RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 JAKMIP3Q5VZ66 844 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 BICD2Q8TD16 824 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 CDK19Q9BWU1 502 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 PSD3Q9NYI0 1048 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 NRBP1Q9UHY1 535 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 PTPRMP28827 1452 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 TTC41PQ6P2S7 1318 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 MINK1Q8N4C8 1332 aaPredicted RBP5.86□□□□□ -1.47
LMO3-229ENST00000543721 MAP2P11137 1827 aaKnown RBP5.86□□□□□ -1.47
LMO3-229ENST00000543721 PNMA6AP0CW24 399 aaPredicted RBP5.86□□□□□ -1.47
LMO3-229ENST00000543721 LIG1P18858 919 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 SLC4A10Q6U841 1118 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 CEP57L1Q8IYX8 460 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 MNS1Q8NEH6 495 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 GPATCH3Q96I76 525 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 OSBPL5Q9H0X9 879 aaPredicted RBP5.86□□□□□ -1.47
LMO3-229ENST00000543721 HDAC5Q9UQL6 1122 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.86□□□□□ -1.47
LMO3-229ENST00000543721 GLRX3O76003 335 aaKnown RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 IVLP07476 585 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CAPN2P17655 700 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 TUBB4BP68371 445 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CACNB1Q02641 598 aaPredicted RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 COG3Q96JB2 828 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 BRMS1Q9HCU9 246 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CABP1Q9NZU7 370 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 PHLPP2Q6ZVD8 1323 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CHD2O14647 1828 aaKnown RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 PXDNLA1KZ92 1463 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 RAD51AP2Q09MP3 1159 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 SAFB2Q14151 953 aaKnown RBP eCLIP5.85□□□□□ -1.47
LMO3-229ENST00000543721 NAA30Q147X3 362 aaPredicted RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 CAMK4Q16566 473 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CCDC158Q5M9N0 1113 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CCDC30Q5VVM6 783 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CKAP2LQ8IYA6 745 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 GOLGA5Q8TBA6 731 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 LEO1Q8WVC0 666 aaPredicted RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 JAKMIP1Q96N16 626 aaKnown RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 PRAM1Q96QH2 718 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 DNAJC25Q9H1X3 360 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 FHOD1Q9Y613 1164 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 MAP3K5Q99683 1374 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 CLCN6P51797 869 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 IQCB1Q15051 598 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 ZRSR1Q15695 479 aaKnown RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 CCDC73Q6ZRK6 1079 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 SSH3Q8TE77 659 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 EXOC4Q96A65 974 aa5.85□□□□□ -1.47
LMO3-229ENST00000543721 USP42Q9H9J4 1324 aaKnown RBP5.85□□□□□ -1.47
LMO3-229ENST00000543721 GOLGA6L9A6NEM1 432 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 EFCAB8A8MWE9 144 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 ZRANB2O95218 330 aaKnown RBP eCLIP5.84□□□□□ -1.47
LMO3-229ENST00000543721 CCZ1BP86790 482 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 CCZ1P86791 482 aaPredicted RBP5.84□□□□□ -1.47
LMO3-229ENST00000543721 KRT24Q2M2I5 525 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 CCDC144BQ3MJ40 725 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 ARHGAP29Q52LW3 1261 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 CCDC93Q567U6 631 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 FCHSD1Q86WN1 690 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 CCDC144CPQ8IYA2 1237 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 STK26Q9P289 416 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 KIDINS220Q9ULH0 1771 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 ITSN1Q15811 1721 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 UBTFL1P0CB47 393 aaPredicted RBP5.84□□□□□ -1.47
LMO3-229ENST00000543721 IQUBQ8NA54 791 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 GEMIN8Q9NWZ8 242 aaKnown RBP5.84□□□□□ -1.47
LMO3-229ENST00000543721 DLC1Q96QB1 1528 aa5.84□□□□□ -1.47
LMO3-229ENST00000543721 CACNA1FO60840 1977 aa5.84□□□□□ -1.48
LMO3-229ENST00000543721 KINO60870 393 aaKnown RBP5.84□□□□□ -1.48
LMO3-229ENST00000543721 SFPQP23246 707 aaKnown RBP eCLIP5.84□□□□□ -1.48
LMO3-229ENST00000543721 CASQ1P31415 396 aa5.84□□□□□ -1.48
LMO3-229ENST00000543721 ETF1P62495 437 aaKnown RBP5.84□□□□□ -1.48
LMO3-229ENST00000543721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.84□□□□□ -1.48
LMO3-229ENST00000543721 SPOCK2Q92563 424 aa5.84□□□□□ -1.48
LMO3-229ENST00000543721 ZNF446Q9NWS9 450 aa5.84□□□□□ -1.48
LMO3-229ENST00000543721 BABAM1Q9NWV8 329 aa5.84□□□□□ -1.48
LMO3-229ENST00000543721 HMG20BQ9P0W2 317 aa5.84□□□□□ -1.48
LMO3-229ENST00000543721 DNAI1Q9UI46 699 aa5.84□□□□□ -1.48
LMO3-229ENST00000543721 FAM83GA6ND36 823 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 ZSCAN12O43309 604 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 PLA2G4AP47712 749 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 KRT32Q14532 448 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 ERCC6LQ2NKX8 1250 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 LRRFIP1Q32MZ4 808 aaKnown RBP5.83□□□□□ -1.48
LMO3-229ENST00000543721 LEKR1Q6ZMV7 388 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 RASEFQ8IZ41 740 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 GPR161Q8N6U8 529 aaKnown RBP5.83□□□□□ -1.48
LMO3-229ENST00000543721 RHPN1Q8TCX5 695 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 ZNF396Q96N95 335 aaPredicted RBP5.83□□□□□ -1.48
LMO3-229ENST00000543721 ORC3Q9UBD5 711 aaPredicted RBP5.83□□□□□ -1.48
LMO3-229ENST00000543721 LRRFIP2Q9Y608 721 aaKnown RBP5.83□□□□□ -1.48
LMO3-229ENST00000543721 EMILIN1Q9Y6C2 1016 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 MLH3Q9UHC1 1453 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 POTEB2H3BUK9 544 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 ZSCAN26Q16670 478 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 ME3Q16798 604 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 BLOC1S2Q6QNY1 142 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 KRBA2Q6ZNG9 492 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 HOMER1Q86YM7 354 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms