RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 NYXQ9GZU5 481 aa15.55■□□□□ 0.08
HDAC7-226ENST00000547259 DDNO94850 711 aaPredicted RBP15.54■□□□□ 0.08
HDAC7-226ENST00000547259 FKBP4Q02790 459 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDAC7-226ENST00000547259 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
HDAC7-226ENST00000547259 COL13A1Q5TAT6 717 aaPredicted RBP15.54■□□□□ 0.08
HDAC7-226ENST00000547259 DUSP27Q5VZP5 1158 aa15.54■□□□□ 0.08
HDAC7-226ENST00000547259 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
HDAC7-226ENST00000547259 TRMT2AQ8IZ69 625 aaKnown RBP15.54■□□□□ 0.08
HDAC7-226ENST00000547259 TNS4Q8IZW8 715 aa15.54■□□□□ 0.08
HDAC7-226ENST00000547259 L3MBTL3Q96JM7 780 aaPredicted RBP15.54■□□□□ 0.08
HDAC7-226ENST00000547259 EIF4A1P60842 406 aaKnown RBP15.53■□□□□ 0.08
HDAC7-226ENST00000547259 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
HDAC7-226ENST00000547259 CC2D2BQ6DHV5 1058 aa15.53■□□□□ 0.08
HDAC7-226ENST00000547259 C7orf43Q8WVR3 580 aa15.53■□□□□ 0.08
HDAC7-226ENST00000547259 ERVV-1B6SEH8 477 aa15.52■□□□□ 0.08
HDAC7-226ENST00000547259 HSPA1AP0DMV8 641 aaKnown RBP15.52■□□□□ 0.08
HDAC7-226ENST00000547259 HSPA1BP0DMV9 641 aaKnown RBP15.52■□□□□ 0.08
HDAC7-226ENST00000547259 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
HDAC7-226ENST00000547259 KRT24Q2M2I5 525 aa15.51■□□□□ 0.07
HDAC7-226ENST00000547259 PNMA8AQ86V59 439 aaPredicted RBP15.51■□□□□ 0.07
HDAC7-226ENST00000547259 PRAMEF22A3QJZ6 481 aa15.5■□□□□ 0.07
HDAC7-226ENST00000547259 NBPF26B4DH59 902 aa15.5■□□□□ 0.07
HDAC7-226ENST00000547259 NBPF10Q6P3W6 841 aaKnown RBP15.5■□□□□ 0.07
HDAC7-226ENST00000547259 KIF6Q6ZMV9 814 aa15.5■□□□□ 0.07
HDAC7-226ENST00000547259 NBPF15Q8N660 670 aa15.5■□□□□ 0.07
HDAC7-226ENST00000547259 C8orf58Q8NAV2 365 aa15.5■□□□□ 0.07
HDAC7-226ENST00000547259 JDP2Q8WYK2 163 aa15.5■□□□□ 0.07
HDAC7-226ENST00000547259 TAF1DQ9H5J8 278 aaPredicted RBP15.5■□□□□ 0.07
HDAC7-226ENST00000547259 HACL1Q9UJ83 578 aa15.5■□□□□ 0.07
HDAC7-226ENST00000547259 ELL2O00472 640 aaPredicted RBP15.49■□□□□ 0.07
HDAC7-226ENST00000547259 TWISTNBQ3B726 338 aaPredicted RBP15.49■□□□□ 0.07
HDAC7-226ENST00000547259 PSMD1Q99460 953 aa15.49■□□□□ 0.07
HDAC7-226ENST00000547259 TMX4Q9H1E5 349 aaPredicted RBP15.49■□□□□ 0.07
HDAC7-226ENST00000547259 NUP98P52948 1817 aa15.49■□□□□ 0.07
HDAC7-226ENST00000547259 IARSP41252 1262 aaKnown RBP15.48■□□□□ 0.07
HDAC7-226ENST00000547259 TSPYL6Q8N831 410 aa15.48■□□□□ 0.07
HDAC7-226ENST00000547259 ERBB4Q15303 1308 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 TMEM88BA6NKF7 163 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 FAM177BA6PVY3 158 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 HOXB7P09629 217 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 CRY2Q49AN0 593 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 GPC2Q8N158 579 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 SYNE4Q8N205 404 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 RPGRQ92834 1020 aaKnown RBP15.47■□□□□ 0.07
HDAC7-226ENST00000547259 ZNF277Q9NRM2 450 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-226ENST00000547259 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 CACNA1FO60840 1977 aa15.47■□□□□ 0.07
HDAC7-226ENST00000547259 IBTKQ9P2D0 1353 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-226ENST00000547259 MAP3K15Q6ZN16 1313 aa15.46■□□□□ 0.07
HDAC7-226ENST00000547259 PASKQ96RG2 1323 aa15.46■□□□□ 0.07
HDAC7-226ENST00000547259 FZD9O00144 591 aa15.46■□□□□ 0.07
HDAC7-226ENST00000547259 CT47B1P0C2W7 299 aaPredicted RBP15.46■□□□□ 0.07
HDAC7-226ENST00000547259 EPHX2P34913 555 aa15.46■□□□□ 0.07
HDAC7-226ENST00000547259 EIF6P56537 245 aaKnown RBP15.46■□□□□ 0.07
HDAC7-226ENST00000547259 HLFQ16534 295 aa15.46■□□□□ 0.07
HDAC7-226ENST00000547259 EAPPQ56P03 285 aaPredicted RBP15.46■□□□□ 0.07
HDAC7-226ENST00000547259 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
HDAC7-226ENST00000547259 MKRN1Q9UHC7 482 aaKnown RBP15.46■□□□□ 0.07
HDAC7-226ENST00000547259 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
HDAC7-226ENST00000547259 EIF2S2P20042 333 aaKnown RBP15.45■□□□□ 0.06
HDAC7-226ENST00000547259 HOXA10P31260 410 aaPredicted RBP15.45■□□□□ 0.06
HDAC7-226ENST00000547259 HDGFL1Q5TGJ6 251 aa15.45■□□□□ 0.06
HDAC7-226ENST00000547259 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
HDAC7-226ENST00000547259 CNTNAP1P78357 1384 aa15.45■□□□□ 0.06
HDAC7-226ENST00000547259 VAMP4O75379 141 aa15.44■□□□□ 0.06
HDAC7-226ENST00000547259 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
HDAC7-226ENST00000547259 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
HDAC7-226ENST00000547259 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
HDAC7-226ENST00000547259 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
HDAC7-226ENST00000547259 PARP10Q53GL7 1025 aa15.44■□□□□ 0.06
HDAC7-226ENST00000547259 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
HDAC7-226ENST00000547259 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
HDAC7-226ENST00000547259 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
HDAC7-226ENST00000547259 VPS33BQ9H267 617 aa15.44■□□□□ 0.06
HDAC7-226ENST00000547259 ITGBL1O95965 494 aaPredicted RBP15.43■□□□□ 0.06
HDAC7-226ENST00000547259 CHMP4AQ9BY43 222 aa15.43■□□□□ 0.06
HDAC7-226ENST00000547259 PRDM10Q9NQV6 1147 aa15.43■□□□□ 0.06
HDAC7-226ENST00000547259 CAPN15O75808 1086 aa15.42■□□□□ 0.06
HDAC7-226ENST00000547259 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
HDAC7-226ENST00000547259 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
HDAC7-226ENST00000547259 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
HDAC7-226ENST00000547259 ZNF428Q96B54 188 aa15.42■□□□□ 0.06
HDAC7-226ENST00000547259 NLRP3Q96P20 1036 aa15.42■□□□□ 0.06
HDAC7-226ENST00000547259 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
HDAC7-226ENST00000547259 ZNF541Q9H0D2 1346 aa15.42■□□□□ 0.06
HDAC7-226ENST00000547259 TCERG1O14776 1098 aaKnown RBP15.41■□□□□ 0.06
HDAC7-226ENST00000547259 MYL6BP14649 208 aa15.41■□□□□ 0.06
HDAC7-226ENST00000547259 CTCFP49711 727 aaPredicted RBP15.41■□□□□ 0.06
HDAC7-226ENST00000547259 NUTM1Q86Y26 1132 aa15.41■□□□□ 0.06
HDAC7-226ENST00000547259 LARGE2Q8N3Y3 721 aa15.41■□□□□ 0.06
HDAC7-226ENST00000547259 STK31Q9BXU1 1019 aa15.41■□□□□ 0.06
HDAC7-226ENST00000547259 DEFB115Q30KQ5 88 aa15.4■□□□□ 0.06
HDAC7-226ENST00000547259 HSP90AB3PQ58FF7 597 aa15.4■□□□□ 0.06
HDAC7-226ENST00000547259 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
HDAC7-226ENST00000547259 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
HDAC7-226ENST00000547259 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
HDAC7-226ENST00000547259 SMC4Q9NTJ3 1288 aa15.4■□□□□ 0.06
HDAC7-226ENST00000547259 RASSF10A6NK89 507 aa15.39■□□□□ 0.05
HDAC7-226ENST00000547259 PPEF1O14829 653 aaPredicted RBP15.39■□□□□ 0.05
HDAC7-226ENST00000547259 GPTP24298 496 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms