RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 C4BP0C0L5 1744 aa20.7■□□□□ 0.91
LETMD1-210ENST00000547555 ITPK1Q13572 414 aa20.7■□□□□ 0.91
LETMD1-210ENST00000547555 EZH2Q15910 746 aaKnown RBP20.7■□□□□ 0.91
LETMD1-210ENST00000547555 KRT24Q2M2I5 525 aa20.7■□□□□ 0.91
LETMD1-210ENST00000547555 UVSSAQ2YD98 709 aa20.7■□□□□ 0.91
LETMD1-210ENST00000547555 SIRT2Q8IXJ6 389 aa20.7■□□□□ 0.91
LETMD1-210ENST00000547555 SOS1Q07889 1333 aaPredicted RBP20.7■□□□□ 0.9
LETMD1-210ENST00000547555 HOXB7P09629 217 aa20.7■□□□□ 0.9
LETMD1-210ENST00000547555 ATP6V1AP38606 617 aa20.7■□□□□ 0.9
LETMD1-210ENST00000547555 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
LETMD1-210ENST00000547555 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.9
LETMD1-210ENST00000547555 OSBPL3Q9H4L5 887 aa20.7■□□□□ 0.9
LETMD1-210ENST00000547555 MCTP1Q6DN14 999 aa20.69■□□□□ 0.9
LETMD1-210ENST00000547555 SASS6Q6UVJ0 657 aa20.69■□□□□ 0.9
LETMD1-210ENST00000547555 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
LETMD1-210ENST00000547555 ANAPC15P60006 121 aa20.68■□□□□ 0.9
LETMD1-210ENST00000547555 DNAJC10Q8IXB1 793 aa20.68■□□□□ 0.9
LETMD1-210ENST00000547555 TEX13AQ9BXU3 409 aaPredicted RBP20.68■□□□□ 0.9
LETMD1-210ENST00000547555 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
LETMD1-210ENST00000547555 KCNQ4P56696 695 aa20.67■□□□□ 0.9
LETMD1-210ENST00000547555 GSPT1P15170 499 aaKnown RBP20.67■□□□□ 0.9
LETMD1-210ENST00000547555 CAVIN1Q6NZI2 390 aaKnown RBP20.67■□□□□ 0.9
LETMD1-210ENST00000547555 SMAP1Q8IYB5 467 aaPredicted RBP20.67■□□□□ 0.9
LETMD1-210ENST00000547555 TSPYL6Q8N831 410 aa20.67■□□□□ 0.9
LETMD1-210ENST00000547555 LINC00116Q8NCU8 138 aa20.67■□□□□ 0.9
LETMD1-210ENST00000547555 PTPRCP08575 1304 aa20.66■□□□□ 0.9
LETMD1-210ENST00000547555 HMGB2P26583 209 aaKnown RBP20.66■□□□□ 0.9
LETMD1-210ENST00000547555 UBR3Q6ZT12 1888 aa20.66■□□□□ 0.9
LETMD1-210ENST00000547555 AK9Q5TCS8 1911 aa20.66■□□□□ 0.9
LETMD1-210ENST00000547555 CYP19A1P11511 503 aaPredicted RBP20.65■□□□□ 0.9
LETMD1-210ENST00000547555 HMGN5P82970 282 aaKnown RBP20.65■□□□□ 0.9
LETMD1-210ENST00000547555 RBSNQ9H1K0 784 aa20.65■□□□□ 0.9
LETMD1-210ENST00000547555 USP16Q9Y5T5 823 aa20.65■□□□□ 0.9
LETMD1-210ENST00000547555 TUBGCP6Q96RT7 1819 aa20.65■□□□□ 0.9
LETMD1-210ENST00000547555 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
LETMD1-210ENST00000547555 CNTNAP4Q9C0A0 1308 aa20.65■□□□□ 0.9
LETMD1-210ENST00000547555 TWISTNBQ3B726 338 aaPredicted RBP20.64■□□□□ 0.9
LETMD1-210ENST00000547555 PRIMPOLQ96LW4 560 aa20.64■□□□□ 0.9
LETMD1-210ENST00000547555 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
LETMD1-210ENST00000547555 ERC2O15083 957 aa20.64■□□□□ 0.89
LETMD1-210ENST00000547555 HMMRO75330 724 aa20.64■□□□□ 0.89
LETMD1-210ENST00000547555 LETM1O95202 739 aaPredicted RBP20.64■□□□□ 0.89
LETMD1-210ENST00000547555 STARD3NLO95772 234 aa20.64■□□□□ 0.89
LETMD1-210ENST00000547555 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
LETMD1-210ENST00000547555 CUL4AQ13619 759 aa20.63■□□□□ 0.89
LETMD1-210ENST00000547555 ELL2O00472 640 aaPredicted RBP20.62■□□□□ 0.89
LETMD1-210ENST00000547555 RC3H1Q5TC82 1133 aaKnown RBP20.62■□□□□ 0.89
LETMD1-210ENST00000547555 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.62■□□□□ 0.89
LETMD1-210ENST00000547555 CRKLP46109 303 aaKnown RBP20.61■□□□□ 0.89
LETMD1-210ENST00000547555 SOCS7O14512 581 aa20.61■□□□□ 0.89
LETMD1-210ENST00000547555 MCCP23508 829 aa20.61■□□□□ 0.89
LETMD1-210ENST00000547555 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
LETMD1-210ENST00000547555 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
LETMD1-210ENST00000547555 BRD1O95696 1058 aa20.6■□□□□ 0.89
LETMD1-210ENST00000547555 AKT1S1Q96B36 256 aa20.6■□□□□ 0.89
LETMD1-210ENST00000547555 CCDC87Q9NVE4 849 aa20.6■□□□□ 0.89
LETMD1-210ENST00000547555 R3HCC1Q9Y3T6 440 aaKnown RBP20.6■□□□□ 0.89
LETMD1-210ENST00000547555 UQCRHLA0A096LP55 91 aa20.59■□□□□ 0.89
LETMD1-210ENST00000547555 UQCRHP07919 91 aa20.59■□□□□ 0.89
LETMD1-210ENST00000547555 GPT2Q8TD30 523 aa20.59■□□□□ 0.89
LETMD1-210ENST00000547555 CHMP4AQ9BY43 222 aa20.59■□□□□ 0.89
LETMD1-210ENST00000547555 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.89
LETMD1-210ENST00000547555 EIF2S2P20042 333 aaKnown RBP20.58■□□□□ 0.89
LETMD1-210ENST00000547555 GTF2F1P35269 517 aaKnown RBP eCLIP20.58■□□□□ 0.89
LETMD1-210ENST00000547555 KIAA2012Q0VF49 1180 aa20.58■□□□□ 0.89
LETMD1-210ENST00000547555 ZBTB1Q9Y2K1 713 aa20.58■□□□□ 0.89
LETMD1-210ENST00000547555 A1BGP04217 495 aa20.58■□□□□ 0.88
LETMD1-210ENST00000547555 TPM3P06753 285 aa20.58■□□□□ 0.88
LETMD1-210ENST00000547555 C4AP0C0L4 1744 aa20.58■□□□□ 0.88
LETMD1-210ENST00000547555 ZNF827Q17R98 1081 aa20.58■□□□□ 0.88
LETMD1-210ENST00000547555 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 NCLP19338 710 aaKnown RBP20.57■□□□□ 0.88
LETMD1-210ENST00000547555 SDSP20132 328 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 PDIA6Q15084 440 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 CCDC30Q5VVM6 783 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
LETMD1-210ENST00000547555 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 TMEM87AQ8NBN3 555 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 TSPY26PQ9H489 355 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 ZDHHC9Q9Y397 364 aa20.57■□□□□ 0.88
LETMD1-210ENST00000547555 PDIA4P13667 645 aaKnown RBP20.56■□□□□ 0.88
LETMD1-210ENST00000547555 UTP14CQ5TAP6 766 aaKnown RBP20.56■□□□□ 0.88
LETMD1-210ENST00000547555 LRP10Q7Z4F1 713 aa20.56■□□□□ 0.88
LETMD1-210ENST00000547555 AK7Q96M32 723 aa20.56■□□□□ 0.88
LETMD1-210ENST00000547555 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
LETMD1-210ENST00000547555 RPS6KA4O75676 772 aa20.55■□□□□ 0.88
LETMD1-210ENST00000547555 CEP85Q6P2H3 762 aa20.55■□□□□ 0.88
LETMD1-210ENST00000547555 MYRIPQ8NFW9 859 aa20.55■□□□□ 0.88
LETMD1-210ENST00000547555 NECTIN2Q92692 538 aa20.55■□□□□ 0.88
LETMD1-210ENST00000547555 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
LETMD1-210ENST00000547555 DBF4Q9UBU7 674 aaPredicted RBP20.55■□□□□ 0.88
LETMD1-210ENST00000547555 GNPATO15228 680 aa20.54■□□□□ 0.88
LETMD1-210ENST00000547555 IL6STP40189 918 aaPredicted RBP20.54■□□□□ 0.88
LETMD1-210ENST00000547555 TMEM63CQ9P1W3 806 aa20.54■□□□□ 0.88
LETMD1-210ENST00000547555 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
LETMD1-210ENST00000547555 AOX1Q06278 1338 aa20.54■□□□□ 0.88
LETMD1-210ENST00000547555 EIF5P55010 431 aaKnown RBP20.54■□□□□ 0.88
LETMD1-210ENST00000547555 SLC15A2Q16348 729 aa20.54■□□□□ 0.88
LETMD1-210ENST00000547555 PROSER3Q2NL68 480 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms