RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 NPR1P16066 1061 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 GPTP24298 496 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 ERFEQ4G0M1 354 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 SUSD4Q5VX71 490 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 MBIPQ9NS73 344 aa13.47□□□□□ -0.25
BEST3-208ENST00000547208 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
BEST3-208ENST00000547208 LAS1LQ9Y4W2 734 aaKnown RBP13.47□□□□□ -0.25
BEST3-208ENST00000547208 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
BEST3-208ENST00000547208 NTSR2O95665 410 aa13.46□□□□□ -0.25
BEST3-208ENST00000547208 HOXB7P09629 217 aa13.46□□□□□ -0.25
BEST3-208ENST00000547208 JMYQ8N9B5 988 aa13.46□□□□□ -0.25
BEST3-208ENST00000547208 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
BEST3-208ENST00000547208 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.25
BEST3-208ENST00000547208 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
BEST3-208ENST00000547208 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
BEST3-208ENST00000547208 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
BEST3-208ENST00000547208 TAOK3Q9H2K8 898 aa13.45□□□□□ -0.26
BEST3-208ENST00000547208 CHPF2Q9P2E5 772 aa13.45□□□□□ -0.26
BEST3-208ENST00000547208 GLTPD2A6NH11 291 aa13.44□□□□□ -0.26
BEST3-208ENST00000547208 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
BEST3-208ENST00000547208 RBM46Q8TBY0 533 aaKnown RBP13.44□□□□□ -0.26
BEST3-208ENST00000547208 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
BEST3-208ENST00000547208 SCN4AP35499 1836 aa13.43□□□□□ -0.26
BEST3-208ENST00000547208 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
BEST3-208ENST00000547208 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
BEST3-208ENST00000547208 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
BEST3-208ENST00000547208 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
BEST3-208ENST00000547208 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
BEST3-208ENST00000547208 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
BEST3-208ENST00000547208 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
BEST3-208ENST00000547208 C3orf67Q6ZVT6 689 aa13.43□□□□□ -0.26
BEST3-208ENST00000547208 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
BEST3-208ENST00000547208 CACNA1FO60840 1977 aa13.42□□□□□ -0.26
BEST3-208ENST00000547208 ALDH1B1P30837 517 aa13.42□□□□□ -0.26
BEST3-208ENST00000547208 CCDC93Q567U6 631 aa13.42□□□□□ -0.26
BEST3-208ENST00000547208 TNS4Q8IZW8 715 aa13.42□□□□□ -0.26
BEST3-208ENST00000547208 COL4A5P29400 1685 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 POTECB2RU33 542 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 GNAI1P63096 354 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 PPP1R42Q7Z4L9 355 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 NLRP10Q86W26 655 aa13.41□□□□□ -0.26
BEST3-208ENST00000547208 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
BEST3-208ENST00000547208 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
BEST3-208ENST00000547208 FKBP4Q02790 459 aaKnown RBP eCLIP13.4□□□□□ -0.26
BEST3-208ENST00000547208 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.26
BEST3-208ENST00000547208 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
BEST3-208ENST00000547208 HSP90AB3PQ58FF7 597 aa13.4□□□□□ -0.26
BEST3-208ENST00000547208 C8orf58Q8NAV2 365 aa13.4□□□□□ -0.26
BEST3-208ENST00000547208 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
BEST3-208ENST00000547208 COL4A1P02462 1669 aa13.4□□□□□ -0.26
BEST3-208ENST00000547208 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
BEST3-208ENST00000547208 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
BEST3-208ENST00000547208 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
BEST3-208ENST00000547208 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
BEST3-208ENST00000547208 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
BEST3-208ENST00000547208 RPGRQ92834 1020 aaKnown RBP13.39□□□□□ -0.27
BEST3-208ENST00000547208 CRAMP1Q96RY5 1269 aa13.39□□□□□ -0.27
BEST3-208ENST00000547208 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
BEST3-208ENST00000547208 ADAMTSL1Q8N6G6 1762 aa13.38□□□□□ -0.27
BEST3-208ENST00000547208 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
BEST3-208ENST00000547208 RTKN2Q8IZC4 609 aa13.38□□□□□ -0.27
BEST3-208ENST00000547208 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
BEST3-208ENST00000547208 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
BEST3-208ENST00000547208 ZNF277Q9NRM2 450 aaPredicted RBP13.38□□□□□ -0.27
BEST3-208ENST00000547208 MYH3P11055 1940 aa13.38□□□□□ -0.27
BEST3-208ENST00000547208 LTBP1Q14766 1721 aa13.38□□□□□ -0.27
BEST3-208ENST00000547208 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
BEST3-208ENST00000547208 ANP32CO43423 234 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 POTEJP0CG39 1038 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 VEGFAP15692 232 aaPredicted RBP13.37□□□□□ -0.27
BEST3-208ENST00000547208 FSTL1Q12841 308 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 WWC1Q8IX03 1113 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
BEST3-208ENST00000547208 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 PSMD1Q99460 953 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 ABCC4O15439 1325 aa13.37□□□□□ -0.27
BEST3-208ENST00000547208 DDNO94850 711 aaPredicted RBP13.36□□□□□ -0.27
BEST3-208ENST00000547208 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
BEST3-208ENST00000547208 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
BEST3-208ENST00000547208 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
BEST3-208ENST00000547208 TSR2Q969E8 191 aaKnown RBP13.36□□□□□ -0.27
BEST3-208ENST00000547208 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
BEST3-208ENST00000547208 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
BEST3-208ENST00000547208 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
BEST3-208ENST00000547208 TRMT112Q9UI30 125 aaKnown RBP13.36□□□□□ -0.27
BEST3-208ENST00000547208 DUOX1Q9NRD9 1551 aa13.36□□□□□ -0.27
BEST3-208ENST00000547208 SH3TC1Q8TE82 1336 aa13.36□□□□□ -0.27
BEST3-208ENST00000547208 ZNF541Q9H0D2 1346 aa13.36□□□□□ -0.27
BEST3-208ENST00000547208 PPEF1O14829 653 aaPredicted RBP13.35□□□□□ -0.27
BEST3-208ENST00000547208 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
BEST3-208ENST00000547208 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms