RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 IGHA1P01876 353 aa9.86□□□□□ -0.83
XRCC4-206ENST00000542685 KLK14Q9P0G3 267 aa9.86□□□□□ -0.83
XRCC4-206ENST00000542685 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
XRCC4-206ENST00000542685 GTF3C3Q9Y5Q9 886 aa9.86□□□□□ -0.83
XRCC4-206ENST00000542685 KRBA1A5PL33 1030 aa9.85□□□□□ -0.83
XRCC4-206ENST00000542685 TGFBR3LH3BV60 316 aa9.85□□□□□ -0.83
XRCC4-206ENST00000542685 FOXO3O43524 673 aa9.85□□□□□ -0.83
XRCC4-206ENST00000542685 BHMTQ93088 406 aa9.85□□□□□ -0.83
XRCC4-206ENST00000542685 ADARB2-AS1A8MUL3 147 aa9.84□□□□□ -0.83
XRCC4-206ENST00000542685 ITGB2P05107 769 aa9.84□□□□□ -0.83
XRCC4-206ENST00000542685 DGKZQ13574 1117 aa9.84□□□□□ -0.83
XRCC4-206ENST00000542685 PRIMPOLQ96LW4 560 aa9.84□□□□□ -0.83
XRCC4-206ENST00000542685 MDFIQ99750 246 aa9.84□□□□□ -0.83
XRCC4-206ENST00000542685 QTRT2Q9H974 415 aaKnown RBP9.84□□□□□ -0.83
XRCC4-206ENST00000542685 ZMIZ1Q9ULJ6 1067 aa9.84□□□□□ -0.83
XRCC4-206ENST00000542685 MSTNO14793 375 aa9.83□□□□□ -0.84
XRCC4-206ENST00000542685 IER5Q5VY09 327 aa9.83□□□□□ -0.84
XRCC4-206ENST00000542685 TNFRSF25Q93038 417 aa9.83□□□□□ -0.84
XRCC4-206ENST00000542685 IGFLR1Q9H665 355 aa9.83□□□□□ -0.84
XRCC4-206ENST00000542685 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
XRCC4-206ENST00000542685 PRMT3O60678 531 aa9.82□□□□□ -0.84
XRCC4-206ENST00000542685 ADH7P40394 386 aa9.82□□□□□ -0.84
XRCC4-206ENST00000542685 TBC1D8BQ0IIM8 1120 aa9.82□□□□□ -0.84
XRCC4-206ENST00000542685 ALYREFQ86V81 257 aaKnown RBP9.82□□□□□ -0.84
XRCC4-206ENST00000542685 STK32AQ8WU08 396 aa9.82□□□□□ -0.84
XRCC4-206ENST00000542685 SPOCK3Q9BQ16 436 aa9.82□□□□□ -0.84
XRCC4-206ENST00000542685 NOP53Q9NZM5 478 aaKnown RBP9.82□□□□□ -0.84
XRCC4-206ENST00000542685 DMGDHQ9UI17 866 aaKnown RBP9.82□□□□□ -0.84
XRCC4-206ENST00000542685 ACIN1Q9UKV3 1341 aaKnown RBP9.82□□□□□ -0.84
XRCC4-206ENST00000542685 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
XRCC4-206ENST00000542685 TRIM11Q96F44 468 aa9.81□□□□□ -0.84
XRCC4-206ENST00000542685 CCDC97Q96F63 343 aaPredicted RBP9.81□□□□□ -0.84
XRCC4-206ENST00000542685 M0R082 166 aa9.8□□□□□ -0.84
XRCC4-206ENST00000542685 IDH3AP50213 366 aa9.8□□□□□ -0.84
XRCC4-206ENST00000542685 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
XRCC4-206ENST00000542685 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
XRCC4-206ENST00000542685 ELOAQ14241 798 aaKnown RBP9.8□□□□□ -0.84
XRCC4-206ENST00000542685 SWI5Q1ZZU3 235 aa9.8□□□□□ -0.84
XRCC4-206ENST00000542685 ZNF417Q8TAU3 575 aa9.8□□□□□ -0.84
XRCC4-206ENST00000542685 PNMA5Q96PV4 448 aa9.8□□□□□ -0.84
XRCC4-206ENST00000542685 ZNF587Q96SQ5 575 aaPredicted RBP9.8□□□□□ -0.84
XRCC4-206ENST00000542685 PLVAPQ9BX97 442 aa9.8□□□□□ -0.84
XRCC4-206ENST00000542685 UBE2OQ9C0C9 1292 aaKnown RBP9.8□□□□□ -0.84
XRCC4-206ENST00000542685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.8□□□□□ -0.84
XRCC4-206ENST00000542685 STARD13Q9Y3M8 1113 aa9.8□□□□□ -0.84
XRCC4-206ENST00000542685 C11orf91Q3C1V1 193 aa9.79□□□□□ -0.84
XRCC4-206ENST00000542685 GSX2Q9BZM3 304 aa9.79□□□□□ -0.84
XRCC4-206ENST00000542685 ALBP02768 609 aa9.78□□□□□ -0.84
XRCC4-206ENST00000542685 EPB42P16452 691 aa9.78□□□□□ -0.84
XRCC4-206ENST00000542685 INPP5BP32019 993 aa9.78□□□□□ -0.84
XRCC4-206ENST00000542685 CCINQ13939 588 aa9.78□□□□□ -0.84
XRCC4-206ENST00000542685 C8orf86Q6ZUL3 223 aa9.78□□□□□ -0.84
XRCC4-206ENST00000542685 MYO19Q96H55 970 aa9.78□□□□□ -0.84
XRCC4-206ENST00000542685 LRFN2Q9ULH4 789 aa9.78□□□□□ -0.84
XRCC4-206ENST00000542685 MICAL2O94851 1124 aa9.77□□□□□ -0.85
XRCC4-206ENST00000542685 ATG7O95352 703 aa9.77□□□□□ -0.85
XRCC4-206ENST00000542685 NFKB1P19838 968 aa9.77□□□□□ -0.85
XRCC4-206ENST00000542685 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.85
XRCC4-206ENST00000542685 FAM69CQ0P6D2 419 aa9.77□□□□□ -0.85
XRCC4-206ENST00000542685 MICALL1Q8N3F8 863 aa9.77□□□□□ -0.85
XRCC4-206ENST00000542685 IFT43Q96FT9 208 aa9.77□□□□□ -0.85
XRCC4-206ENST00000542685 SERPINA10Q9UK55 444 aa9.77□□□□□ -0.85
XRCC4-206ENST00000542685 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.77□□□□□ -0.85
XRCC4-206ENST00000542685 PROCP04070 461 aa9.76□□□□□ -0.85
XRCC4-206ENST00000542685 ARSDP51689 593 aa9.76□□□□□ -0.85
XRCC4-206ENST00000542685 SUZ12Q15022 739 aaKnown RBP9.76□□□□□ -0.85
XRCC4-206ENST00000542685 OCLNQ16625 522 aa9.76□□□□□ -0.85
XRCC4-206ENST00000542685 TMEM164Q5U3C3 297 aa9.76□□□□□ -0.85
XRCC4-206ENST00000542685 COX20Q5RI15 118 aa9.75□□□□□ -0.85
XRCC4-206ENST00000542685 KRT25Q7Z3Z0 450 aa9.75□□□□□ -0.85
XRCC4-206ENST00000542685 PBXIP1Q96AQ6 731 aa9.75□□□□□ -0.85
XRCC4-206ENST00000542685 MKNK1Q9BUB5 465 aa9.75□□□□□ -0.85
XRCC4-206ENST00000542685 EFCC1Q9HA90 598 aa9.75□□□□□ -0.85
XRCC4-206ENST00000542685 SLC6A14Q9UN76 642 aa9.75□□□□□ -0.85
XRCC4-206ENST00000542685 C1QTNF9BB2RNN3 333 aa9.74□□□□□ -0.85
XRCC4-206ENST00000542685 DNAJB12Q9NXW2 375 aaKnown RBP9.74□□□□□ -0.85
XRCC4-206ENST00000542685 USP20Q9Y2K6 914 aa9.74□□□□□ -0.85
XRCC4-206ENST00000542685 CD163Q86VB7 1156 aa9.73□□□□□ -0.85
XRCC4-206ENST00000542685 TREML1Q86YW5 311 aa9.73□□□□□ -0.85
XRCC4-206ENST00000542685 SAP130Q9H0E3 1048 aa9.73□□□□□ -0.85
XRCC4-206ENST00000542685 SPDYE3A6NKU9 549 aa9.72□□□□□ -0.85
XRCC4-206ENST00000542685 OPLAHO14841 1288 aa9.72□□□□□ -0.85
XRCC4-206ENST00000542685 TARSP26639 723 aaKnown RBP9.72□□□□□ -0.85
XRCC4-206ENST00000542685 CHRNA4P43681 627 aa9.72□□□□□ -0.85
XRCC4-206ENST00000542685 COL9A3Q14050 684 aaPredicted RBP9.72□□□□□ -0.85
XRCC4-206ENST00000542685 C20orf204Q6ZNR8 217 aa9.72□□□□□ -0.85
XRCC4-206ENST00000542685 CAPN12Q6ZSI9 719 aa9.72□□□□□ -0.85
XRCC4-206ENST00000542685 NUDT8Q8WV74 236 aa9.72□□□□□ -0.85
XRCC4-206ENST00000542685 PRDM6Q9NQX0 595 aa9.72□□□□□ -0.85
XRCC4-206ENST00000542685 RTCBQ9Y3I0 505 aaKnown RBP9.72□□□□□ -0.85
XRCC4-206ENST00000542685 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
XRCC4-206ENST00000542685 LILRB5O75023 590 aa9.71□□□□□ -0.86
XRCC4-206ENST00000542685 SASH3O75995 380 aa9.71□□□□□ -0.86
XRCC4-206ENST00000542685 SPATA31C1P0DKV0 1188 aa9.71□□□□□ -0.86
XRCC4-206ENST00000542685 NAA30Q147X3 362 aaPredicted RBP9.71□□□□□ -0.86
XRCC4-206ENST00000542685 PRRT3Q5FWE3 981 aa9.71□□□□□ -0.86
XRCC4-206ENST00000542685 C16orf46Q6P387 395 aa9.71□□□□□ -0.86
XRCC4-206ENST00000542685 RGL4Q8IZJ4 473 aa9.71□□□□□ -0.86
XRCC4-206ENST00000542685 JPH1Q9HDC5 661 aaPredicted RBP9.71□□□□□ -0.86
XRCC4-206ENST00000542685 CXXC1Q9P0U4 656 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms