RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PRR20DP86480 221 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 PRR20BP86481 221 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 PRR20AP86496 221 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 RALBP1Q15311 655 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 UNC5CLQ8IV45 518 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 IP6K1Q92551 441 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
PRKDC-211ENST00000546304 STRN4Q9NRL3 753 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 POLKQ9UBT6 870 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 USP21Q9UK80 565 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 SHANK3Q9BYB0 1731 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 WDR17Q8IZU2 1322 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 PPP2R1AP30153 589 aa8.53□□□□□ -1.04
PRKDC-211ENST00000546304 ZNF772Q68DY9 489 aaPredicted RBP8.53□□□□□ -1.04
PRKDC-211ENST00000546304 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
PRKDC-211ENST00000546304 PRKRIP1Q9H875 184 aaPredicted RBP8.53□□□□□ -1.04
PRKDC-211ENST00000546304 PKD1L3Q7Z443 1732 aa8.53□□□□□ -1.04
PRKDC-211ENST00000546304 MYBBP1AQ9BQG0 1328 aaKnown RBP8.53□□□□□ -1.04
PRKDC-211ENST00000546304 BRWD3Q6RI45 1802 aa8.52□□□□□ -1.04
PRKDC-211ENST00000546304 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
PRKDC-211ENST00000546304 CSB-PGBD3P0DP91 1061 aa8.52□□□□□ -1.05
PRKDC-211ENST00000546304 VPS72Q15906 364 aa8.52□□□□□ -1.05
PRKDC-211ENST00000546304 HSP90AB2PQ58FF8 381 aa8.52□□□□□ -1.05
PRKDC-211ENST00000546304 ANKRD24Q8TF21 1146 aa8.52□□□□□ -1.05
PRKDC-211ENST00000546304 DDRGK1Q96HY6 314 aa8.52□□□□□ -1.05
PRKDC-211ENST00000546304 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
PRKDC-211ENST00000546304 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
PRKDC-211ENST00000546304 TRPC5Q9UL62 973 aaPredicted RBP8.52□□□□□ -1.05
PRKDC-211ENST00000546304 ANP32CO43423 234 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 GDF9O60383 454 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 MTHFSP49914 203 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 PTPRNQ16849 979 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 LARP1Q6PKG0 1096 aaKnown RBP8.51□□□□□ -1.05
PRKDC-211ENST00000546304 LTV1Q96GA3 475 aaPredicted RBP8.51□□□□□ -1.05
PRKDC-211ENST00000546304 RGS17Q9UGC6 210 aaPredicted RBP8.51□□□□□ -1.05
PRKDC-211ENST00000546304 DISP2A7MBM2 1401 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 RGS12O14924 1447 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 SPATA31A1Q5TZJ5 1347 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
PRKDC-211ENST00000546304 MEGF6O75095 1541 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 EVA1CP58658 441 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 TRIM32Q13049 653 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 EIF4A2Q14240 407 aaKnown RBP8.5□□□□□ -1.05
PRKDC-211ENST00000546304 TNS2Q63HR2 1409 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 TOM1L2Q6ZVM7 507 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 CFAP53Q96M91 514 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 FAM117AQ9C073 453 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 CCDC9Q9Y3X0 531 aaKnown RBP8.5□□□□□ -1.05
PRKDC-211ENST00000546304 IGSF1Q8N6C5 1336 aa8.5□□□□□ -1.05
PRKDC-211ENST00000546304 OVOS2A0A0G2JMS6 1433 aa8.49□□□□□ -1.05
PRKDC-211ENST00000546304 LILRB3O75022 631 aa8.49□□□□□ -1.05
PRKDC-211ENST00000546304 CCNYL3P0C7X3 344 aa8.49□□□□□ -1.05
PRKDC-211ENST00000546304 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
PRKDC-211ENST00000546304 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
PRKDC-211ENST00000546304 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
PRKDC-211ENST00000546304 PKD2L1Q9P0L9 805 aa8.49□□□□□ -1.05
PRKDC-211ENST00000546304 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
PRKDC-211ENST00000546304 VIRMAQ69YN4 1812 aaKnown RBP8.49□□□□□ -1.05
PRKDC-211ENST00000546304 KDRP35968 1356 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 CFAP99D6REC4 459 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 RBM6P78332 1123 aaKnown RBP8.48□□□□□ -1.05
PRKDC-211ENST00000546304 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 DIEXFQ68CQ4 756 aaKnown RBP8.48□□□□□ -1.05
PRKDC-211ENST00000546304 POTEAQ6S8J7 498 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 Q6ZNB5 142 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 TCP11L2Q8N4U5 519 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 GJD4Q96KN9 370 aaPredicted RBP8.48□□□□□ -1.05
PRKDC-211ENST00000546304 QTRT2Q9H974 415 aaKnown RBP8.48□□□□□ -1.05
PRKDC-211ENST00000546304 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
PRKDC-211ENST00000546304 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
PRKDC-211ENST00000546304 DIAPH1O60610 1272 aaKnown RBP8.47□□□□□ -1.05
PRKDC-211ENST00000546304 IL13P35225 146 aa8.47□□□□□ -1.05
PRKDC-211ENST00000546304 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
PRKDC-211ENST00000546304 QPCTQ16769 361 aa8.47□□□□□ -1.05
PRKDC-211ENST00000546304 SH3D19Q5HYK7 790 aa8.47□□□□□ -1.05
PRKDC-211ENST00000546304 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
PRKDC-211ENST00000546304 USHBP1Q8N6Y0 703 aa8.47□□□□□ -1.05
PRKDC-211ENST00000546304 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
PRKDC-211ENST00000546304 THRAP3Q9Y2W1 955 aaKnown RBP8.47□□□□□ -1.05
PRKDC-211ENST00000546304 RXRBP28702 533 aa8.46□□□□□ -1.06
PRKDC-211ENST00000546304 MYT1Q01538 1121 aa8.46□□□□□ -1.06
PRKDC-211ENST00000546304 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
PRKDC-211ENST00000546304 NBPF6Q5VWK0 638 aa8.46□□□□□ -1.06
PRKDC-211ENST00000546304 PTCRAQ6ISU1 281 aaPredicted RBP8.46□□□□□ -1.06
PRKDC-211ENST00000546304 NBPF4Q96M43 638 aa8.46□□□□□ -1.06
PRKDC-211ENST00000546304 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
PRKDC-211ENST00000546304 TOGARAM1Q9Y4F4 1720 aa8.46□□□□□ -1.06
PRKDC-211ENST00000546304 SBF2Q86WG5 1849 aa8.45□□□□□ -1.06
PRKDC-211ENST00000546304 DLG5Q8TDM6 1919 aa8.45□□□□□ -1.06
PRKDC-211ENST00000546304 TNFRSF10AO00220 468 aa8.45□□□□□ -1.06
PRKDC-211ENST00000546304 WNT7AO00755 349 aa8.45□□□□□ -1.06
PRKDC-211ENST00000546304 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
PRKDC-211ENST00000546304 IL2RBP14784 551 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms