RNA–Protein interactions for RNA: ENST00000544943.5

TULP3-207, Transcript of tubby like protein 3, humanhuman

TSL 4

Gene TULP3, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-207ENST00000544943 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
TULP3-207ENST00000544943 JDP2Q8WYK2 163 aa17.14■□□□□ 0.33
TULP3-207ENST00000544943 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
TULP3-207ENST00000544943 TAF1DQ9H5J8 278 aaPredicted RBP17.14■□□□□ 0.33
TULP3-207ENST00000544943 CREBZFQ9NS37 354 aa17.14■□□□□ 0.33
TULP3-207ENST00000544943 NTSR2O95665 410 aa17.13■□□□□ 0.33
TULP3-207ENST00000544943 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
TULP3-207ENST00000544943 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
TULP3-207ENST00000544943 PDIA6Q15084 440 aa17.12■□□□□ 0.33
TULP3-207ENST00000544943 PNMA8AQ86V59 439 aaPredicted RBP17.12■□□□□ 0.33
TULP3-207ENST00000544943 GPC2Q8N158 579 aa17.12■□□□□ 0.33
TULP3-207ENST00000544943 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
TULP3-207ENST00000544943 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
TULP3-207ENST00000544943 ZNF541Q9H0D2 1346 aa17.12■□□□□ 0.33
TULP3-207ENST00000544943 PCNTO95613 3336 aa17.12■□□□□ 0.33
TULP3-207ENST00000544943 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
TULP3-207ENST00000544943 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
TULP3-207ENST00000544943 SLC10A5Q5PT55 438 aa17.11■□□□□ 0.33
TULP3-207ENST00000544943 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
TULP3-207ENST00000544943 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
TULP3-207ENST00000544943 HOXB7P09629 217 aa17.1■□□□□ 0.33
TULP3-207ENST00000544943 WDR43Q15061 677 aaKnown RBP eCLIP17.1■□□□□ 0.33
TULP3-207ENST00000544943 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
TULP3-207ENST00000544943 VPS33BQ9H267 617 aa17.1■□□□□ 0.33
TULP3-207ENST00000544943 PASKQ96RG2 1323 aa17.1■□□□□ 0.33
TULP3-207ENST00000544943 CHL1O00533 1208 aa17.09■□□□□ 0.33
TULP3-207ENST00000544943 PPEF1O14829 653 aaPredicted RBP17.09■□□□□ 0.33
TULP3-207ENST00000544943 POTEIP0CG38 1075 aa17.09■□□□□ 0.33
TULP3-207ENST00000544943 POTEJP0CG39 1038 aa17.09■□□□□ 0.33
TULP3-207ENST00000544943 EPHX2P34913 555 aa17.09■□□□□ 0.33
TULP3-207ENST00000544943 EIF6P56537 245 aaKnown RBP17.09■□□□□ 0.33
TULP3-207ENST00000544943 DDX21Q9NR30 783 aaKnown RBP eCLIP17.09■□□□□ 0.33
TULP3-207ENST00000544943 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
TULP3-207ENST00000544943 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
TULP3-207ENST00000544943 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
TULP3-207ENST00000544943 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
TULP3-207ENST00000544943 ATP6V0A2Q9Y487 856 aa17.07■□□□□ 0.32
TULP3-207ENST00000544943 BBOX1O75936 387 aa17.06■□□□□ 0.32
TULP3-207ENST00000544943 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
TULP3-207ENST00000544943 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
TULP3-207ENST00000544943 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
TULP3-207ENST00000544943 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
TULP3-207ENST00000544943 EAPPQ56P03 285 aaPredicted RBP17.06■□□□□ 0.32
TULP3-207ENST00000544943 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
TULP3-207ENST00000544943 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
TULP3-207ENST00000544943 SUPT20HQ8NEM7 779 aa17.06■□□□□ 0.32
TULP3-207ENST00000544943 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
TULP3-207ENST00000544943 CNTNAP1P78357 1384 aa17.05■□□□□ 0.32
TULP3-207ENST00000544943 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
TULP3-207ENST00000544943 ITGBL1O95965 494 aaPredicted RBP17.05■□□□□ 0.32
TULP3-207ENST00000544943 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
TULP3-207ENST00000544943 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
TULP3-207ENST00000544943 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
TULP3-207ENST00000544943 ANXA1P04083 346 aa17.04■□□□□ 0.32
TULP3-207ENST00000544943 NEUROD2Q15784 382 aa17.04■□□□□ 0.32
TULP3-207ENST00000544943 C3orf67Q6ZVT6 689 aa17.04■□□□□ 0.32
TULP3-207ENST00000544943 TMC4Q7Z404 712 aa17.04■□□□□ 0.32
TULP3-207ENST00000544943 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
TULP3-207ENST00000544943 RTFDC1Q9BY42 306 aaPredicted RBP17.04■□□□□ 0.32
TULP3-207ENST00000544943 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
TULP3-207ENST00000544943 ABCC4O15439 1325 aa17.03■□□□□ 0.32
TULP3-207ENST00000544943 LAMB2P55268 1798 aa17.03■□□□□ 0.32
TULP3-207ENST00000544943 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
TULP3-207ENST00000544943 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
TULP3-207ENST00000544943 HDGFL1Q5TGJ6 251 aa17.03■□□□□ 0.32
TULP3-207ENST00000544943 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
TULP3-207ENST00000544943 DBF4Q9UBU7 674 aaPredicted RBP17.03■□□□□ 0.32
TULP3-207ENST00000544943 TRMT112Q9UI30 125 aaKnown RBP17.03■□□□□ 0.32
TULP3-207ENST00000544943 COL4A5P29400 1685 aa17.03■□□□□ 0.32
TULP3-207ENST00000544943 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
TULP3-207ENST00000544943 DDX46Q7L014 1031 aaKnown RBP17.02■□□□□ 0.32
TULP3-207ENST00000544943 SP8Q8IXZ3 490 aa17.02■□□□□ 0.32
TULP3-207ENST00000544943 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
TULP3-207ENST00000544943 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
TULP3-207ENST00000544943 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
TULP3-207ENST00000544943 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
TULP3-207ENST00000544943 GJA3Q9Y6H8 435 aa17.02■□□□□ 0.32
TULP3-207ENST00000544943 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
TULP3-207ENST00000544943 USP50Q70EL3 339 aaPredicted RBP17.01■□□□□ 0.31
TULP3-207ENST00000544943 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
TULP3-207ENST00000544943 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
TULP3-207ENST00000544943 CHPF2Q9P2E5 772 aa17.01■□□□□ 0.31
TULP3-207ENST00000544943 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
TULP3-207ENST00000544943 CDHR2Q9BYE9 1310 aa17■□□□□ 0.31
TULP3-207ENST00000544943 SCNN1DP51172 638 aa17■□□□□ 0.31
TULP3-207ENST00000544943 GRAPQ13588 217 aa17■□□□□ 0.31
TULP3-207ENST00000544943 DPP8Q6V1X1 898 aaPredicted RBP17■□□□□ 0.31
TULP3-207ENST00000544943 ANKRD13DQ6ZTN6 518 aa17■□□□□ 0.31
TULP3-207ENST00000544943 TNS4Q8IZW8 715 aa17■□□□□ 0.31
TULP3-207ENST00000544943 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
TULP3-207ENST00000544943 CHMP4AQ9BY43 222 aa17■□□□□ 0.31
TULP3-207ENST00000544943 PRKRIP1Q9H875 184 aaPredicted RBP17■□□□□ 0.31
TULP3-207ENST00000544943 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
TULP3-207ENST00000544943 LTBP1Q14766 1721 aa16.99■□□□□ 0.31
TULP3-207ENST00000544943 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
TULP3-207ENST00000544943 HCLS1P14317 486 aaPredicted RBP16.99■□□□□ 0.31
TULP3-207ENST00000544943 AOC3Q16853 763 aa16.99■□□□□ 0.31
TULP3-207ENST00000544943 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
TULP3-207ENST00000544943 MPNDQ8N594 471 aa16.99■□□□□ 0.31
TULP3-207ENST00000544943 RASSF10A6NK89 507 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms