RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 F8W031 263 aaPredicted RBP22.96■■□□□ 1.27
BPTF-208ENST00000544778 HAND2P61296 217 aa22.96■■□□□ 1.27
BPTF-208ENST00000544778 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
BPTF-208ENST00000544778 MFSD6Q6ZSS7 791 aa22.96■■□□□ 1.27
BPTF-208ENST00000544778 GOLIM4O00461 696 aa22.96■■□□□ 1.27
BPTF-208ENST00000544778 SLU7O95391 586 aaKnown RBP22.95■■□□□ 1.26
BPTF-208ENST00000544778 FGD6Q6ZV73 1430 aa22.95■■□□□ 1.26
BPTF-208ENST00000544778 MICU3Q86XE3 530 aa22.95■■□□□ 1.26
BPTF-208ENST00000544778 ERBINQ96RT1 1412 aa22.95■■□□□ 1.26
BPTF-208ENST00000544778 SH2B1Q9NRF2 756 aaPredicted RBP22.95■■□□□ 1.26
BPTF-208ENST00000544778 CGNQ9P2M7 1197 aaKnown RBP22.95■■□□□ 1.26
BPTF-208ENST00000544778 ZSWIM4Q9H7M6 989 aa22.95■■□□□ 1.26
BPTF-208ENST00000544778 DAAM2Q86T65 1068 aa22.94■■□□□ 1.26
BPTF-208ENST00000544778 CFAP58Q5T655 872 aa22.94■■□□□ 1.26
BPTF-208ENST00000544778 ZBTB3Q9H5J0 574 aa22.94■■□□□ 1.26
BPTF-208ENST00000544778 CCDC172P0C7W6 258 aa22.94■■□□□ 1.26
BPTF-208ENST00000544778 MAP7D1Q3KQU3 841 aa22.94■■□□□ 1.26
BPTF-208ENST00000544778 CDC5LQ99459 802 aaKnown RBP22.94■■□□□ 1.26
BPTF-208ENST00000544778 TRIM47Q96LD4 638 aa22.94■■□□□ 1.26
BPTF-208ENST00000544778 ESPNB1AK53 854 aa22.93■■□□□ 1.26
BPTF-208ENST00000544778 TSPY3P0CV98 308 aa22.93■■□□□ 1.26
BPTF-208ENST00000544778 TSPY8P0CW00 308 aa22.93■■□□□ 1.26
BPTF-208ENST00000544778 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
BPTF-208ENST00000544778 TTC12Q9H892 705 aaPredicted RBP22.93■■□□□ 1.26
BPTF-208ENST00000544778 TTF1Q15361 905 aaPredicted RBP22.93■■□□□ 1.26
BPTF-208ENST00000544778 METAP2P50579 478 aaKnown RBP eCLIP22.93■■□□□ 1.26
BPTF-208ENST00000544778 CKAP4Q07065 602 aaKnown RBP22.93■■□□□ 1.26
BPTF-208ENST00000544778 CCDC6Q16204 474 aa22.93■■□□□ 1.26
BPTF-208ENST00000544778 FCHSD2O94868 740 aa22.93■■□□□ 1.26
BPTF-208ENST00000544778 TFIP11Q9UBB9 837 aaKnown RBP22.93■■□□□ 1.26
BPTF-208ENST00000544778 IARSP41252 1262 aaKnown RBP22.92■■□□□ 1.26
BPTF-208ENST00000544778 NCBP1Q09161 790 aaKnown RBP22.92■■□□□ 1.26
BPTF-208ENST00000544778 EXOC5O00471 708 aa22.92■■□□□ 1.26
BPTF-208ENST00000544778 USP16Q9Y5T5 823 aa22.92■■□□□ 1.26
BPTF-208ENST00000544778 TMPOP42166 694 aaKnown RBP22.92■■□□□ 1.26
BPTF-208ENST00000544778 TPD52P55327 224 aaPredicted RBP22.92■■□□□ 1.26
BPTF-208ENST00000544778 CIZ1Q9ULV3 898 aaPredicted RBP22.92■■□□□ 1.26
BPTF-208ENST00000544778 EEF2P13639 858 aaKnown RBP22.92■■□□□ 1.26
BPTF-208ENST00000544778 STX1AQ16623 288 aa22.92■■□□□ 1.26
BPTF-208ENST00000544778 F6X3S4 739 aa22.92■■□□□ 1.26
BPTF-208ENST00000544778 POTEB2H3BUK9 544 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 LDHCP07864 332 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 KRT13P13646 458 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 GTF2F1P35269 517 aaKnown RBP eCLIP22.91■■□□□ 1.26
BPTF-208ENST00000544778 AKNAD1Q5T1N1 836 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 STX8Q9UNK0 236 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 DDX12PQ92771 950 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 LRRC27Q9C0I9 530 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 SNRKQ9NRH2 765 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 PLVAPQ9BX97 442 aa22.91■■□□□ 1.26
BPTF-208ENST00000544778 GJB2P29033 226 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 KIF4AO95239 1232 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 WWC3Q9ULE0 1092 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 CALM1P0DP23 149 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 CALM2P0DP24 149 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 CALM3P0DP25 149 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 SNX16P57768 344 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 CCDC50Q8IVM0 306 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 ERMNQ8TAM6 284 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 PICALMQ13492 652 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 ATP2B3Q16720 1220 aa22.9■■□□□ 1.26
BPTF-208ENST00000544778 STAT6P42226 847 aa22.89■■□□□ 1.26
BPTF-208ENST00000544778 HEATR3Q7Z4Q2 680 aa22.89■■□□□ 1.26
BPTF-208ENST00000544778 TCHPQ9BT92 498 aa22.89■■□□□ 1.26
BPTF-208ENST00000544778 HYPKQ9NX55 129 aa22.89■■□□□ 1.26
BPTF-208ENST00000544778 LDHAL6AQ6ZMR3 332 aa22.89■■□□□ 1.26
BPTF-208ENST00000544778 BACH2Q9BYV9 841 aa22.89■■□□□ 1.26
BPTF-208ENST00000544778 MAP3K2Q9Y2U5 619 aa22.89■■□□□ 1.26
BPTF-208ENST00000544778 AFMP43652 599 aa22.89■■□□□ 1.25
BPTF-208ENST00000544778 SNW1Q13573 536 aaKnown RBP22.89■■□□□ 1.25
BPTF-208ENST00000544778 CRNKL1Q9BZJ0 848 aaKnown RBP22.89■■□□□ 1.25
BPTF-208ENST00000544778 GSTO1P78417 241 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 NAP1L3Q99457 506 aaPredicted RBP22.88■■□□□ 1.25
BPTF-208ENST00000544778 SELENOOQ9BVL4 669 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 ANAPC4Q9UJX5 808 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 AMOTQ4VCS5 1084 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 PPP1R42Q7Z4L9 355 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 SMC1BQ8NDV3 1235 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 NSD3Q9BZ95 1437 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 KANK3Q6NY19 840 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 USP37Q86T82 979 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 PYM1Q9BRP8 204 aaKnown RBP22.88■■□□□ 1.25
BPTF-208ENST00000544778 RNF216Q9NWF9 866 aaPredicted RBP22.88■■□□□ 1.25
BPTF-208ENST00000544778 RASAL2Q9UJF2 1139 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 LIMCH1Q9UPQ0 1083 aa22.88■■□□□ 1.25
BPTF-208ENST00000544778 PROCA1Q8NCQ7 364 aaPredicted RBP22.87■■□□□ 1.25
BPTF-208ENST00000544778 BIN2Q9UBW5 565 aaPredicted RBP22.87■■□□□ 1.25
BPTF-208ENST00000544778 ATP5J2-PTCD1G3V325 749 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 USP25Q9UHP3 1055 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 POGZQ7Z3K3 1410 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 KIF21BO75037 1637 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 ARID5AQ03989 594 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 ZSCAN30Q86W11 494 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 GSDMDP57764 484 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 IFIT1BQ5T764 474 aaKnown RBP22.87■■□□□ 1.25
BPTF-208ENST00000544778 IMPG2Q9BZV3 1241 aa22.87■■□□□ 1.25
BPTF-208ENST00000544778 GDPD2Q9HCC8 539 aa22.86■■□□□ 1.25
BPTF-208ENST00000544778 HDAC9Q9UKV0 1011 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms