RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 KCNA3P22001 575 aa21.42■■□□□ 1.02
CCDC38-203ENST00000546803 CHRNA5P30532 468 aa21.42■■□□□ 1.02
CCDC38-203ENST00000546803 BRPF1P55201 1214 aaPredicted RBP21.42■■□□□ 1.02
CCDC38-203ENST00000546803 SLC10A5Q5PT55 438 aa21.42■■□□□ 1.02
CCDC38-203ENST00000546803 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
CCDC38-203ENST00000546803 PIM2Q9P1W9 311 aa21.42■■□□□ 1.02
CCDC38-203ENST00000546803 RARSP54136 660 aaKnown RBP21.41■■□□□ 1.02
CCDC38-203ENST00000546803 GPR162Q16538 588 aa21.41■■□□□ 1.02
CCDC38-203ENST00000546803 CWC25Q9NXE8 425 aaPredicted RBP21.41■■□□□ 1.02
CCDC38-203ENST00000546803 RIC1Q4ADV7 1423 aa21.4■■□□□ 1.02
CCDC38-203ENST00000546803 BCL2L13Q9BXK5 485 aa21.4■■□□□ 1.02
CCDC38-203ENST00000546803 ABCC12Q96J65 1359 aa21.39■■□□□ 1.02
CCDC38-203ENST00000546803 NUP98P52948 1817 aa21.39■■□□□ 1.02
CCDC38-203ENST00000546803 KIF13BQ9NQT8 1826 aa21.39■■□□□ 1.02
CCDC38-203ENST00000546803 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
CCDC38-203ENST00000546803 ZBTB38Q8NAP3 1195 aaPredicted RBP21.39■■□□□ 1.01
CCDC38-203ENST00000546803 LINS1Q8NG48 757 aa21.39■■□□□ 1.01
CCDC38-203ENST00000546803 F6X3S4 739 aa21.38■■□□□ 1.01
CCDC38-203ENST00000546803 SRGNP10124 158 aa21.38■■□□□ 1.01
CCDC38-203ENST00000546803 PELP1Q8IZL8 1130 aaKnown RBP21.38■■□□□ 1.01
CCDC38-203ENST00000546803 AFDNP55196 1824 aaKnown RBP21.37■■□□□ 1.01
CCDC38-203ENST00000546803 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
CCDC38-203ENST00000546803 GRIN3BO60391 1043 aa21.37■■□□□ 1.01
CCDC38-203ENST00000546803 HSP90B1P14625 803 aaKnown RBP21.37■■□□□ 1.01
CCDC38-203ENST00000546803 DALRD3Q5D0E6 543 aaKnown RBP21.37■■□□□ 1.01
CCDC38-203ENST00000546803 STYK1Q6J9G0 422 aa21.37■■□□□ 1.01
CCDC38-203ENST00000546803 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
CCDC38-203ENST00000546803 NLRP3Q96P20 1036 aa21.37■■□□□ 1.01
CCDC38-203ENST00000546803 PCCAP05165 728 aaPredicted RBP21.36■■□□□ 1.01
CCDC38-203ENST00000546803 NPR1P16066 1061 aa21.36■■□□□ 1.01
CCDC38-203ENST00000546803 CRY2Q49AN0 593 aa21.36■■□□□ 1.01
CCDC38-203ENST00000546803 TTLL6Q8N841 843 aa21.36■■□□□ 1.01
CCDC38-203ENST00000546803 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
CCDC38-203ENST00000546803 ZNF622Q969S3 477 aaKnown RBP eCLIP21.36■■□□□ 1.01
CCDC38-203ENST00000546803 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
CCDC38-203ENST00000546803 BCS1LQ9Y276 419 aa21.36■■□□□ 1.01
CCDC38-203ENST00000546803 KIF16BQ96L93 1317 aa21.35■■□□□ 1.01
CCDC38-203ENST00000546803 YBX3P16989 372 aaKnown RBP eCLIP21.35■■□□□ 1.01
CCDC38-203ENST00000546803 CWF19L2Q2TBE0 894 aaKnown RBP21.35■■□□□ 1.01
CCDC38-203ENST00000546803 BEND3Q5T5X7 828 aa21.35■■□□□ 1.01
CCDC38-203ENST00000546803 HCLS1P14317 486 aaPredicted RBP21.34■■□□□ 1.01
CCDC38-203ENST00000546803 GCKRQ14397 625 aa21.34■■□□□ 1.01
CCDC38-203ENST00000546803 SYNE4Q8N205 404 aa21.34■■□□□ 1.01
CCDC38-203ENST00000546803 WWC3Q9ULE0 1092 aa21.34■■□□□ 1.01
CCDC38-203ENST00000546803 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1.01
CCDC38-203ENST00000546803 IRS4O14654 1257 aaPredicted RBP21.33■■□□□ 1.01
CCDC38-203ENST00000546803 ALDH1L1O75891 902 aa21.33■■□□□ 1.01
CCDC38-203ENST00000546803 SLC4A10Q6U841 1118 aa21.33■■□□□ 1.01
CCDC38-203ENST00000546803 ARHGAP45Q92619 1136 aa21.33■■□□□ 1.01
CCDC38-203ENST00000546803 RPGRQ92834 1020 aaKnown RBP21.33■■□□□ 1.01
CCDC38-203ENST00000546803 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1.01
CCDC38-203ENST00000546803 NOB1Q9ULX3 412 aaKnown RBP21.33■■□□□ 1.01
CCDC38-203ENST00000546803 IPO8O15397 1037 aaKnown RBP21.32■■□□□ 1
CCDC38-203ENST00000546803 ALDH1B1P30837 517 aa21.32■■□□□ 1
CCDC38-203ENST00000546803 HOXA10P31260 410 aaPredicted RBP21.32■■□□□ 1
CCDC38-203ENST00000546803 SRCIN1Q9C0H9 1055 aa21.32■■□□□ 1
CCDC38-203ENST00000546803 CACNA1FO60840 1977 aa21.32■■□□□ 1
CCDC38-203ENST00000546803 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
CCDC38-203ENST00000546803 CDHR2Q9BYE9 1310 aa21.31■■□□□ 1
CCDC38-203ENST00000546803 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
CCDC38-203ENST00000546803 H7C1W4 665 aa21.31■■□□□ 1
CCDC38-203ENST00000546803 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
CCDC38-203ENST00000546803 RBM17Q96I25 401 aaKnown RBP21.31■■□□□ 1
CCDC38-203ENST00000546803 SF3B3Q15393 1217 aaKnown RBP21.3■■□□□ 1
CCDC38-203ENST00000546803 C3orf67Q6ZVT6 689 aa21.3■■□□□ 1
CCDC38-203ENST00000546803 YTHDC1Q96MU7 727 aaKnown RBP21.3■■□□□ 1
CCDC38-203ENST00000546803 CRAMP1Q96RY5 1269 aa21.3■■□□□ 1
CCDC38-203ENST00000546803 PDE8AO60658 829 aa21.29■■□□□ 1
CCDC38-203ENST00000546803 BCAR3O75815 825 aa21.29■■□□□ 1
CCDC38-203ENST00000546803 PRPF40BQ6NWY9 871 aaKnown RBP21.28■■□□□ 1
CCDC38-203ENST00000546803 UBE3BQ7Z3V4 1068 aa21.28■■□□□ 1
CCDC38-203ENST00000546803 JARID2Q92833 1246 aaPredicted RBP21.28■■□□□ 1
CCDC38-203ENST00000546803 ANKRD31Q8N7Z5 1873 aa21.28■■□□□ 1
CCDC38-203ENST00000546803 N4BP2Q86UW6 1770 aaPredicted RBP21.27■■□□□ 1
CCDC38-203ENST00000546803 GRM8O00222 908 aa21.26■□□□□ 0.99
CCDC38-203ENST00000546803 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
CCDC38-203ENST00000546803 CASP7P55210 303 aa21.26■□□□□ 0.99
CCDC38-203ENST00000546803 SOGA3Q5TF21 947 aa21.26■□□□□ 0.99
CCDC38-203ENST00000546803 DDX46Q7L014 1031 aaKnown RBP21.26■□□□□ 0.99
CCDC38-203ENST00000546803 PLA2G12BQ9BX93 195 aa21.26■□□□□ 0.99
CCDC38-203ENST00000546803 C9orf78Q9NZ63 289 aaPredicted RBP21.26■□□□□ 0.99
CCDC38-203ENST00000546803 CCDC152Q4G0S7 254 aa21.25■□□□□ 0.99
CCDC38-203ENST00000546803 ATF7IPQ6VMQ6 1270 aa21.25■□□□□ 0.99
CCDC38-203ENST00000546803 FRAT1Q92837 279 aaPredicted RBP21.25■□□□□ 0.99
CCDC38-203ENST00000546803 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
CCDC38-203ENST00000546803 ARHGAP27Q6ZUM4 889 aa21.24■□□□□ 0.99
CCDC38-203ENST00000546803 TNRC6CQ9HCJ0 1690 aaKnown RBP21.24■□□□□ 0.99
CCDC38-203ENST00000546803 C21orf2O43822 256 aa21.23■□□□□ 0.99
CCDC38-203ENST00000546803 BBOX1O75936 387 aa21.23■□□□□ 0.99
CCDC38-203ENST00000546803 TRIM27P14373 513 aa21.23■□□□□ 0.99
CCDC38-203ENST00000546803 CTSWP56202 376 aa21.23■□□□□ 0.99
CCDC38-203ENST00000546803 C7orf43Q8WVR3 580 aa21.23■□□□□ 0.99
CCDC38-203ENST00000546803 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
CCDC38-203ENST00000546803 GRAPQ13588 217 aa21.22■□□□□ 0.99
CCDC38-203ENST00000546803 CC2D2BQ6DHV5 1058 aa21.22■□□□□ 0.99
CCDC38-203ENST00000546803 GRAPLQ8TC17 118 aaPredicted RBP21.22■□□□□ 0.99
CCDC38-203ENST00000546803 UTYO14607 1347 aa21.22■□□□□ 0.99
CCDC38-203ENST00000546803 ABCC4O15439 1325 aa21.22■□□□□ 0.99
CCDC38-203ENST00000546803 COL11A2P13942 1736 aaPredicted RBP21.21■□□□□ 0.99
CCDC38-203ENST00000546803 INTS3Q68E01 1043 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms