RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NUTM1Q86Y26 1132 aa26.08■■□□□ 1.77
HMGA2-211ENST00000545998 BRIP1Q9BX63 1249 aa26.08■■□□□ 1.77
HMGA2-211ENST00000545998 PXDNLA1KZ92 1463 aa26.08■■□□□ 1.77
HMGA2-211ENST00000545998 TGFB2P61812 414 aa26.07■■□□□ 1.76
HMGA2-211ENST00000545998 ERFEQ4G0M1 354 aa26.07■■□□□ 1.76
HMGA2-211ENST00000545998 CCDC191Q8NCU4 936 aa26.07■■□□□ 1.76
HMGA2-211ENST00000545998 RNF123Q5XPI4 1314 aa26.07■■□□□ 1.76
HMGA2-211ENST00000545998 BCAR3O75815 825 aa26.07■■□□□ 1.76
HMGA2-211ENST00000545998 GTF2E1P29083 439 aaPredicted RBP26.07■■□□□ 1.76
HMGA2-211ENST00000545998 NOB1Q9ULX3 412 aaKnown RBP26.07■■□□□ 1.76
HMGA2-211ENST00000545998 ABCC12Q96J65 1359 aa26.06■■□□□ 1.76
HMGA2-211ENST00000545998 TRMT112Q9UI30 125 aaKnown RBP26.06■■□□□ 1.76
HMGA2-211ENST00000545998 CWC25Q9NXE8 425 aaPredicted RBP26.05■■□□□ 1.76
HMGA2-211ENST00000545998 NEURL1BA8MQ27 555 aa26.04■■□□□ 1.76
HMGA2-211ENST00000545998 CWF19L2Q2TBE0 894 aaKnown RBP26.04■■□□□ 1.76
HMGA2-211ENST00000545998 LINS1Q8NG48 757 aa26.04■■□□□ 1.76
HMGA2-211ENST00000545998 KIF16BQ96L93 1317 aa26.04■■□□□ 1.76
HMGA2-211ENST00000545998 TNRC6CQ9HCJ0 1690 aaKnown RBP26.04■■□□□ 1.76
HMGA2-211ENST00000545998 DLEC1Q9Y238 1755 aa26.04■■□□□ 1.76
HMGA2-211ENST00000545998 RIC1Q4ADV7 1423 aa26.04■■□□□ 1.76
HMGA2-211ENST00000545998 BRCA1P38398 1863 aaKnown RBP26.04■■□□□ 1.76
HMGA2-211ENST00000545998 PDE6BP35913 854 aa26.03■■□□□ 1.76
HMGA2-211ENST00000545998 BEND3Q5T5X7 828 aa26.03■■□□□ 1.76
HMGA2-211ENST00000545998 COL11A2P13942 1736 aaPredicted RBP26.03■■□□□ 1.76
HMGA2-211ENST00000545998 A0A0G2JLW4 131 aa26.03■■□□□ 1.76
HMGA2-211ENST00000545998 DPEP1P16444 411 aa26.03■■□□□ 1.76
HMGA2-211ENST00000545998 SYNE4Q8N205 404 aa26.03■■□□□ 1.76
HMGA2-211ENST00000545998 SH3TC1Q8TE82 1336 aa26.03■■□□□ 1.76
HMGA2-211ENST00000545998 KCNA3P22001 575 aa26.02■■□□□ 1.76
HMGA2-211ENST00000545998 CHRNA5P30532 468 aa26.02■■□□□ 1.76
HMGA2-211ENST00000545998 SLC10A5Q5PT55 438 aa26.02■■□□□ 1.76
HMGA2-211ENST00000545998 DDX60Q8IY21 1712 aaKnown RBP26.02■■□□□ 1.76
HMGA2-211ENST00000545998 KLRG2A4D1S0 409 aaPredicted RBP26.01■■□□□ 1.75
HMGA2-211ENST00000545998 SLC4A10Q6U841 1118 aa26.01■■□□□ 1.75
HMGA2-211ENST00000545998 ZBTB38Q8NAP3 1195 aaPredicted RBP26.01■■□□□ 1.75
HMGA2-211ENST00000545998 ARHGAP45Q92619 1136 aa26.01■■□□□ 1.75
HMGA2-211ENST00000545998 FAM89AQ96GI7 184 aa26.01■■□□□ 1.75
HMGA2-211ENST00000545998 PDZRN3Q9UPQ7 1066 aa26.01■■□□□ 1.75
HMGA2-211ENST00000545998 C2CD5Q86YS7 1000 aa26■■□□□ 1.75
HMGA2-211ENST00000545998 LAMB2P55268 1798 aa26■■□□□ 1.75
HMGA2-211ENST00000545998 PCCAP05165 728 aaPredicted RBP25.99■■□□□ 1.75
HMGA2-211ENST00000545998 GCKRQ14397 625 aa25.99■■□□□ 1.75
HMGA2-211ENST00000545998 H0YIN7 160 aa25.99■■□□□ 1.75
HMGA2-211ENST00000545998 API5Q9BZZ5 524 aaKnown RBP25.99■■□□□ 1.75
HMGA2-211ENST00000545998 HCLS1P14317 486 aaPredicted RBP25.98■■□□□ 1.75
HMGA2-211ENST00000545998 RTL5Q5HYW3 569 aaPredicted RBP25.98■■□□□ 1.75
HMGA2-211ENST00000545998 IPO8O15397 1037 aaKnown RBP25.97■■□□□ 1.75
HMGA2-211ENST00000545998 SRCIN1Q9C0H9 1055 aa25.97■■□□□ 1.75
HMGA2-211ENST00000545998 RCAN3Q9UKA8 241 aa25.97■■□□□ 1.75
HMGA2-211ENST00000545998 ALDH1L1O75891 902 aa25.96■■□□□ 1.75
HMGA2-211ENST00000545998 SRGNP10124 158 aa25.96■■□□□ 1.75
HMGA2-211ENST00000545998 CRY2Q49AN0 593 aa25.96■■□□□ 1.75
HMGA2-211ENST00000545998 C3orf67Q6ZVT6 689 aa25.96■■□□□ 1.75
HMGA2-211ENST00000545998 FRAT1Q92837 279 aaPredicted RBP25.96■■□□□ 1.75
HMGA2-211ENST00000545998 JARID2Q92833 1246 aaPredicted RBP25.95■■□□□ 1.75
HMGA2-211ENST00000545998 NLRP3Q96P20 1036 aa25.95■■□□□ 1.75
HMGA2-211ENST00000545998 H7C1W4 665 aa25.95■■□□□ 1.74
HMGA2-211ENST00000545998 IRS4O14654 1257 aaPredicted RBP25.95■■□□□ 1.74
HMGA2-211ENST00000545998 ATF7IPQ6VMQ6 1270 aa25.95■■□□□ 1.74
HMGA2-211ENST00000545998 PIM2Q9P1W9 311 aa25.95■■□□□ 1.74
HMGA2-211ENST00000545998 CDHR2Q9BYE9 1310 aa25.94■■□□□ 1.74
HMGA2-211ENST00000545998 TRIM27P14373 513 aa25.94■■□□□ 1.74
HMGA2-211ENST00000545998 MASTLQ96GX5 879 aa25.94■■□□□ 1.74
HMGA2-211ENST00000545998 CASP7P55210 303 aa25.93■■□□□ 1.74
HMGA2-211ENST00000545998 ZKSCAN2Q63HK3 967 aa25.93■■□□□ 1.74
HMGA2-211ENST00000545998 STYK1Q6J9G0 422 aa25.93■■□□□ 1.74
HMGA2-211ENST00000545998 WWC3Q9ULE0 1092 aa25.93■■□□□ 1.74
HMGA2-211ENST00000545998 ABCC4O15439 1325 aa25.92■■□□□ 1.74
HMGA2-211ENST00000545998 MYH3P11055 1940 aa25.92■■□□□ 1.74
HMGA2-211ENST00000545998 CACNA1SQ13698 1873 aa25.92■■□□□ 1.74
HMGA2-211ENST00000545998 NPR1P16066 1061 aa25.92■■□□□ 1.74
HMGA2-211ENST00000545998 UBE3BQ7Z3V4 1068 aa25.92■■□□□ 1.74
HMGA2-211ENST00000545998 ZNF622Q969S3 477 aaKnown RBP eCLIP25.92■■□□□ 1.74
HMGA2-211ENST00000545998 HSP90B1P14625 803 aaKnown RBP25.91■■□□□ 1.74
HMGA2-211ENST00000545998 CCT4P50991 539 aaKnown RBP25.91■■□□□ 1.74
HMGA2-211ENST00000545998 TNNQ9UQP3 1299 aa25.91■■□□□ 1.74
HMGA2-211ENST00000545998 ARFGEF1Q9Y6D6 1849 aa25.91■■□□□ 1.74
HMGA2-211ENST00000545998 GRM8O00222 908 aa25.9■■□□□ 1.74
HMGA2-211ENST00000545998 YBX3P16989 372 aaKnown RBP eCLIP25.9■■□□□ 1.74
HMGA2-211ENST00000545998 PDE8AO60658 829 aa25.89■■□□□ 1.73
HMGA2-211ENST00000545998 HOXA10P31260 410 aaPredicted RBP25.89■■□□□ 1.73
HMGA2-211ENST00000545998 SF3B3Q15393 1217 aaKnown RBP25.89■■□□□ 1.73
HMGA2-211ENST00000545998 DALRD3Q5D0E6 543 aaKnown RBP25.89■■□□□ 1.73
HMGA2-211ENST00000545998 TTLL6Q8N841 843 aa25.89■■□□□ 1.73
HMGA2-211ENST00000545998 SLX4Q8IY92 1834 aa25.89■■□□□ 1.73
HMGA2-211ENST00000545998 INTS3Q68E01 1043 aaKnown RBP25.88■■□□□ 1.73
HMGA2-211ENST00000545998 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
HMGA2-211ENST00000545998 RPGRQ92834 1020 aaKnown RBP25.88■■□□□ 1.73
HMGA2-211ENST00000545998 CNKSR1Q969H4 720 aa25.88■■□□□ 1.73
HMGA2-211ENST00000545998 C9orf78Q9NZ63 289 aaPredicted RBP25.88■■□□□ 1.73
HMGA2-211ENST00000545998 BCS1LQ9Y276 419 aa25.88■■□□□ 1.73
HMGA2-211ENST00000545998 UTYO14607 1347 aa25.88■■□□□ 1.73
HMGA2-211ENST00000545998 GPR162Q16538 588 aa25.87■■□□□ 1.73
HMGA2-211ENST00000545998 CLUAP1Q96AJ1 413 aa25.87■■□□□ 1.73
HMGA2-211ENST00000545998 RBM17Q96I25 401 aaKnown RBP25.86■■□□□ 1.73
HMGA2-211ENST00000545998 PLA2G12BQ9BX93 195 aa25.86■■□□□ 1.73
HMGA2-211ENST00000545998 TAF1P21675 1872 aa25.86■■□□□ 1.73
HMGA2-211ENST00000545998 USP44Q9H0E7 712 aa25.86■■□□□ 1.73
HMGA2-211ENST00000545998 NBPF7P0C2Y1 421 aaPredicted RBP25.85■■□□□ 1.73
HMGA2-211ENST00000545998 ALDH1B1P30837 517 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 507.1 ms