RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 PLEKHF1Q96S99 279 aa22.15■■□□□ 1.14
CPSF7-225ENST00000545934 UBN2Q6ZU65 1347 aa22.14■■□□□ 1.14
CPSF7-225ENST00000545934 EIF4A1P60842 406 aaKnown RBP22.14■■□□□ 1.13
CPSF7-225ENST00000545934 TTLL7Q6ZT98 887 aa22.14■■□□□ 1.13
CPSF7-225ENST00000545934 PRDM10Q9NQV6 1147 aa22.14■■□□□ 1.13
CPSF7-225ENST00000545934 RASSF10A6NK89 507 aa22.12■■□□□ 1.13
CPSF7-225ENST00000545934 ZNF34Q8IZ26 560 aa22.12■■□□□ 1.13
CPSF7-225ENST00000545934 CNTROBQ8N137 903 aa22.12■■□□□ 1.13
CPSF7-225ENST00000545934 CLEC11AQ9Y240 323 aa22.12■■□□□ 1.13
CPSF7-225ENST00000545934 GRIPAP1Q4V328 841 aa22.11■■□□□ 1.13
CPSF7-225ENST00000545934 MAP1SQ66K74 1059 aaPredicted RBP22.11■■□□□ 1.13
CPSF7-225ENST00000545934 NGEFQ8N5V2 710 aa22.11■■□□□ 1.13
CPSF7-225ENST00000545934 JDP2Q8WYK2 163 aa22.11■■□□□ 1.13
CPSF7-225ENST00000545934 WBP1LQ9NX94 342 aa22.11■■□□□ 1.13
CPSF7-225ENST00000545934 SUSD4Q5VX71 490 aa22.1■■□□□ 1.13
CPSF7-225ENST00000545934 KIF6Q6ZMV9 814 aa22.1■■□□□ 1.13
CPSF7-225ENST00000545934 CRAMP1Q96RY5 1269 aa22.1■■□□□ 1.13
CPSF7-225ENST00000545934 RRP7AQ9Y3A4 280 aaKnown RBP22.1■■□□□ 1.13
CPSF7-225ENST00000545934 ERBB4Q15303 1308 aa22.09■■□□□ 1.13
CPSF7-225ENST00000545934 NTSR2O95665 410 aa22.09■■□□□ 1.13
CPSF7-225ENST00000545934 CTCFP49711 727 aaPredicted RBP22.09■■□□□ 1.13
CPSF7-225ENST00000545934 NFE2L2Q16236 605 aa22.09■■□□□ 1.13
CPSF7-225ENST00000545934 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
CPSF7-225ENST00000545934 RPGRQ92834 1020 aaKnown RBP22.09■■□□□ 1.13
CPSF7-225ENST00000545934 ZBTB3Q9H5J0 574 aa22.09■■□□□ 1.13
CPSF7-225ENST00000545934 TAF1P21675 1872 aa22.09■■□□□ 1.13
CPSF7-225ENST00000545934 MYL6BP14649 208 aa22.08■■□□□ 1.13
CPSF7-225ENST00000545934 GPTP24298 496 aa22.08■■□□□ 1.13
CPSF7-225ENST00000545934 SCNN1DP51172 638 aa22.08■■□□□ 1.13
CPSF7-225ENST00000545934 EIF6P56537 245 aaKnown RBP22.08■■□□□ 1.13
CPSF7-225ENST00000545934 DEFB115Q30KQ5 88 aa22.08■■□□□ 1.13
CPSF7-225ENST00000545934 GIGYF2Q6Y7W6 1299 aaKnown RBP22.08■■□□□ 1.13
CPSF7-225ENST00000545934 C3orf67Q6ZVT6 689 aa22.08■■□□□ 1.13
CPSF7-225ENST00000545934 LRP10Q7Z4F1 713 aa22.08■■□□□ 1.13
CPSF7-225ENST00000545934 THUMPD2Q9BTF0 503 aaKnown RBP22.08■■□□□ 1.13
CPSF7-225ENST00000545934 NEFMP07197 916 aa22.06■■□□□ 1.12
CPSF7-225ENST00000545934 AIDAQ96BJ3 306 aa22.06■■□□□ 1.12
CPSF7-225ENST00000545934 RBM17Q96I25 401 aaKnown RBP22.06■■□□□ 1.12
CPSF7-225ENST00000545934 PPEF1O14829 653 aaPredicted RBP22.05■■□□□ 1.12
CPSF7-225ENST00000545934 DDX21Q9NR30 783 aaKnown RBP eCLIP22.05■■□□□ 1.12
CPSF7-225ENST00000545934 GJA3Q9Y6H8 435 aa22.05■■□□□ 1.12
CPSF7-225ENST00000545934 LRRC37AA6NMS7 1700 aa22.05■■□□□ 1.12
CPSF7-225ENST00000545934 WDR33Q9C0J8 1336 aaKnown RBP22.05■■□□□ 1.12
CPSF7-225ENST00000545934 DDX60Q8IY21 1712 aaKnown RBP22.04■■□□□ 1.12
CPSF7-225ENST00000545934 EPS15P42566 896 aa22.04■■□□□ 1.12
CPSF7-225ENST00000545934 PDIA6Q15084 440 aa22.04■■□□□ 1.12
CPSF7-225ENST00000545934 SLC10A5Q5PT55 438 aa22.04■■□□□ 1.12
CPSF7-225ENST00000545934 LARGE2Q8N3Y3 721 aa22.04■■□□□ 1.12
CPSF7-225ENST00000545934 LMOD1P29536 600 aaPredicted RBP22.03■■□□□ 1.12
CPSF7-225ENST00000545934 PARP10Q53GL7 1025 aa22.03■■□□□ 1.12
CPSF7-225ENST00000545934 PPP1R42Q7Z4L9 355 aa22.03■■□□□ 1.12
CPSF7-225ENST00000545934 HSPA8P11142 646 aaKnown RBP22.02■■□□□ 1.12
CPSF7-225ENST00000545934 LBX1P52954 281 aa22.02■■□□□ 1.12
CPSF7-225ENST00000545934 USP50Q70EL3 339 aaPredicted RBP22.02■■□□□ 1.12
CPSF7-225ENST00000545934 VPS33BQ9H267 617 aa22.02■■□□□ 1.12
CPSF7-225ENST00000545934 FMR1Q06787 632 aaKnown RBP eCLIP22.01■■□□□ 1.11
CPSF7-225ENST00000545934 NLRP3Q96P20 1036 aa22.01■■□□□ 1.11
CPSF7-225ENST00000545934 ATP6V0A2Q9Y487 856 aa22.01■■□□□ 1.11
CPSF7-225ENST00000545934 MAP2K1Q02750 393 aaPredicted RBP22■■□□□ 1.11
CPSF7-225ENST00000545934 NIM1KQ8IY84 436 aa22■■□□□ 1.11
CPSF7-225ENST00000545934 RTFDC1Q9BY42 306 aaPredicted RBP22■■□□□ 1.11
CPSF7-225ENST00000545934 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
CPSF7-225ENST00000545934 ABT1Q9ULW3 272 aaKnown RBP22■■□□□ 1.11
CPSF7-225ENST00000545934 ABCC4O15439 1325 aa22■■□□□ 1.11
CPSF7-225ENST00000545934 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
CPSF7-225ENST00000545934 TCERG1O14776 1098 aaKnown RBP21.99■■□□□ 1.11
CPSF7-225ENST00000545934 CST9Q5W186 159 aa21.99■■□□□ 1.11
CPSF7-225ENST00000545934 BABAM1Q9NWV8 329 aa21.99■■□□□ 1.11
CPSF7-225ENST00000545934 MAPK8IP3Q9UPT6 1336 aa21.99■■□□□ 1.11
CPSF7-225ENST00000545934 PPIP5K2O43314 1243 aa21.98■■□□□ 1.11
CPSF7-225ENST00000545934 AOC3Q16853 763 aa21.98■■□□□ 1.11
CPSF7-225ENST00000545934 PROSER3Q2NL68 480 aa21.98■■□□□ 1.11
CPSF7-225ENST00000545934 UTP14AQ9BVJ6 771 aaKnown RBP21.98■■□□□ 1.11
CPSF7-225ENST00000545934 GPRC5DQ9NZD1 345 aa21.98■■□□□ 1.11
CPSF7-225ENST00000545934 TSPYL4Q9UJ04 414 aa21.98■■□□□ 1.11
CPSF7-225ENST00000545934 TRAF5O00463 557 aa21.96■■□□□ 1.11
CPSF7-225ENST00000545934 CAPNS2Q96L46 248 aa21.96■■□□□ 1.11
CPSF7-225ENST00000545934 ADARB2Q9NS39 739 aaKnown RBP21.96■■□□□ 1.11
CPSF7-225ENST00000545934 ZNRF3Q9ULT6 936 aa21.96■■□□□ 1.11
CPSF7-225ENST00000545934 CXCL9Q07325 125 aa21.95■■□□□ 1.1
CPSF7-225ENST00000545934 SP8Q8IXZ3 490 aa21.95■■□□□ 1.1
CPSF7-225ENST00000545934 SUPT20HQ8NEM7 779 aa21.95■■□□□ 1.1
CPSF7-225ENST00000545934 TLL2Q9Y6L7 1015 aa21.95■■□□□ 1.1
CPSF7-225ENST00000545934 POLR2AP24928 1970 aaKnown RBP21.95■■□□□ 1.1
CPSF7-225ENST00000545934 BBOX1O75936 387 aa21.94■■□□□ 1.1
CPSF7-225ENST00000545934 ANXA1P04083 346 aa21.94■■□□□ 1.1
CPSF7-225ENST00000545934 EIF2S2P20042 333 aaKnown RBP21.94■■□□□ 1.1
CPSF7-225ENST00000545934 ECE1P42892 770 aa21.94■■□□□ 1.1
CPSF7-225ENST00000545934 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
CPSF7-225ENST00000545934 PGAP2Q9UHJ9 254 aa21.94■■□□□ 1.1
CPSF7-225ENST00000545934 CDHR2Q9BYE9 1310 aa21.94■■□□□ 1.1
CPSF7-225ENST00000545934 CYP4F22Q6NT55 531 aa21.93■■□□□ 1.1
CPSF7-225ENST00000545934 RIPK4P57078 832 aa21.92■■□□□ 1.1
CPSF7-225ENST00000545934 KIAA2012Q0VF49 1180 aa21.92■■□□□ 1.1
CPSF7-225ENST00000545934 HSP90AB3PQ58FF7 597 aa21.92■■□□□ 1.1
CPSF7-225ENST00000545934 ABHD8Q96I13 439 aa21.92■■□□□ 1.1
CPSF7-225ENST00000545934 TMX4Q9H1E5 349 aaPredicted RBP21.92■■□□□ 1.1
CPSF7-225ENST00000545934 GMPSP49915 693 aaPredicted RBP21.91■■□□□ 1.1
CPSF7-225ENST00000545934 DPP8Q6V1X1 898 aaPredicted RBP21.91■■□□□ 1.1
CPSF7-225ENST00000545934 COPS6Q7L5N1 327 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms