RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 C16orf46Q6P387 395 aa11.22□□□□□ -0.61
CPNE8-204ENST00000546603 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
CPNE8-204ENST00000546603 IFT43Q96FT9 208 aa11.22□□□□□ -0.61
CPNE8-204ENST00000546603 MKNK1Q9BUB5 465 aa11.22□□□□□ -0.61
CPNE8-204ENST00000546603 MICAL2O94851 1124 aa11.21□□□□□ -0.61
CPNE8-204ENST00000546603 EPXP11678 715 aa11.21□□□□□ -0.61
CPNE8-204ENST00000546603 PCBP4P57723 403 aaKnown RBP11.21□□□□□ -0.61
CPNE8-204ENST00000546603 KLF15Q9UIH9 416 aa11.21□□□□□ -0.61
CPNE8-204ENST00000546603 IDH3AP50213 366 aa11.2□□□□□ -0.62
CPNE8-204ENST00000546603 GRIN2CQ14957 1233 aa11.2□□□□□ -0.62
CPNE8-204ENST00000546603 SYT9Q86SS6 491 aa11.2□□□□□ -0.62
CPNE8-204ENST00000546603 SCARF2Q96GP6 870 aaPredicted RBP11.2□□□□□ -0.62
CPNE8-204ENST00000546603 SLC30A3Q99726 388 aa11.2□□□□□ -0.62
CPNE8-204ENST00000546603 EFCC1Q9HA90 598 aa11.2□□□□□ -0.62
CPNE8-204ENST00000546603 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
CPNE8-204ENST00000546603 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
CPNE8-204ENST00000546603 SIN3BO75182 1162 aa11.19□□□□□ -0.62
CPNE8-204ENST00000546603 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
CPNE8-204ENST00000546603 INPP5BP32019 993 aa11.19□□□□□ -0.62
CPNE8-204ENST00000546603 ARSDP51689 593 aa11.19□□□□□ -0.62
CPNE8-204ENST00000546603 NAA30Q147X3 362 aaPredicted RBP11.18□□□□□ -0.62
CPNE8-204ENST00000546603 CAPN12Q6ZSI9 719 aa11.18□□□□□ -0.62
CPNE8-204ENST00000546603 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
CPNE8-204ENST00000546603 SAP130Q9H0E3 1048 aa11.18□□□□□ -0.62
CPNE8-204ENST00000546603 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
CPNE8-204ENST00000546603 AMPD1P23109 780 aa11.17□□□□□ -0.62
CPNE8-204ENST00000546603 PODNQ7Z5L7 613 aa11.17□□□□□ -0.62
CPNE8-204ENST00000546603 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
CPNE8-204ENST00000546603 SSFA2P28290 1259 aa11.16□□□□□ -0.62
CPNE8-204ENST00000546603 TREML1Q86YW5 311 aa11.16□□□□□ -0.62
CPNE8-204ENST00000546603 BEND7Q8N7W2 519 aaPredicted RBP11.16□□□□□ -0.62
CPNE8-204ENST00000546603 BTBD6Q96KE9 485 aa11.16□□□□□ -0.62
CPNE8-204ENST00000546603 ALAS2P22557 587 aa11.15□□□□□ -0.62
CPNE8-204ENST00000546603 CCINQ13939 588 aa11.15□□□□□ -0.62
CPNE8-204ENST00000546603 BHMTQ93088 406 aa11.15□□□□□ -0.62
CPNE8-204ENST00000546603 GSX2Q9BZM3 304 aa11.15□□□□□ -0.62
CPNE8-204ENST00000546603 ELOA3CA0A087WX78 387 aaPredicted RBP11.14□□□□□ -0.63
CPNE8-204ENST00000546603 ELOA3DA6NLF2 546 aaPredicted RBP11.14□□□□□ -0.63
CPNE8-204ENST00000546603 OPLAHO14841 1288 aa11.14□□□□□ -0.63
CPNE8-204ENST00000546603 KCNMA1Q12791 1236 aa11.14□□□□□ -0.63
CPNE8-204ENST00000546603 ELOA3BQ3SY89 546 aa11.14□□□□□ -0.63
CPNE8-204ENST00000546603 RAB44Q7Z6P3 723 aaPredicted RBP11.14□□□□□ -0.63
CPNE8-204ENST00000546603 ELOA3Q8NG57 546 aa11.14□□□□□ -0.63
CPNE8-204ENST00000546603 TNFRSF25Q93038 417 aa11.14□□□□□ -0.63
CPNE8-204ENST00000546603 PNMA5Q96PV4 448 aa11.14□□□□□ -0.63
CPNE8-204ENST00000546603 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
CPNE8-204ENST00000546603 ADARB2-AS1A8MUL3 147 aa11.13□□□□□ -0.63
CPNE8-204ENST00000546603 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
CPNE8-204ENST00000546603 STIM2Q9P246 746 aa11.13□□□□□ -0.63
CPNE8-204ENST00000546603 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
CPNE8-204ENST00000546603 CHSY3Q70JA7 882 aa11.12□□□□□ -0.63
CPNE8-204ENST00000546603 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
CPNE8-204ENST00000546603 SEPT3Q9UH03 358 aa11.12□□□□□ -0.63
CPNE8-204ENST00000546603 RTCBQ9Y3I0 505 aaKnown RBP11.12□□□□□ -0.63
CPNE8-204ENST00000546603 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
CPNE8-204ENST00000546603 GRNP28799 593 aaKnown RBP11.11□□□□□ -0.63
CPNE8-204ENST00000546603 PDE4CQ08493 712 aa11.11□□□□□ -0.63
CPNE8-204ENST00000546603 MDFIQ99750 246 aa11.11□□□□□ -0.63
CPNE8-204ENST00000546603 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
CPNE8-204ENST00000546603 MKL2Q9ULH7 1088 aa11.11□□□□□ -0.63
CPNE8-204ENST00000546603 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
CPNE8-204ENST00000546603 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
CPNE8-204ENST00000546603 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
CPNE8-204ENST00000546603 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
CPNE8-204ENST00000546603 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
CPNE8-204ENST00000546603 RGL4Q8IZJ4 473 aa11.1□□□□□ -0.63
CPNE8-204ENST00000546603 ABTB2Q8N961 1025 aa11.1□□□□□ -0.63
CPNE8-204ENST00000546603 PIK3R2O00459 728 aa11.09□□□□□ -0.63
CPNE8-204ENST00000546603 IRS1P35568 1242 aa11.09□□□□□ -0.63
CPNE8-204ENST00000546603 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
CPNE8-204ENST00000546603 NFKB1P19838 968 aa11.08□□□□□ -0.64
CPNE8-204ENST00000546603 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
CPNE8-204ENST00000546603 EGFRP00533 1210 aa11.07□□□□□ -0.64
CPNE8-204ENST00000546603 HOXB4P17483 251 aaPredicted RBP11.07□□□□□ -0.64
CPNE8-204ENST00000546603 ADH7P40394 386 aa11.07□□□□□ -0.64
CPNE8-204ENST00000546603 RASSF7Q02833 373 aa11.07□□□□□ -0.64
CPNE8-204ENST00000546603 FAM26DQ5JW98 314 aa11.07□□□□□ -0.64
CPNE8-204ENST00000546603 PHLDB3Q6NSJ2 640 aa11.07□□□□□ -0.64
CPNE8-204ENST00000546603 HELQQ8TDG4 1101 aa11.07□□□□□ -0.64
CPNE8-204ENST00000546603 PIK3R5Q8WYR1 880 aa11.07□□□□□ -0.64
CPNE8-204ENST00000546603 XYLBO75191 536 aa11.06□□□□□ -0.64
CPNE8-204ENST00000546603 MAP3K6O95382 1288 aa11.06□□□□□ -0.64
CPNE8-204ENST00000546603 SCNN1AP37088 669 aa11.06□□□□□ -0.64
CPNE8-204ENST00000546603 ZAP70P43403 619 aa11.06□□□□□ -0.64
CPNE8-204ENST00000546603 DGKGP49619 791 aa11.06□□□□□ -0.64
CPNE8-204ENST00000546603 GTF3C2Q8WUA4 911 aaPredicted RBP11.06□□□□□ -0.64
CPNE8-204ENST00000546603 UBE2OQ9C0C9 1292 aaKnown RBP11.06□□□□□ -0.64
CPNE8-204ENST00000546603 IGFLR1Q9H665 355 aa11.06□□□□□ -0.64
CPNE8-204ENST00000546603 USP20Q9Y2K6 914 aa11.06□□□□□ -0.64
CPNE8-204ENST00000546603 SASH3O75995 380 aa11.05□□□□□ -0.64
CPNE8-204ENST00000546603 GSK3AP49840 483 aa11.05□□□□□ -0.64
CPNE8-204ENST00000546603 PCSK7Q16549 785 aa11.05□□□□□ -0.64
CPNE8-204ENST00000546603 LINC00114Q6XXX2 140 aa11.05□□□□□ -0.64
CPNE8-204ENST00000546603 TMEM151AQ8N4L1 468 aa11.05□□□□□ -0.64
CPNE8-204ENST00000546603 RETREG2Q8NC44 543 aa11.05□□□□□ -0.64
CPNE8-204ENST00000546603 GDF11O95390 407 aa11.04□□□□□ -0.64
CPNE8-204ENST00000546603 TARSP26639 723 aaKnown RBP11.04□□□□□ -0.64
CPNE8-204ENST00000546603 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
CPNE8-204ENST00000546603 KRT25Q7Z3Z0 450 aa11.04□□□□□ -0.64
CPNE8-204ENST00000546603 KCNMB2Q9Y691 235 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms