RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 POTEJP0CG39 1038 aa18.73■□□□□ 0.59
TROAP-203ENST00000546735 COPS6Q7L5N1 327 aa18.73■□□□□ 0.59
TROAP-203ENST00000546735 RTKN2Q8IZC4 609 aa18.73■□□□□ 0.59
TROAP-203ENST00000546735 SYNE4Q8N205 404 aa18.73■□□□□ 0.59
TROAP-203ENST00000546735 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
TROAP-203ENST00000546735 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
TROAP-203ENST00000546735 XAGE3Q8WTP9 111 aa18.72■□□□□ 0.59
TROAP-203ENST00000546735 KLRG1Q96E93 195 aa18.72■□□□□ 0.59
TROAP-203ENST00000546735 ZNF541Q9H0D2 1346 aa18.72■□□□□ 0.59
TROAP-203ENST00000546735 IARSP41252 1262 aaKnown RBP18.71■□□□□ 0.59
TROAP-203ENST00000546735 PPP1R42Q7Z4L9 355 aa18.71■□□□□ 0.59
TROAP-203ENST00000546735 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
TROAP-203ENST00000546735 RIC1Q4ADV7 1423 aa18.7■□□□□ 0.58
TROAP-203ENST00000546735 PARP10Q53GL7 1025 aa18.7■□□□□ 0.58
TROAP-203ENST00000546735 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
TROAP-203ENST00000546735 ZNF428Q96B54 188 aa18.7■□□□□ 0.58
TROAP-203ENST00000546735 RBM17Q96I25 401 aaKnown RBP18.7■□□□□ 0.58
TROAP-203ENST00000546735 UTP14AQ9BVJ6 771 aaKnown RBP18.69■□□□□ 0.58
TROAP-203ENST00000546735 DDX21Q9NR30 783 aaKnown RBP eCLIP18.69■□□□□ 0.58
TROAP-203ENST00000546735 CHPF2Q9P2E5 772 aa18.69■□□□□ 0.58
TROAP-203ENST00000546735 PPEF1O14829 653 aaPredicted RBP18.68■□□□□ 0.58
TROAP-203ENST00000546735 HDGFL1Q5TGJ6 251 aa18.67■□□□□ 0.58
TROAP-203ENST00000546735 CHADLQ6NUI6 762 aa18.67■□□□□ 0.58
TROAP-203ENST00000546735 NLRP10Q86W26 655 aa18.67■□□□□ 0.58
TROAP-203ENST00000546735 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
TROAP-203ENST00000546735 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
TROAP-203ENST00000546735 PSMD1Q99460 953 aa18.67■□□□□ 0.58
TROAP-203ENST00000546735 APAF1O14727 1248 aa18.66■□□□□ 0.58
TROAP-203ENST00000546735 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
TROAP-203ENST00000546735 SLC10A5Q5PT55 438 aa18.66■□□□□ 0.58
TROAP-203ENST00000546735 L3MBTL3Q96JM7 780 aaPredicted RBP18.66■□□□□ 0.58
TROAP-203ENST00000546735 TAF1DQ9H5J8 278 aaPredicted RBP18.66■□□□□ 0.58
TROAP-203ENST00000546735 IQCA1LA6NCM1 817 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 FZD9O00144 591 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 TCIRG1Q13488 830 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 IFFO2Q5TF58 517 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 CC2D2BQ6DHV5 1058 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 JMYQ8N9B5 988 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 CFAP44Q96MT7 982 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 MBIPQ9NS73 344 aa18.65■□□□□ 0.58
TROAP-203ENST00000546735 COL4A5P29400 1685 aa18.64■□□□□ 0.57
TROAP-203ENST00000546735 EAPPQ56P03 285 aaPredicted RBP18.64■□□□□ 0.57
TROAP-203ENST00000546735 DUSP27Q5VZP5 1158 aa18.64■□□□□ 0.57
TROAP-203ENST00000546735 TRMT112Q9UI30 125 aaKnown RBP18.64■□□□□ 0.57
TROAP-203ENST00000546735 ABCC4O15439 1325 aa18.64■□□□□ 0.57
TROAP-203ENST00000546735 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.57
TROAP-203ENST00000546735 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
TROAP-203ENST00000546735 HACL1Q9UJ83 578 aa18.63■□□□□ 0.57
TROAP-203ENST00000546735 HOXB7P09629 217 aa18.62■□□□□ 0.57
TROAP-203ENST00000546735 LARGE2Q8N3Y3 721 aa18.62■□□□□ 0.57
TROAP-203ENST00000546735 DBF4Q9UBU7 674 aaPredicted RBP18.62■□□□□ 0.57
TROAP-203ENST00000546735 GJA3Q9Y6H8 435 aa18.62■□□□□ 0.57
TROAP-203ENST00000546735 ATP5J2-PTCD1G3V325 749 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 ELL2O00472 640 aaPredicted RBP18.61■□□□□ 0.57
TROAP-203ENST00000546735 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 EPHX2P34913 555 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 EIF6P56537 245 aaKnown RBP18.61■□□□□ 0.57
TROAP-203ENST00000546735 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 PLBD2Q8NHP8 589 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 CLEC11AQ9Y240 323 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
TROAP-203ENST00000546735 ANKRD36CQ5JPF3 1778 aa18.6■□□□□ 0.57
TROAP-203ENST00000546735 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
TROAP-203ENST00000546735 ANKRD13DQ6ZTN6 518 aa18.6■□□□□ 0.57
TROAP-203ENST00000546735 GPC2Q8N158 579 aa18.6■□□□□ 0.57
TROAP-203ENST00000546735 SCN4AP35499 1836 aa18.59■□□□□ 0.57
TROAP-203ENST00000546735 PPIP5K2O43314 1243 aa18.59■□□□□ 0.57
TROAP-203ENST00000546735 AOC3Q16853 763 aa18.59■□□□□ 0.57
TROAP-203ENST00000546735 GRIPAP1Q4V328 841 aa18.59■□□□□ 0.57
TROAP-203ENST00000546735 ISCA1Q9BUE6 129 aa18.59■□□□□ 0.57
TROAP-203ENST00000546735 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
TROAP-203ENST00000546735 IFT57Q9NWB7 429 aa18.59■□□□□ 0.57
TROAP-203ENST00000546735 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
TROAP-203ENST00000546735 DDX46Q7L014 1031 aaKnown RBP18.58■□□□□ 0.56
TROAP-203ENST00000546735 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
TROAP-203ENST00000546735 HYPKQ9NX55 129 aa18.58■□□□□ 0.56
TROAP-203ENST00000546735 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
TROAP-203ENST00000546735 PASKQ96RG2 1323 aa18.57■□□□□ 0.56
TROAP-203ENST00000546735 BBOX1O75936 387 aa18.57■□□□□ 0.56
TROAP-203ENST00000546735 GNAI1P63096 354 aa18.57■□□□□ 0.56
TROAP-203ENST00000546735 MAP1SQ66K74 1059 aaPredicted RBP18.57■□□□□ 0.56
TROAP-203ENST00000546735 NIM1KQ8IY84 436 aa18.57■□□□□ 0.56
TROAP-203ENST00000546735 PHAXQ9H814 394 aaKnown RBP18.57■□□□□ 0.56
TROAP-203ENST00000546735 CREBZFQ9NS37 354 aa18.57■□□□□ 0.56
TROAP-203ENST00000546735 LAMB2P55268 1798 aa18.57■□□□□ 0.56
TROAP-203ENST00000546735 ITGBL1O95965 494 aaPredicted RBP18.56■□□□□ 0.56
TROAP-203ENST00000546735 GRAPQ13588 217 aa18.56■□□□□ 0.56
TROAP-203ENST00000546735 DPP8Q6V1X1 898 aaPredicted RBP18.56■□□□□ 0.56
TROAP-203ENST00000546735 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
TROAP-203ENST00000546735 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
TROAP-203ENST00000546735 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
TROAP-203ENST00000546735 EPS15P42566 896 aa18.55■□□□□ 0.56
TROAP-203ENST00000546735 SCNN1DP51172 638 aa18.55■□□□□ 0.56
TROAP-203ENST00000546735 RIC3Q7Z5B4 369 aa18.55■□□□□ 0.56
TROAP-203ENST00000546735 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
TROAP-203ENST00000546735 MPNDQ8N594 471 aa18.55■□□□□ 0.56
TROAP-203ENST00000546735 LTBP1Q14766 1721 aa18.54■□□□□ 0.56
TROAP-203ENST00000546735 HSPA1AP0DMV8 641 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms