RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
CNN3-207ENST00000545882 BICC1Q9H694 974 aaKnown RBP18.31■□□□□ 0.52
CNN3-207ENST00000545882 SNRKQ9NRH2 765 aa18.31■□□□□ 0.52
CNN3-207ENST00000545882 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
CNN3-207ENST00000545882 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
CNN3-207ENST00000545882 FIBPO43427 364 aa18.31■□□□□ 0.52
CNN3-207ENST00000545882 CREB3L3Q68CJ9 461 aa18.31■□□□□ 0.52
CNN3-207ENST00000545882 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
CNN3-207ENST00000545882 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
CNN3-207ENST00000545882 FUCA2Q9BTY2 467 aa18.31■□□□□ 0.52
CNN3-207ENST00000545882 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
CNN3-207ENST00000545882 DNM1Q05193 864 aaKnown RBP18.3■□□□□ 0.52
CNN3-207ENST00000545882 TPRNQ4KMQ1 711 aa18.3■□□□□ 0.52
CNN3-207ENST00000545882 CCDC8Q9H0W5 538 aaPredicted RBP18.3■□□□□ 0.52
CNN3-207ENST00000545882 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
CNN3-207ENST00000545882 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
CNN3-207ENST00000545882 IGKV5-2P06315 115 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 KRT28Q7Z3Y7 464 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
CNN3-207ENST00000545882 TPCN1Q9ULQ1 816 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 LETM1O95202 739 aaPredicted RBP18.29■□□□□ 0.52
CNN3-207ENST00000545882 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
CNN3-207ENST00000545882 CSPP1Q1MSJ5 1256 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
CNN3-207ENST00000545882 USP25Q9UHP3 1055 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 HDAC5Q9UQL6 1122 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 ATP6V1DQ9Y5K8 247 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 MRC1P22897 1456 aa18.29■□□□□ 0.52
CNN3-207ENST00000545882 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
CNN3-207ENST00000545882 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
CNN3-207ENST00000545882 SLC27A2O14975 620 aa18.28■□□□□ 0.52
CNN3-207ENST00000545882 DCCP43146 1447 aa18.28■□□□□ 0.52
CNN3-207ENST00000545882 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
CNN3-207ENST00000545882 G3BP1Q13283 466 aaKnown RBP eCLIP18.27■□□□□ 0.526e-7■■□□□ 12.4
CNN3-207ENST00000545882 ERBB3P21860 1342 aa18.27■□□□□ 0.52
CNN3-207ENST00000545882 PTMAP06454 111 aaKnown RBP18.27■□□□□ 0.51
CNN3-207ENST00000545882 TAF6LQ9Y6J9 622 aa18.27■□□□□ 0.51
CNN3-207ENST00000545882 JCADQ9P266 1359 aa18.27■□□□□ 0.51
CNN3-207ENST00000545882 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
CNN3-207ENST00000545882 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
CNN3-207ENST00000545882 MED23Q9ULK4 1368 aa18.26■□□□□ 0.51
CNN3-207ENST00000545882 ABCC6O95255 1503 aa18.26■□□□□ 0.51
CNN3-207ENST00000545882 COL18A1P39060 1754 aa18.26■□□□□ 0.51
CNN3-207ENST00000545882 HIP1O00291 1037 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 ADCY5O95622 1261 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 EPHA10Q5JZY3 1008 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 GIMAP6Q6P9H5 292 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 MPNDQ8N594 471 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 BOLA2Q9H3K6 86 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 DDX58O95786 925 aaKnown RBP18.25■□□□□ 0.51
CNN3-207ENST00000545882 SIL1Q9H173 461 aa18.25■□□□□ 0.51
CNN3-207ENST00000545882 UQCRHLA0A096LP55 91 aa18.24■□□□□ 0.51
CNN3-207ENST00000545882 VPS37CA5D8V6 355 aaPredicted RBP18.24■□□□□ 0.51
CNN3-207ENST00000545882 UQCRHP07919 91 aa18.24■□□□□ 0.51
CNN3-207ENST00000545882 ZNF830Q96NB3 372 aaPredicted RBP18.24■□□□□ 0.51
CNN3-207ENST00000545882 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
CNN3-207ENST00000545882 NEURL1BA8MQ27 555 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 AP5Z1O43299 807 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 KIAA2012Q0VF49 1180 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 LMOD2Q6P5Q4 547 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
CNN3-207ENST00000545882 PDCL3Q9H2J4 239 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 KDM4AO75164 1064 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 KCNJ4P48050 445 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 TOB2Q14106 344 aaPredicted RBP18.23■□□□□ 0.51
CNN3-207ENST00000545882 TTC6Q86TZ1 520 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
CNN3-207ENST00000545882 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 FSD1Q9BTV5 496 aa18.23■□□□□ 0.51
CNN3-207ENST00000545882 PSMA5P28066 241 aa18.22■□□□□ 0.51
CNN3-207ENST00000545882 RBM10P98175 930 aaKnown RBP18.22■□□□□ 0.51
CNN3-207ENST00000545882 GCKRQ14397 625 aa18.22■□□□□ 0.51
CNN3-207ENST00000545882 LARP1BQ659C4 914 aaKnown RBP18.22■□□□□ 0.51
CNN3-207ENST00000545882 ZNF790Q6PG37 636 aa18.22■□□□□ 0.51
CNN3-207ENST00000545882 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
CNN3-207ENST00000545882 CDC37L1Q7L3B6 337 aa18.22■□□□□ 0.51
CNN3-207ENST00000545882 RIC3Q7Z5B4 369 aa18.22■□□□□ 0.51
CNN3-207ENST00000545882 COL15A1P39059 1388 aa18.22■□□□□ 0.51
CNN3-207ENST00000545882 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
CNN3-207ENST00000545882 RPS6KB1P23443 525 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 SASS6Q6UVJ0 657 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 EDC3Q96F86 508 aaKnown RBP18.21■□□□□ 0.51
CNN3-207ENST00000545882 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 ARFGEF2Q9Y6D5 1785 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 TSGA10IPQ3SY00 556 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 FAM173BQ6P4H8 233 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 BLOC1S2Q6QNY1 142 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 LRP10Q7Z4F1 713 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 XAGE3Q8WTP9 111 aa18.21■□□□□ 0.51
CNN3-207ENST00000545882 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
CNN3-207ENST00000545882 MYL6BP14649 208 aa18.2■□□□□ 0.5
CNN3-207ENST00000545882 RFX5P48382 616 aaPredicted RBP18.2■□□□□ 0.5
CNN3-207ENST00000545882 PIBF1Q8WXW3 757 aa18.2■□□□□ 0.5
CNN3-207ENST00000545882 METTL22Q9BUU2 404 aaPredicted RBP18.2■□□□□ 0.5
CNN3-207ENST00000545882 TTC12Q9H892 705 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms