RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PPP4R3BQ5MIZ7 849 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 CDC37L1Q7L3B6 337 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 TTC5Q8N0Z6 440 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 ZNF710Q8N1W2 664 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 EDC3Q96F86 508 aaKnown RBP18.25■□□□□ 0.51
CNOT9-208ENST00000542068 GPATCH3Q96I76 525 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 DIP2AQ14689 1571 aa18.24■□□□□ 0.51
CNOT9-208ENST00000542068 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
CNOT9-208ENST00000542068 UBR1Q8IWV7 1749 aa18.24■□□□□ 0.51
CNOT9-208ENST00000542068 UVSSAQ2YD98 709 aa18.24■□□□□ 0.51
CNOT9-208ENST00000542068 KIF3AQ9Y496 699 aa18.24■□□□□ 0.51
CNOT9-208ENST00000542068 BICC1Q9H694 974 aaKnown RBP18.24■□□□□ 0.51
CNOT9-208ENST00000542068 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
CNOT9-208ENST00000542068 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
CNOT9-208ENST00000542068 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
CNOT9-208ENST00000542068 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
CNOT9-208ENST00000542068 KCNF1Q9H3M0 494 aa18.23■□□□□ 0.51
CNOT9-208ENST00000542068 TPCN1Q9ULQ1 816 aa18.23■□□□□ 0.51
CNOT9-208ENST00000542068 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
CNOT9-208ENST00000542068 GLRX3O76003 335 aaKnown RBP18.23■□□□□ 0.51
CNOT9-208ENST00000542068 LRMPQ12912 555 aa18.23■□□□□ 0.51
CNOT9-208ENST00000542068 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
CNOT9-208ENST00000542068 DDX11Q96FC9 970 aa18.23■□□□□ 0.51
CNOT9-208ENST00000542068 DNAJC2Q99543 621 aaKnown RBP18.23■□□□□ 0.51
CNOT9-208ENST00000542068 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
CNOT9-208ENST00000542068 ATF3P18847 181 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 CCDC192P0DO97 292 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 FGD1P98174 961 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 RUFY2Q8WXA3 655 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 SUCLG2Q96I99 432 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
CNOT9-208ENST00000542068 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
CNOT9-208ENST00000542068 AMOTQ4VCS5 1084 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 NRBP1Q9UHY1 535 aa18.22■□□□□ 0.51
CNOT9-208ENST00000542068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
CNOT9-208ENST00000542068 RIOK3O14730 519 aaKnown RBP18.21■□□□□ 0.51
CNOT9-208ENST00000542068 LETM1O95202 739 aaPredicted RBP18.21■□□□□ 0.51
CNOT9-208ENST00000542068 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
CNOT9-208ENST00000542068 C16orf45Q96MC5 204 aaPredicted RBP18.21■□□□□ 0.51
CNOT9-208ENST00000542068 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
CNOT9-208ENST00000542068 DACT1Q9NYF0 836 aa18.21■□□□□ 0.51
CNOT9-208ENST00000542068 ST3GAL1Q11201 340 aa18.21■□□□□ 0.51
CNOT9-208ENST00000542068 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.51
CNOT9-208ENST00000542068 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
CNOT9-208ENST00000542068 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
CNOT9-208ENST00000542068 POLA2Q14181 598 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 CCDC94Q9BW85 323 aaPredicted RBP18.2■□□□□ 0.5
CNOT9-208ENST00000542068 TRIM5Q9C035 493 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 NUP62CLQ9H1M0 184 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 GRM8O00222 908 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 CCDC186Q7Z3E2 898 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 BICD2Q8TD16 824 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 NEUROD6Q96NK8 337 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 A0A087WWV3 80 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 HMGN5P82970 282 aaKnown RBP18.2■□□□□ 0.5
CNOT9-208ENST00000542068 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 ARHGEF25Q86VW2 580 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 LRRC2Q9BYS8 371 aa18.2■□□□□ 0.5
CNOT9-208ENST00000542068 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
CNOT9-208ENST00000542068 KRT85P78386 507 aa18.19■□□□□ 0.5
CNOT9-208ENST00000542068 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
CNOT9-208ENST00000542068 TMEM87AQ8NBN3 555 aa18.19■□□□□ 0.5
CNOT9-208ENST00000542068 TNMDQ9H2S6 317 aa18.19■□□□□ 0.5
CNOT9-208ENST00000542068 MAP3K11Q16584 847 aa18.19■□□□□ 0.5
CNOT9-208ENST00000542068 ATP2B3Q16720 1220 aa18.19■□□□□ 0.5
CNOT9-208ENST00000542068 ANO6Q4KMQ2 910 aa18.19■□□□□ 0.5
CNOT9-208ENST00000542068 MTERF4Q7Z6M4 381 aaKnown RBP18.19■□□□□ 0.5
CNOT9-208ENST00000542068 CHGBP05060 677 aa18.18■□□□□ 0.5
CNOT9-208ENST00000542068 PRIMPOLQ96LW4 560 aa18.18■□□□□ 0.5
CNOT9-208ENST00000542068 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
CNOT9-208ENST00000542068 AKAP12Q02952 1782 aa18.18■□□□□ 0.5
CNOT9-208ENST00000542068 TYRO3Q06418 890 aa18.18■□□□□ 0.5
CNOT9-208ENST00000542068 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
CNOT9-208ENST00000542068 ZNF496Q96IT1 587 aaPredicted RBP18.18■□□□□ 0.5
CNOT9-208ENST00000542068 SPATA32Q96LK8 384 aa18.18■□□□□ 0.5
CNOT9-208ENST00000542068 AOX1Q06278 1338 aa18.18■□□□□ 0.5
CNOT9-208ENST00000542068 HSP90B1P14625 803 aaKnown RBP18.17■□□□□ 0.5
CNOT9-208ENST00000542068 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
CNOT9-208ENST00000542068 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 PRDM4Q9UKN5 801 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.55e-7■■□□□ 12.1
CNOT9-208ENST00000542068 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 KAT6BQ8WYB5 2073 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 JAK2O60674 1132 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 PDCL2Q8N4E4 241 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 FUCA2Q9BTY2 467 aa18.17■□□□□ 0.5
CNOT9-208ENST00000542068 ADCY9O60503 1353 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 CCDC171Q6TFL3 1326 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 NAA30Q147X3 362 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms