RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 DDX46Q7L014 1031 aaKnown RBP19.02■□□□□ 0.64
SNRNP70-203ENST00000544278 IFNL2Q8IZJ0 200 aa19.02■□□□□ 0.64
SNRNP70-203ENST00000544278 NEUROD6Q96NK8 337 aa19.02■□□□□ 0.64
SNRNP70-203ENST00000544278 CWC22Q9HCG8 908 aaKnown RBP19.02■□□□□ 0.64
SNRNP70-203ENST00000544278 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
SNRNP70-203ENST00000544278 HOXB7P09629 217 aa19.01■□□□□ 0.63
SNRNP70-203ENST00000544278 RBM8AQ9Y5S9 174 aaKnown RBP19■□□□□ 0.63
SNRNP70-203ENST00000544278 DBNDD2Q9BQY9 259 aa19■□□□□ 0.63
SNRNP70-203ENST00000544278 ALDH1L1O75891 902 aa19■□□□□ 0.63
SNRNP70-203ENST00000544278 LMBR1LQ6UX01 489 aa19■□□□□ 0.63
SNRNP70-203ENST00000544278 RRP9O43818 475 aaKnown RBP18.99■□□□□ 0.63
SNRNP70-203ENST00000544278 BRD1O95696 1058 aa18.99■□□□□ 0.63
SNRNP70-203ENST00000544278 LARP1Q6PKG0 1096 aaKnown RBP18.99■□□□□ 0.63
SNRNP70-203ENST00000544278 TIMM10P62072 90 aa18.99■□□□□ 0.63
SNRNP70-203ENST00000544278 HSP90AB4PQ58FF6 505 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 USP48Q86UV5 1035 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 KCNA4P22459 653 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 PDRG1Q9NUG6 133 aa18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 DBNLQ9UJU6 430 aaKnown RBP18.98■□□□□ 0.63
SNRNP70-203ENST00000544278 A0A0G2JLW4 131 aa18.97■□□□□ 0.63
SNRNP70-203ENST00000544278 CUL4AQ13619 759 aa18.97■□□□□ 0.63
SNRNP70-203ENST00000544278 SNRPA1P09661 255 aaKnown RBP18.97■□□□□ 0.63
SNRNP70-203ENST00000544278 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
SNRNP70-203ENST00000544278 SYNE4Q8N205 404 aa18.97■□□□□ 0.63
SNRNP70-203ENST00000544278 METTL22Q9BUU2 404 aaPredicted RBP18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 SMC3Q9UQE7 1217 aa18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 TCHHQ07283 1943 aa18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 SYT1P21579 422 aa18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 GPATCH3Q96I76 525 aa18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 SNRKQ9NRH2 765 aa18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 NAP1L2Q9ULW6 460 aaPredicted RBP18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 ESPNB1AK53 854 aa18.96■□□□□ 0.63
SNRNP70-203ENST00000544278 GJB2P29033 226 aa18.95■□□□□ 0.62
SNRNP70-203ENST00000544278 ME3Q16798 604 aa18.95■□□□□ 0.62
SNRNP70-203ENST00000544278 CREB3L3Q68CJ9 461 aa18.95■□□□□ 0.62
SNRNP70-203ENST00000544278 TTC14Q96N46 770 aa18.95■□□□□ 0.62
SNRNP70-203ENST00000544278 FMNL2Q96PY5 1086 aa18.95■□□□□ 0.62
SNRNP70-203ENST00000544278 ANAPC15P60006 121 aa18.95■□□□□ 0.62
SNRNP70-203ENST00000544278 RBM10P98175 930 aaKnown RBP18.95■□□□□ 0.62
SNRNP70-203ENST00000544278 MED1Q15648 1581 aaPredicted RBP18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 PTPN12Q05209 780 aaKnown RBP18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 ST3GAL1Q11201 340 aa18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 MTX1Q13505 466 aa18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 PUS3Q9BZE2 481 aaKnown RBP18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 CCDC171Q6TFL3 1326 aa18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 DNM1Q05193 864 aaKnown RBP18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 TPCN1Q9ULQ1 816 aa18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 LIMCH1Q9UPQ0 1083 aa18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 PXDNLA1KZ92 1463 aa18.94■□□□□ 0.62
SNRNP70-203ENST00000544278 LRRC24Q50LG9 513 aa18.93■□□□□ 0.62
SNRNP70-203ENST00000544278 CHST3Q7LGC8 479 aa18.93■□□□□ 0.62
SNRNP70-203ENST00000544278 HOMEZQ8IX15 550 aa18.93■□□□□ 0.62
SNRNP70-203ENST00000544278 EVI5LQ96CN4 794 aa18.93■□□□□ 0.62
SNRNP70-203ENST00000544278 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
SNRNP70-203ENST00000544278 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
SNRNP70-203ENST00000544278 DCAF5Q96JK2 942 aa18.93■□□□□ 0.62
SNRNP70-203ENST00000544278 TTC41PQ6P2S7 1318 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 FAM177BA6PVY3 158 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 CLCN1P35523 988 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 CLEC17AQ6ZS10 378 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 BRINP3Q76B58 766 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 CYP46A1Q9Y6A2 500 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 RPAP1Q9BWH6 1393 aaPredicted RBP18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 GPTP24298 496 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 AOX1Q06278 1338 aa18.92■□□□□ 0.62
SNRNP70-203ENST00000544278 CACNA1FO60840 1977 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 SLC27A2O14975 620 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 MCM2P49736 904 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 TFIP11Q9UBB9 837 aaKnown RBP18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 KDM3BQ7LBC6 1761 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 GOLIM4O00461 696 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 STX6O43752 255 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 EVA1CP58658 441 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 ERC1Q8IUD2 1116 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 ZNF335Q9H4Z2 1342 aaPredicted RBP18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 MST1RQ04912 1400 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 RAB11FIP4Q86YS3 637 aa18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 ANP32BQ92688 251 aaKnown RBP18.91■□□□□ 0.62
SNRNP70-203ENST00000544278 TNNI3KQ59H18 835 aa18.9■□□□□ 0.62
SNRNP70-203ENST00000544278 FPGT-TNNI3KV9GXZ4 949 aa18.9■□□□□ 0.62
SNRNP70-203ENST00000544278 ZKSCAN1P17029 563 aaPredicted RBP18.9■□□□□ 0.62
SNRNP70-203ENST00000544278 CADPS2Q86UW7 1296 aa18.9■□□□□ 0.62
SNRNP70-203ENST00000544278 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
SNRNP70-203ENST00000544278 KDM4AO75164 1064 aa18.89■□□□□ 0.62
SNRNP70-203ENST00000544278 CEBPZQ03701 1054 aaKnown RBP18.89■□□□□ 0.61
SNRNP70-203ENST00000544278 NECTIN1Q15223 517 aa18.89■□□□□ 0.61
SNRNP70-203ENST00000544278 JAK2O60674 1132 aa18.89■□□□□ 0.61
SNRNP70-203ENST00000544278 FAM89AQ96GI7 184 aa18.89■□□□□ 0.61
SNRNP70-203ENST00000544278 GOLGB1Q14789 3259 aaKnown RBP18.88■□□□□ 0.61
SNRNP70-203ENST00000544278 PI16Q6UXB8 463 aa18.88■□□□□ 0.61
SNRNP70-203ENST00000544278 COL15A1P39059 1388 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms