00000547654 A0A0A0MRY4 1105 aa8.05□□□□□ -1.12
SCAF11-210ENST00000547654 SRPK2P78362 688 aaKnown RBP8.05□□□□□ -1.12
SCAF11-210ENST00000547654 MBTPS1Q14703 1052 aa8.05□□□□□ -1.12
SCAF11-210ENST00000547654 FOXD4L6Q3SYB3 417 aaPredicted RBP8.05□□□□□ -1.12
SCAF11-210ENST00000547654 CFAP70Q5T0N1 1121 aa8.05□□□□□ -1.12
SCAF11-210ENST00000547654 FOXD4L3Q6VB84 417 aaPredicted RBP8.05□□□□□ -1.12
SCAF11-210ENST00000547654 PPP1R12CQ9BZL4 782 aa8.05□□□□□ -1.12
SCAF11-210ENST00000547654 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
SCAF11-210ENST00000547654 TFIP11Q9UBB9 837 aaKnown RBP8.05□□□□□ -1.12
SCAF11-210ENST00000547654 NRG1Q02297 640 aaPredicted RBP8.04□□□□□ -1.12
SCAF11-210ENST00000547654 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
SCAF11-210ENST00000547654 TXNRD3Q86VQ6 643 aa8.04□□□□□ -1.12
SCAF11-210ENST00000547654 CHMP7Q8WUX9 453 aaPredicted RBP8.04□□□□□ -1.12
SCAF11-210ENST00000547654 NUDT8Q8WV74 236 aa8.04□□□□□ -1.12
SCAF11-210ENST00000547654 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
SCAF11-210ENST00000547654 ARTNQ5T4W7 220 aa8.03□□□□□ -1.12
SCAF11-210ENST00000547654 LCE1DQ5T752 114 aa8.03□□□□□ -1.12
SCAF11-210ENST00000547654 SCG3Q8WXD2 468 aaKnown RBP8.03□□□□□ -1.12
SCAF11-210ENST00000547654 DNAJB12Q9NXW2 375 aaKnown RBP8.03□□□□□ -1.12
SCAF11-210ENST00000547654 USP21Q9UK80 565 aa8.03□□□□□ -1.12
SCAF11-210ENST00000547654 C21orf2O43822 256 aa8.02□□□□□ -1.13
SCAF11-210ENST00000547654 SELPP16109 830 aa8.02□□□□□ -1.13
SCAF11-210ENST00000547654 PSAPL1Q6NUJ1 521 aa8.02□□□□□ -1.13
SCAF11-210ENST00000547654 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
SCAF11-210ENST00000547654 C14orf37Q86TY3 774 aa8.02□□□□□ -1.13
SCAF11-210ENST00000547654 STAG2Q8N3U4 1231 aa8.02□□□□□ -1.13
SCAF11-210ENST00000547654 C2orf49Q9BVC5 232 aaPredicted RBP8.02□□□□□ -1.13
SCAF11-210ENST00000547654 ATAD2Q6PL18 1390 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 NFKB1P19838 968 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 RASA1P20936 1047 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 IER5Q5VY09 327 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 SHISA2Q6UWI4 295 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 HOMEZQ8IX15 550 aa8.01□□□□□ -1.13
SCAF11-210ENST00000547654 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-210ENST00000547654 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-210ENST00000547654 RGS9O75916 674 aaPredicted RBP8□□□□□ -1.13
SCAF11-210ENST00000547654 EPB42P16452 691 aa8□□□□□ -1.13
SCAF11-210ENST00000547654 AFF1P51825 1210 aaKnown RBP8□□□□□ -1.13
SCAF11-210ENST00000547654 SEC13P55735 322 aa8□□□□□ -1.13
SCAF11-210ENST00000547654 CCINQ13939 588 aa8□□□□□ -1.13
SCAF11-210ENST00000547654 RTN1Q16799 776 aa8□□□□□ -1.13
SCAF11-210ENST00000547654 GAS2L2Q8NHY3 880 aa8□□□□□ -1.13
SCAF11-210ENST00000547654 TP53INP1Q96A56 240 aa8□□□□□ -1.13
SCAF11-210ENST00000547654 NAGPAQ9UK23 515 aa8□□□□□ -1.13
SCAF11-210ENST00000547654 TGFBR3LH3BV60 316 aa7.99□□□□□ -1.13
SCAF11-210ENST00000547654 PTK7Q13308 1070 aa7.99□□□□□ -1.13
SCAF11-210ENST00000547654 CRTC2Q53ET0 693 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-210ENST00000547654 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-210ENST00000547654 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-210ENST00000547654 PCSK7Q16549 785 aa7.98□□□□□ -1.13
SCAF11-210ENST00000547654 FAM35AQ86V20 835 aa7.98□□□□□ -1.13
SCAF11-210ENST00000547654 DMRTC2Q8IXT2 367 aaPredicted RBP7.98□□□□□ -1.13
SCAF11-210ENST00000547654 CALR3Q96L12 384 aaKnown RBP7.98□□□□□ -1.13
SCAF11-210ENST00000547654 HINFPQ9BQA5 517 aa7.98□□□□□ -1.13
SCAF11-210ENST00000547654 GSX2Q9BZM3 304 aa7.98□□□□□ -1.13
SCAF11-210ENST00000547654 ZMYND15Q9H091 742 aa7.98□□□□□ -1.13
SCAF11-210ENST00000547654 LRP8Q14114 963 aa7.97□□□□□ -1.13
SCAF11-210ENST00000547654 LARP1Q6PKG0 1096 aaKnown RBP7.97□□□□□ -1.13
SCAF11-210ENST00000547654 CPB1P15086 417 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms