RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 GNAI3P08754 354 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 CABP4P57796 275 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 NUCB1Q02818 461 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 TYW1BQ6NUM6 668 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 SKAP1Q86WV1 359 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 FMNL2Q96PY5 1086 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 MEIS3Q99687 375 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 CDCA7Q9BWT1 371 aaPredicted RBP6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 C1orf115Q9H7X2 142 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 HYPKQ9NX55 129 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 ADCY9O60503 1353 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 DDX58O95786 925 aaKnown RBP6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 GNAI2P04899 355 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 SNRPA1P09661 255 aaKnown RBP6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 EIF2S2P20042 333 aaKnown RBP6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 PTPREP23469 700 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 ANP32AP39687 249 aaKnown RBP6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 CEP85Q6P2H3 762 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 SLC4A10Q6U841 1118 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 CHD1LQ86WJ1 897 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 DNAAF4Q8WXU2 420 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 NECTIN2Q92692 538 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 ARHGEF1Q92888 912 aaKnown RBP6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 DDX21Q9NR30 783 aaKnown RBP eCLIP6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 THRAP3Q9Y2W1 955 aaKnown RBP6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 JCADQ9P266 1359 aa6.82□□□□□ -1.32
NPIPB3-214ENST00000545358 DOT1LQ8TEK3 1739 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 ITGB4P16144 1822 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 CICQ96RK0 1608 aaPredicted RBP6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 ALDH1L1O75891 902 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 SLC39A6Q13433 755 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 ANKRD13DQ6ZTN6 518 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 SIRT2Q8IXJ6 389 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 SRCIN1Q9C0H9 1055 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 PHAXQ9H814 394 aaKnown RBP6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 ARFGEF2Q9Y6D5 1785 aa6.81□□□□□ -1.32
NPIPB3-214ENST00000545358 UBTFL1P0CB47 393 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 NUP188Q5SRE5 1749 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 BEND3Q5T5X7 828 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 POTEEQ6S8J3 1075 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 KSR2Q6VAB6 950 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 ZNF496Q96IT1 587 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 KCNK17Q96T54 332 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 DCTPP1Q9H773 170 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 PCDHGA10Q9Y5H3 936 aa6.8□□□□□ -1.32
NPIPB3-214ENST00000545358 SPATA31A1Q5TZJ5 1347 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 BCL9O00512 1426 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 PI4KAP2A4QPH2 592 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 UBAP1LF5GYI3 381 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 PIP4K2BP78356 416 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 MMRN1Q13201 1228 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 PROSER3Q2NL68 480 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 PI4KAP1Q8N8J0 262 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 SLC4A5Q9BY07 1137 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 TMOD3Q9NYL9 352 aa6.79□□□□□ -1.32
NPIPB3-214ENST00000545358 SPATA31A5Q5VU36 1347 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 SPATA31A6Q5VVP1 1343 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 SPATA31A7Q8IWB4 1347 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 AFDNP55196 1824 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 ANXA1P04083 346 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 ATP8B2P98198 1209 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 BMP2KLQ5H9B9 411 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 ANKRD45Q5TZF3 282 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 ADGRD1Q6QNK2 874 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 BARGINQ6ZT62 677 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 LRP10Q7Z4F1 713 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 VSIG10Q8N0Z9 540 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 LINS1Q8NG48 757 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 DDX54Q8TDD1 881 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 LNPKQ9C0E8 428 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 USP44Q9H0E7 712 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 USP35Q9P2H5 1018 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 MAP3K2Q9Y2U5 619 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 LRRFIP2Q9Y608 721 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 COL15A1P39059 1388 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 TJP1Q07157 1748 aa6.78□□□□□ -1.32
NPIPB3-214ENST00000545358 THSD7AQ9UPZ6 1657 aa6.77□□□□□ -1.32
NPIPB3-214ENST00000545358 UTYO14607 1347 aa6.77□□□□□ -1.32
NPIPB3-214ENST00000545358 PPP1R3GB7ZBB8 358 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 EXOC5O00471 708 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 EIF5BO60841 1220 aaKnown RBP6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 ADAMTS2O95450 1211 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 PSEN2P49810 448 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 NEXNQ0ZGT2 675 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 MTX1Q13505 466 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 KCNV2Q8TDN2 545 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 SSH3Q8TE77 659 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 XAGE3Q8WTP9 111 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 DDRGK1Q96HY6 314 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 TEX13AQ9BXU3 409 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 ADAM33Q9BZ11 813 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 USP16Q9Y5T5 823 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 ZNF831Q5JPB2 1677 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 RREB1Q92766 1687 aa6.77□□□□□ -1.33
NPIPB3-214ENST00000545358 TUBGCP6Q96RT7 1819 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms