RNA–Protein interactions for RNA: ENST00000546048.5

MDM2-234, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-234ENST00000546048 SPG7Q9UQ90 795 aa6.85□□□□□ -1.31
MDM2-234ENST00000546048 PCDHB3Q9Y5E6 796 aa6.85□□□□□ -1.31
MDM2-234ENST00000546048 NHSQ6T4R5 1651 aa6.84□□□□□ -1.31
MDM2-234ENST00000546048 PNPLA7Q6ZV29 1317 aa6.84□□□□□ -1.31
MDM2-234ENST00000546048 TLL1O43897 1013 aa6.84□□□□□ -1.31
MDM2-234ENST00000546048 PLEKHO1Q53GL0 409 aaPredicted RBP6.84□□□□□ -1.31
MDM2-234ENST00000546048 LINC00116Q8NCU8 138 aa6.84□□□□□ -1.31
MDM2-234ENST00000546048 CCNL1Q9UK58 526 aaPredicted RBP6.84□□□□□ -1.31
MDM2-234ENST00000546048 TOGARAM1Q9Y4F4 1720 aa6.84□□□□□ -1.31
MDM2-234ENST00000546048 PALLDQ8WX93 1383 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 U2SURPO15042 1029 aaKnown RBP6.83□□□□□ -1.32
MDM2-234ENST00000546048 ACTN4O43707 911 aaKnown RBP6.83□□□□□ -1.32
MDM2-234ENST00000546048 KMT5BQ4FZB7 885 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 PPP1R18Q6NYC8 613 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 COL23A1Q86Y22 540 aaPredicted RBP6.83□□□□□ -1.32
MDM2-234ENST00000546048 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 IL17REQ8NFR9 667 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 RSPH6AQ9H0K4 717 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 PAPPAQ13219 1627 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 BTAF1O14981 1849 aa6.83□□□□□ -1.32
MDM2-234ENST00000546048 PKD1L3Q7Z443 1732 aa6.82□□□□□ -1.32
MDM2-234ENST00000546048 TULP1O00294 542 aaPredicted RBP6.82□□□□□ -1.32
MDM2-234ENST00000546048 RNMTO43148 476 aaKnown RBP6.82□□□□□ -1.32
MDM2-234ENST00000546048 ZPR1O75312 459 aa6.82□□□□□ -1.32
MDM2-234ENST00000546048 SLC39A6Q13433 755 aa6.82□□□□□ -1.32
MDM2-234ENST00000546048 SLC27A3Q5K4L6 730 aa6.82□□□□□ -1.32
MDM2-234ENST00000546048 STK32BQ9NY57 414 aa6.82□□□□□ -1.32
MDM2-234ENST00000546048 DOT1LQ8TEK3 1739 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 UTRNP46939 3433 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 LOC102724428A0A0B4J2F2 783 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 ERVV-2B6SEH9 535 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 KCNQ3O43525 872 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 PRKAR2BP31323 418 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 SIK1P57059 783 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 MAP2K5Q13163 448 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 AMOTQ4VCS5 1084 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 CCDC184Q52MB2 194 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 AKAP4Q5JQC9 854 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 DCAF5Q96JK2 942 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 TMOD3Q9NYL9 352 aa6.81□□□□□ -1.32
MDM2-234ENST00000546048 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
MDM2-234ENST00000546048 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
MDM2-234ENST00000546048 CABP4P57796 275 aa6.8□□□□□ -1.32
MDM2-234ENST00000546048 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.326e-7■□□□□ 8.9
MDM2-234ENST00000546048 DCTN1Q14203 1278 aa6.8□□□□□ -1.32
MDM2-234ENST00000546048 MSL1Q68DK7 614 aa6.8□□□□□ -1.32
MDM2-234ENST00000546048 RDH13Q8NBN7 331 aa6.8□□□□□ -1.32
MDM2-234ENST00000546048 PLEKHF1Q96S99 279 aa6.8□□□□□ -1.32
MDM2-234ENST00000546048 IRX2Q9BZI1 471 aaPredicted RBP6.8□□□□□ -1.32
MDM2-234ENST00000546048 TFCP2L1Q9NZI6 479 aa6.8□□□□□ -1.32
MDM2-234ENST00000546048 DAXXQ9UER7 740 aaPredicted RBP6.8□□□□□ -1.32
MDM2-234ENST00000546048 CASZ1Q86V15 1759 aa6.8□□□□□ -1.32
MDM2-234ENST00000546048 DDX11L8A8MPP1 907 aa6.79□□□□□ -1.32
MDM2-234ENST00000546048 ATP6V1AP38606 617 aa6.79□□□□□ -1.32
MDM2-234ENST00000546048 C1orf141Q5JVX7 400 aa6.79□□□□□ -1.32
MDM2-234ENST00000546048 SLC52A2Q9HAB3 445 aa6.79□□□□□ -1.32
MDM2-234ENST00000546048 SPON1Q9HCB6 807 aa6.79□□□□□ -1.32
MDM2-234ENST00000546048 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.79□□□□□ -1.32
MDM2-234ENST00000546048 KAT6BQ8WYB5 2073 aa6.79□□□□□ -1.32
MDM2-234ENST00000546048 RGPD3A6NKT7 1758 aaPredicted RBP6.79□□□□□ -1.32
MDM2-234ENST00000546048 RGPD4Q7Z3J3 1758 aa6.79□□□□□ -1.32
MDM2-234ENST00000546048 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
MDM2-234ENST00000546048 HSP90AB1P08238 724 aaKnown RBP6.78□□□□□ -1.32
MDM2-234ENST00000546048 PUS10Q3MIT2 529 aaKnown RBP6.78□□□□□ -1.32
MDM2-234ENST00000546048 INTS5Q6P9B9 1019 aaKnown RBP6.78□□□□□ -1.32
MDM2-234ENST00000546048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.78□□□□□ -1.32
MDM2-234ENST00000546048 MCM10Q7L590 875 aa6.78□□□□□ -1.32
MDM2-234ENST00000546048 SMARCC1Q92922 1105 aaPredicted RBP6.78□□□□□ -1.32
MDM2-234ENST00000546048 THUMPD2Q9BTF0 503 aaKnown RBP6.78□□□□□ -1.32
MDM2-234ENST00000546048 MTFR1LQ9H019 292 aa6.78□□□□□ -1.32
MDM2-234ENST00000546048 PRKRIP1Q9H875 184 aaPredicted RBP6.78□□□□□ -1.32
MDM2-234ENST00000546048 PLEKHG2Q9H7P9 1386 aa6.78□□□□□ -1.32
MDM2-234ENST00000546048 LRP5O75197 1615 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 LY75O60449 1722 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 DNAJC10Q8IXB1 793 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 CCDC102AQ96A19 550 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 CFAP53Q96M91 514 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 PRKD2Q9BZL6 878 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 FHDC1Q9C0D6 1143 aaPredicted RBP6.77□□□□□ -1.33
MDM2-234ENST00000546048 MIS18AQ9NYP9 233 aa6.77□□□□□ -1.33
MDM2-234ENST00000546048 ITGB4P16144 1822 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 IRF6O14896 467 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 S1PR4O95977 384 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 RALBP1Q15311 655 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 CCDC146Q8IYE0 955 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 NLGN2Q8NFZ4 835 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 ZNF496Q96IT1 587 aaPredicted RBP6.76□□□□□ -1.33
MDM2-234ENST00000546048 SYT17Q9BSW7 474 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 SRP68Q9UHB9 627 aaKnown RBP6.76□□□□□ -1.33
MDM2-234ENST00000546048 CEMIPQ8WUJ3 1361 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 MAP3K5Q99683 1374 aa6.76□□□□□ -1.33
MDM2-234ENST00000546048 GOLGB1Q14789 3259 aaKnown RBP6.75□□□□□ -1.33
MDM2-234ENST00000546048 MRC1P22897 1456 aa6.75□□□□□ -1.33
MDM2-234ENST00000546048 RNF223E7ERA6 249 aa6.75□□□□□ -1.33
MDM2-234ENST00000546048 NR1I2O75469 434 aa6.75□□□□□ -1.33
MDM2-234ENST00000546048 CYP19A1P11511 503 aaPredicted RBP6.75□□□□□ -1.33
MDM2-234ENST00000546048 ZEB1P37275 1124 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms