RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MAP2K2P36507 400 aa19.74■□□□□ 0.75
RTN3-214ENST00000545432 FMR1Q06787 632 aaKnown RBP eCLIP19.74■□□□□ 0.75
RTN3-214ENST00000545432 GPR101Q96P66 508 aaPredicted RBP19.74■□□□□ 0.75
RTN3-214ENST00000545432 TLL2Q9Y6L7 1015 aa19.74■□□□□ 0.75
RTN3-214ENST00000545432 CRAMP1Q96RY5 1269 aa19.73■□□□□ 0.75
RTN3-214ENST00000545432 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
RTN3-214ENST00000545432 NYXQ9GZU5 481 aa19.73■□□□□ 0.75
RTN3-214ENST00000545432 VPS33BQ9H267 617 aa19.73■□□□□ 0.75
RTN3-214ENST00000545432 ABCC12Q96J65 1359 aa19.72■□□□□ 0.75
RTN3-214ENST00000545432 IBTKQ9P2D0 1353 aaPredicted RBP19.72■□□□□ 0.75
RTN3-214ENST00000545432 MCM10Q7L590 875 aa19.72■□□□□ 0.75
RTN3-214ENST00000545432 LMOD1P29536 600 aaPredicted RBP19.71■□□□□ 0.75
RTN3-214ENST00000545432 CYP4F22Q6NT55 531 aa19.71■□□□□ 0.75
RTN3-214ENST00000545432 HHIPL1Q96JK4 782 aa19.71■□□□□ 0.75
RTN3-214ENST00000545432 PGAP2Q9UHJ9 254 aa19.71■□□□□ 0.75
RTN3-214ENST00000545432 FAM177BA6PVY3 158 aa19.7■□□□□ 0.74
RTN3-214ENST00000545432 GTF2E1P29083 439 aaPredicted RBP19.7■□□□□ 0.74
RTN3-214ENST00000545432 MLLT1Q03111 559 aaPredicted RBP19.7■□□□□ 0.74
RTN3-214ENST00000545432 TAF7Q15545 349 aaPredicted RBP19.7■□□□□ 0.74
RTN3-214ENST00000545432 RTF1Q92541 710 aaKnown RBP19.7■□□□□ 0.74
RTN3-214ENST00000545432 GJA3Q9Y6H8 435 aa19.7■□□□□ 0.74
RTN3-214ENST00000545432 SAPCD2Q86UD0 394 aa19.69■□□□□ 0.74
RTN3-214ENST00000545432 NUTM1Q86Y26 1132 aa19.69■□□□□ 0.74
RTN3-214ENST00000545432 LARGE2Q8N3Y3 721 aa19.69■□□□□ 0.74
RTN3-214ENST00000545432 PCDH10Q9P2E7 1040 aa19.69■□□□□ 0.74
RTN3-214ENST00000545432 TRAF5O00463 557 aa19.68■□□□□ 0.74
RTN3-214ENST00000545432 CA12O43570 354 aa19.68■□□□□ 0.74
RTN3-214ENST00000545432 BEGAINQ9BUH8 593 aa19.68■□□□□ 0.74
RTN3-214ENST00000545432 NUDCQ9Y266 331 aa19.68■□□□□ 0.74
RTN3-214ENST00000545432 MAP3K15Q6ZN16 1313 aa19.68■□□□□ 0.74
RTN3-214ENST00000545432 DCTN1Q14203 1278 aa19.67■□□□□ 0.74
RTN3-214ENST00000545432 ZNF34Q8IZ26 560 aa19.67■□□□□ 0.74
RTN3-214ENST00000545432 RTFDC1Q9BY42 306 aaPredicted RBP19.67■□□□□ 0.74
RTN3-214ENST00000545432 ADARB2Q9NS39 739 aaKnown RBP19.67■□□□□ 0.74
RTN3-214ENST00000545432 GPRC5DQ9NZD1 345 aa19.67■□□□□ 0.74
RTN3-214ENST00000545432 UBN2Q6ZU65 1347 aa19.67■□□□□ 0.74
RTN3-214ENST00000545432 CCDC85CA6NKD9 419 aa19.66■□□□□ 0.74
RTN3-214ENST00000545432 SUSD4Q5VX71 490 aa19.66■□□□□ 0.74
RTN3-214ENST00000545432 RBM17Q96I25 401 aaKnown RBP19.66■□□□□ 0.74
RTN3-214ENST00000545432 CFAP53Q96M91 514 aa19.66■□□□□ 0.74
RTN3-214ENST00000545432 NTSR2O95665 410 aa19.65■□□□□ 0.74
RTN3-214ENST00000545432 SLC10A5Q5PT55 438 aa19.65■□□□□ 0.74
RTN3-214ENST00000545432 TTLL7Q6ZT98 887 aa19.65■□□□□ 0.74
RTN3-214ENST00000545432 SLC51AQ86UW1 340 aa19.65■□□□□ 0.74
RTN3-214ENST00000545432 RPGRQ92834 1020 aaKnown RBP19.65■□□□□ 0.74
RTN3-214ENST00000545432 TRPM7Q96QT4 1865 aa19.65■□□□□ 0.74
RTN3-214ENST00000545432 AOC2O75106 756 aa19.64■□□□□ 0.73
RTN3-214ENST00000545432 BRPF1P55201 1214 aaPredicted RBP19.64■□□□□ 0.73
RTN3-214ENST00000545432 NIM1KQ8IY84 436 aa19.64■□□□□ 0.73
RTN3-214ENST00000545432 ZC3H15Q8WU90 426 aaKnown RBP19.64■□□□□ 0.73
RTN3-214ENST00000545432 ATP6V0A2Q9Y487 856 aa19.64■□□□□ 0.73
RTN3-214ENST00000545432 CDHR2Q9BYE9 1310 aa19.63■□□□□ 0.73
RTN3-214ENST00000545432 PPEF1O14829 653 aaPredicted RBP19.63■□□□□ 0.73
RTN3-214ENST00000545432 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
RTN3-214ENST00000545432 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
RTN3-214ENST00000545432 CXCL9Q07325 125 aa19.63■□□□□ 0.73
RTN3-214ENST00000545432 GIGYF2Q6Y7W6 1299 aaKnown RBP19.63■□□□□ 0.73
RTN3-214ENST00000545432 C3orf67Q6ZVT6 689 aa19.63■□□□□ 0.73
RTN3-214ENST00000545432 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
RTN3-214ENST00000545432 ZNRF3Q9ULT6 936 aa19.63■□□□□ 0.73
RTN3-214ENST00000545432 EIF4A1P60842 406 aaKnown RBP19.62■□□□□ 0.73
RTN3-214ENST00000545432 MCOLN1Q9GZU1 580 aa19.62■□□□□ 0.73
RTN3-214ENST00000545432 MIS18AQ9NYP9 233 aa19.62■□□□□ 0.73
RTN3-214ENST00000545432 PPIP5K2O43314 1243 aa19.61■□□□□ 0.73
RTN3-214ENST00000545432 CELF2O95319 508 aaKnown RBP19.61■□□□□ 0.73
RTN3-214ENST00000545432 HIRAP54198 1017 aaPredicted RBP19.61■□□□□ 0.73
RTN3-214ENST00000545432 PAXIP1Q6ZW49 1069 aaPredicted RBP19.61■□□□□ 0.73
RTN3-214ENST00000545432 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
RTN3-214ENST00000545432 NUP98P52948 1817 aa19.6■□□□□ 0.73
RTN3-214ENST00000545432 AOC3Q16853 763 aa19.6■□□□□ 0.73
RTN3-214ENST00000545432 PARP10Q53GL7 1025 aa19.6■□□□□ 0.73
RTN3-214ENST00000545432 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
RTN3-214ENST00000545432 GPTP24298 496 aa19.59■□□□□ 0.73
RTN3-214ENST00000545432 KIF6Q6ZMV9 814 aa19.59■□□□□ 0.73
RTN3-214ENST00000545432 NGEFQ8N5V2 710 aa19.59■□□□□ 0.73
RTN3-214ENST00000545432 SUPT20HQ8NEM7 779 aa19.59■□□□□ 0.73
RTN3-214ENST00000545432 NLRP3Q96P20 1036 aa19.59■□□□□ 0.73
RTN3-214ENST00000545432 GLIS2Q9BZE0 524 aaPredicted RBP19.59■□□□□ 0.73
RTN3-214ENST00000545432 TSKSQ9UJT2 592 aa19.59■□□□□ 0.73
RTN3-214ENST00000545432 LAMB4A4D0S4 1761 aa19.58■□□□□ 0.73
RTN3-214ENST00000545432 BBOX1O75936 387 aa19.58■□□□□ 0.72
RTN3-214ENST00000545432 PPP2R1AP30153 589 aa19.58■□□□□ 0.72
RTN3-214ENST00000545432 GMPSP49915 693 aaPredicted RBP19.58■□□□□ 0.72
RTN3-214ENST00000545432 KIAA2012Q0VF49 1180 aa19.58■□□□□ 0.72
RTN3-214ENST00000545432 CDC37L1Q7L3B6 337 aa19.58■□□□□ 0.72
RTN3-214ENST00000545432 PPP1R42Q7Z4L9 355 aa19.58■□□□□ 0.72
RTN3-214ENST00000545432 SP8Q8IXZ3 490 aa19.58■□□□□ 0.72
RTN3-214ENST00000545432 RRP7AQ9Y3A4 280 aaKnown RBP19.58■□□□□ 0.72
RTN3-214ENST00000545432 GRM1Q13255 1194 aa19.57■□□□□ 0.72
RTN3-214ENST00000545432 CIAPIN1Q6FI81 312 aa19.57■□□□□ 0.72
RTN3-214ENST00000545432 ZBTB3Q9H5J0 574 aa19.57■□□□□ 0.72
RTN3-214ENST00000545432 PDIA6Q15084 440 aa19.56■□□□□ 0.72
RTN3-214ENST00000545432 ABCC4O15439 1325 aa19.55■□□□□ 0.72
RTN3-214ENST00000545432 TCERG1O14776 1098 aaKnown RBP19.55■□□□□ 0.72
RTN3-214ENST00000545432 NOGQ13253 232 aa19.55■□□□□ 0.72
RTN3-214ENST00000545432 TNIP1Q15025 636 aa19.55■□□□□ 0.72
RTN3-214ENST00000545432 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
RTN3-214ENST00000545432 MYL6BP14649 208 aa19.54■□□□□ 0.72
RTN3-214ENST00000545432 CNGB1Q14028 1251 aaPredicted RBP19.54■□□□□ 0.72
RTN3-214ENST00000545432 ZIC5Q96T25 663 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms