RNA–Protein interactions for RNA: ENST00000544916.5

PHC1-214, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 3,626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-214ENST00000544916 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
PHC1-214ENST00000544916 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
PHC1-214ENST00000544916 INTS4Q96HW7 963 aaKnown RBP12.11□□□□□ -0.47
PHC1-214ENST00000544916 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
PHC1-214ENST00000544916 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
PHC1-214ENST00000544916 ZNF215Q9UL58 517 aaPredicted RBP12.11□□□□□ -0.47
PHC1-214ENST00000544916 KINO60870 393 aaKnown RBP12.1□□□□□ -0.47
PHC1-214ENST00000544916 FAM227BQ96M60 508 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 SPATA31D1Q6ZQQ2 1576 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 NRDCO43847 1150 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 HOXC9P31274 260 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
PHC1-214ENST00000544916 KLHDC4Q8TBB5 520 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 SHPRHQ149N8 1683 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 LRRC7Q96NW7 1537 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
PHC1-214ENST00000544916 JAK2O60674 1132 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 ME3Q16798 604 aa12.1□□□□□ -0.47
PHC1-214ENST00000544916 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
PHC1-214ENST00000544916 PLEKHG1Q9ULL1 1385 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
PHC1-214ENST00000544916 CHST3Q7LGC8 479 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 MNS1Q8NEH6 495 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
PHC1-214ENST00000544916 RBM8AQ9Y5S9 174 aaKnown RBP12.09□□□□□ -0.47
PHC1-214ENST00000544916 AGLP35573 1532 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 PDILTQ8N807 584 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 GTPBP4Q9BZE4 634 aaKnown RBP12.09□□□□□ -0.47
PHC1-214ENST00000544916 ATP7BP35670 1465 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 CUL4AQ13619 759 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 CACTINQ8WUQ7 758 aaKnown RBP12.09□□□□□ -0.47
PHC1-214ENST00000544916 KIF1BPQ96EK5 621 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
PHC1-214ENST00000544916 PTPRCP08575 1304 aa12.08□□□□□ -0.48
PHC1-214ENST00000544916 NR1I2O75469 434 aa12.08□□□□□ -0.48
PHC1-214ENST00000544916 NEUROD6Q96NK8 337 aa12.08□□□□□ -0.48
PHC1-214ENST00000544916 USP6P35125 1406 aa12.08□□□□□ -0.48
PHC1-214ENST00000544916 CHL1O00533 1208 aa12.08□□□□□ -0.48
PHC1-214ENST00000544916 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
PHC1-214ENST00000544916 NEURL4Q96JN8 1562 aa12.08□□□□□ -0.48
PHC1-214ENST00000544916 SGSM2O43147 1006 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 ANAPC15P60006 121 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
PHC1-214ENST00000544916 TPM3P06753 285 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 HSPA4P34932 840 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 USP27XA6NNY8 438 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 ZNF853P0CG23 659 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 SLC39A6Q13433 755 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
PHC1-214ENST00000544916 BRF1Q92994 677 aa12.07□□□□□ -0.48
PHC1-214ENST00000544916 PRAMEF22A3QJZ6 481 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 CCDC69A6NI79 296 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
PHC1-214ENST00000544916 URI1O94763 535 aaPredicted RBP12.06□□□□□ -0.48
PHC1-214ENST00000544916 POLR3DP05423 398 aaPredicted RBP12.06□□□□□ -0.48
PHC1-214ENST00000544916 PDCP20941 246 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
PHC1-214ENST00000544916 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 ZSCAN25Q6NSZ9 544 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 IL17REQ8NFR9 667 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 COL3A1P02461 1466 aaPredicted RBP12.06□□□□□ -0.48
PHC1-214ENST00000544916 MYL6BP14649 208 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 AOPEPQ8N6M6 819 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 FAM135BQ49AJ0 1406 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 GLRX3O76003 335 aaKnown RBP12.06□□□□□ -0.48
PHC1-214ENST00000544916 SYT10Q6XYQ8 523 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 CERS3Q8IU89 383 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 USP44Q9H0E7 712 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 TPCN1Q9ULQ1 816 aa12.06□□□□□ -0.48
PHC1-214ENST00000544916 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
PHC1-214ENST00000544916 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 KRT222Q8N1A0 295 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 KIF18AQ8NI77 898 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 KIF20AO95235 890 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 OTUD7BQ6GQQ9 843 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 GCP02774 474 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 ATF3P18847 181 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
PHC1-214ENST00000544916 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
PHC1-214ENST00000544916 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 RAD50Q92878 1312 aa12.05□□□□□ -0.48
PHC1-214ENST00000544916 ZNF75DP51815 510 aa12.04□□□□□ -0.48
PHC1-214ENST00000544916 CCDC144BQ3MJ40 725 aa12.04□□□□□ -0.48
PHC1-214ENST00000544916 CCDC144CPQ8IYA2 1237 aa12.04□□□□□ -0.48
PHC1-214ENST00000544916 FSIP1Q8NA03 581 aa12.04□□□□□ -0.48
PHC1-214ENST00000544916 CCDC34Q96HJ3 373 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms