RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 TCERG1O14776 1098 aaKnown RBP15.59■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 DDX58O95786 925 aaKnown RBP15.59■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 SLC4A9Q96Q91 983 aa15.59■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 CHMP4BQ9H444 224 aaKnown RBP15.59■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 RASSF10A6NK89 507 aa15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 TMEM88BA6NKF7 163 aa15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CYP19A1P11511 503 aaPredicted RBP15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 FKBP5Q13451 457 aaPredicted RBP15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 FKBP8Q14318 412 aa15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 LRP10Q7Z4F1 713 aa15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 NECTIN2Q92692 538 aa15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 MCOLN1Q9GZU1 580 aa15.58■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CASP8AP2Q9UKL3 1982 aa15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CHRNA5P30532 468 aa15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ITPK1Q13572 414 aa15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 MVPQ14764 893 aaKnown RBP15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CNTNAP4Q9C0A0 1308 aa15.57■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 GYS1P13807 737 aa15.56■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CCT4P50991 539 aaKnown RBP15.56■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 C20orf194Q5TEA3 1177 aa15.56■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 G2E3Q7L622 706 aa15.56■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ARFGEF2Q9Y6D5 1785 aa15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 WDR33Q9C0J8 1336 aaKnown RBP15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 IL6STP40189 918 aaPredicted RBP15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 PROSER3Q2NL68 480 aa15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 INTS3Q68E01 1043 aaKnown RBP15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 KSR2Q6VAB6 950 aa15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 PANK1Q8TE04 598 aa15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 PHAXQ9H814 394 aaKnown RBP15.55■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 NBPF26B4DH59 902 aa15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 RLBP1P12271 317 aa15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 RC3H1Q5TC82 1133 aaKnown RBP15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 NBPF10Q6P3W6 841 aaKnown RBP15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 NBPF15Q8N660 670 aa15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CLUAP1Q96AJ1 413 aa15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CRBNQ96SW2 442 aa15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 MYH14Q7Z406 1995 aaKnown RBP15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 SCN4AP35499 1836 aa15.54■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 RGL2O15211 777 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ITGBL1O95965 494 aaPredicted RBP15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 A1BGP04217 495 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 MYL6BP14649 208 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 IRX6P78412 446 aaPredicted RBP15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 TRAPPC3LQ5T215 181 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 TMEM57Q8N5G2 664 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 DNAAF4Q8WXU2 420 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ADAMTSL1Q8N6G6 1762 aa15.53■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ANXA1P04083 346 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 CRKLP46109 303 aaKnown RBP15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 DEFB115Q30KQ5 88 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 COPS6Q7L5N1 327 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ITPRIPQ8IWB1 547 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 XAGE3Q8WTP9 111 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 ZBTB1Q9Y2K1 713 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 COG6Q9Y2V7 657 aa15.52■□□□□ 0.08
CACNA1C-IT3-201ENST00000542680 PI4KAP2A4QPH2 592 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 NFKBIEO00221 500 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 ANKRD13DQ6ZTN6 518 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 NPM2Q86SE8 214 aaKnown RBP15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 LDHDQ86WU2 507 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 PI4KAP1Q8N8J0 262 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 EXOC6Q8TAG9 804 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 ARHGEF1Q92888 912 aaKnown RBP15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 TNNQ9UQP3 1299 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 RTCBQ9Y3I0 505 aaKnown RBP15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 CUL9Q8IWT3 2517 aa15.51■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 FER1L6Q2WGJ9 1857 aa15.5■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 BCORQ6W2J9 1755 aa15.5■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 ALDH1L1O75891 902 aa15.5■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 INTS5Q6P9B9 1019 aaKnown RBP15.5■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 KIF6Q6ZMV9 814 aa15.5■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 PPP4R2Q9NY27 417 aa15.5■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 ANKRD36CQ5JPF3 1778 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 A0A087WZG4 1122 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 DDR1Q08345 913 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 NEXNQ0ZGT2 675 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 LINS1Q8NG48 757 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 SRCIN1Q9C0H9 1055 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 MAP3K2Q9Y2U5 619 aa15.49■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 SCN7AQ01118 1682 aa15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 AFDNP55196 1824 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 ERVV-1B6SEH8 477 aa15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 F6X3S4 739 aa15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 AIMP1Q12904 312 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 HSP90AB3PQ58FF7 597 aa15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 BEND3Q5T5X7 828 aa15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 SLC4A10Q6U841 1118 aa15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 METTL22Q9BUU2 404 aaPredicted RBP15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 TSKSQ9UJT2 592 aa15.48■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 COL15A1P39059 1388 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms