RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
LTBR-214ENST00000545445 ZNF330Q9Y3S2 320 aaPredicted RBP15.21■□□□□ 0.03
LTBR-214ENST00000545445 DICER1Q9UPY3 1922 aaKnown RBP15.21■□□□□ 0.02
LTBR-214ENST00000545445 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
LTBR-214ENST00000545445 VAMP4O75379 141 aa15.2■□□□□ 0.02
LTBR-214ENST00000545445 HSPA8P11142 646 aaKnown RBP15.2■□□□□ 0.02
LTBR-214ENST00000545445 HDGFL1Q5TGJ6 251 aa15.2■□□□□ 0.02
LTBR-214ENST00000545445 CCDC30Q5VVM6 783 aa15.2■□□□□ 0.02
LTBR-214ENST00000545445 TSPYL6Q8N831 410 aa15.2■□□□□ 0.02
LTBR-214ENST00000545445 L3MBTL3Q96JM7 780 aaPredicted RBP15.2■□□□□ 0.02
LTBR-214ENST00000545445 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
LTBR-214ENST00000545445 A0A087WZG4 1122 aa15.19■□□□□ 0.02
LTBR-214ENST00000545445 PRAMEF22A3QJZ6 481 aa15.19■□□□□ 0.02
LTBR-214ENST00000545445 ITGBL1O95965 494 aaPredicted RBP15.19■□□□□ 0.02
LTBR-214ENST00000545445 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
LTBR-214ENST00000545445 TBC1D2BQ9UPU7 963 aa15.19■□□□□ 0.02
LTBR-214ENST00000545445 NPHP1O15259 732 aa15.18■□□□□ 0.02
LTBR-214ENST00000545445 EIF2S2P20042 333 aaKnown RBP15.18■□□□□ 0.02
LTBR-214ENST00000545445 STYK1Q6J9G0 422 aa15.18■□□□□ 0.02
LTBR-214ENST00000545445 CNKSR1Q969H4 720 aa15.18■□□□□ 0.02
LTBR-214ENST00000545445 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
LTBR-214ENST00000545445 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
LTBR-214ENST00000545445 SLX4Q8IY92 1834 aa15.17■□□□□ 0.02
LTBR-214ENST00000545445 SRGNP10124 158 aa15.17■□□□□ 0.02
LTBR-214ENST00000545445 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
LTBR-214ENST00000545445 DDX21Q9NR30 783 aaKnown RBP eCLIP15.17■□□□□ 0.02
LTBR-214ENST00000545445 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
LTBR-214ENST00000545445 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
LTBR-214ENST00000545445 RASSF10A6NK89 507 aa15.16■□□□□ 0.02
LTBR-214ENST00000545445 A1BGP04217 495 aa15.16■□□□□ 0.02
LTBR-214ENST00000545445 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
LTBR-214ENST00000545445 ST5P78524 1137 aa15.16■□□□□ 0.02
LTBR-214ENST00000545445 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
LTBR-214ENST00000545445 MAP1SQ66K74 1059 aaPredicted RBP15.16■□□□□ 0.02
LTBR-214ENST00000545445 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
LTBR-214ENST00000545445 HACL1Q9UJ83 578 aa15.16■□□□□ 0.02
LTBR-214ENST00000545445 EPHX2P34913 555 aa15.15■□□□□ 0.02
LTBR-214ENST00000545445 CCDC93Q567U6 631 aa15.15■□□□□ 0.02
LTBR-214ENST00000545445 MASTLQ96GX5 879 aa15.15■□□□□ 0.02
LTBR-214ENST00000545445 SETDB2Q96T68 719 aa15.15■□□□□ 0.02
LTBR-214ENST00000545445 ZNF277Q9NRM2 450 aaPredicted RBP15.15■□□□□ 0.02
LTBR-214ENST00000545445 HYPKQ9NX55 129 aa15.15■□□□□ 0.02
LTBR-214ENST00000545445 ADAMTSL1Q8N6G6 1762 aa15.15■□□□□ 0.02
LTBR-214ENST00000545445 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
LTBR-214ENST00000545445 CACNA1SQ13698 1873 aa15.14■□□□□ 0.01
LTBR-214ENST00000545445 CAMTA2O94983 1202 aa15.14■□□□□ 0.01
LTBR-214ENST00000545445 DEFB115Q30KQ5 88 aa15.14■□□□□ 0.01
LTBR-214ENST00000545445 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
LTBR-214ENST00000545445 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
LTBR-214ENST00000545445 CHPF2Q9P2E5 772 aa15.14■□□□□ 0.01
LTBR-214ENST00000545445 ABT1Q9ULW3 272 aaKnown RBP15.14■□□□□ 0.01
LTBR-214ENST00000545445 SCN4AP35499 1836 aa15.14■□□□□ 0.01
LTBR-214ENST00000545445 WDR33Q9C0J8 1336 aaKnown RBP15.14■□□□□ 0.01
LTBR-214ENST00000545445 ARFGEF2Q9Y6D5 1785 aa15.13■□□□□ 0.01
LTBR-214ENST00000545445 CCDC85CA6NKD9 419 aa15.13■□□□□ 0.01
LTBR-214ENST00000545445 NBPF26B4DH59 902 aa15.13■□□□□ 0.01
LTBR-214ENST00000545445 PDIA6Q15084 440 aa15.13■□□□□ 0.01
LTBR-214ENST00000545445 NBPF10Q6P3W6 841 aaKnown RBP15.13■□□□□ 0.01
LTBR-214ENST00000545445 CNTROBQ8N137 903 aa15.13■□□□□ 0.01
LTBR-214ENST00000545445 NBPF15Q8N660 670 aa15.13■□□□□ 0.01
LTBR-214ENST00000545445 NECTIN2Q92692 538 aa15.13■□□□□ 0.01
LTBR-214ENST00000545445 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
LTBR-214ENST00000545445 RARSP54136 660 aaKnown RBP15.12■□□□□ 0.01
LTBR-214ENST00000545445 BRPF1P55201 1214 aaPredicted RBP15.12■□□□□ 0.01
LTBR-214ENST00000545445 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
LTBR-214ENST00000545445 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
LTBR-214ENST00000545445 MLLT1Q03111 559 aaPredicted RBP15.12■□□□□ 0.01
LTBR-214ENST00000545445 MYL6BP14649 208 aa15.11■□□□□ 0.01
LTBR-214ENST00000545445 RGL2O15211 777 aa15.1■□□□□ 0.01
LTBR-214ENST00000545445 GRM1Q13255 1194 aa15.1■□□□□ 0.01
LTBR-214ENST00000545445 PAXIP1Q6ZW49 1069 aaPredicted RBP15.1■□□□□ 0.01
LTBR-214ENST00000545445 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
LTBR-214ENST00000545445 PNMA8AQ86V59 439 aaPredicted RBP15.1■□□□□ 0.01
LTBR-214ENST00000545445 NBPF5PQ86XG9 351 aaPredicted RBP15.1■□□□□ 0.01
LTBR-214ENST00000545445 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
LTBR-214ENST00000545445 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
LTBR-214ENST00000545445 SMC4Q9NTJ3 1288 aa15.1■□□□□ 0.01
LTBR-214ENST00000545445 THSD7BQ9C0I4 1608 aa15.1■□□□□ 0.01
LTBR-214ENST00000545445 BCORQ6W2J9 1755 aa15.09■□□□□ 0.01
LTBR-214ENST00000545445 DDX58O95786 925 aaKnown RBP15.09■□□□□ 0.01
LTBR-214ENST00000545445 NPR1P16066 1061 aa15.09■□□□□ 0.01
LTBR-214ENST00000545445 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
LTBR-214ENST00000545445 FMR1Q06787 632 aaKnown RBP eCLIP15.09■□□□□ 0.01
LTBR-214ENST00000545445 PROSER3Q2NL68 480 aa15.09■□□□□ 0.01
LTBR-214ENST00000545445 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
LTBR-214ENST00000545445 CAPNS2Q96L46 248 aa15.09■□□□□ 0.01
LTBR-214ENST00000545445 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
LTBR-214ENST00000545445 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
LTBR-214ENST00000545445 ANXA1P04083 346 aa15.08■□□□□ 0
LTBR-214ENST00000545445 IARSP41252 1262 aaKnown RBP15.08■□□□□ 0
LTBR-214ENST00000545445 KIF6Q6ZMV9 814 aa15.08■□□□□ 0
LTBR-214ENST00000545445 COPS6Q7L5N1 327 aa15.08■□□□□ 0
LTBR-214ENST00000545445 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
LTBR-214ENST00000545445 KIF16BQ96L93 1317 aa15.08■□□□□ 0
LTBR-214ENST00000545445 CACNA1FO60840 1977 aa15.07■□□□□ 0
LTBR-214ENST00000545445 ERVV-1B6SEH8 477 aa15.07■□□□□ 0
LTBR-214ENST00000545445 FZD9O00144 591 aa15.07■□□□□ 0
LTBR-214ENST00000545445 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
LTBR-214ENST00000545445 FLIIQ13045 1269 aa15.07■□□□□ 0
LTBR-214ENST00000545445 CYP4F22Q6NT55 531 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms