RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 RIC1Q4ADV7 1423 aa15.48■□□□□ 0.07
CLSTN3-211ENST00000541667 WDR43Q15061 677 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLSTN3-211ENST00000541667 CCDC184Q52MB2 194 aa15.47■□□□□ 0.07
CLSTN3-211ENST00000541667 SMC1BQ8NDV3 1235 aa15.47■□□□□ 0.07
CLSTN3-211ENST00000541667 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
CLSTN3-211ENST00000541667 ZNF277Q9NRM2 450 aaPredicted RBP15.47■□□□□ 0.07
CLSTN3-211ENST00000541667 RTKN2Q8IZC4 609 aa15.46■□□□□ 0.07
CLSTN3-211ENST00000541667 SYNE4Q8N205 404 aa15.46■□□□□ 0.07
CLSTN3-211ENST00000541667 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
CLSTN3-211ENST00000541667 APAF1O14727 1248 aa15.45■□□□□ 0.06
CLSTN3-211ENST00000541667 TCIRG1Q13488 830 aa15.45■□□□□ 0.06
CLSTN3-211ENST00000541667 PARP10Q53GL7 1025 aa15.45■□□□□ 0.06
CLSTN3-211ENST00000541667 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
CLSTN3-211ENST00000541667 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-211ENST00000541667 FZD9O00144 591 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 AIMP1Q12904 312 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 PPP1R42Q7Z4L9 355 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 L3MBTL3Q96JM7 780 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 PSMD1Q99460 953 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 UTP14AQ9BVJ6 771 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 CHPF2Q9P2E5 772 aa15.44■□□□□ 0.06
CLSTN3-211ENST00000541667 HOXB7P09629 217 aa15.43■□□□□ 0.06
CLSTN3-211ENST00000541667 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
CLSTN3-211ENST00000541667 COL4A5P29400 1685 aa15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 IARSP41252 1262 aaKnown RBP15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 CC2D2BQ6DHV5 1058 aa15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 JMYQ8N9B5 988 aa15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 KLRG1Q96E93 195 aa15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 NLRP3Q96P20 1036 aa15.42■□□□□ 0.06
CLSTN3-211ENST00000541667 RPGRQ92834 1020 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-211ENST00000541667 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
CLSTN3-211ENST00000541667 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 HSP90AB3PQ58FF7 597 aa15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 ANKRD13DQ6ZTN6 518 aa15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 TAF1DQ9H5J8 278 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 PCNTO95613 3336 aa15.4■□□□□ 0.06
CLSTN3-211ENST00000541667 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
CLSTN3-211ENST00000541667 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
CLSTN3-211ENST00000541667 ATP6V0A2Q9Y487 856 aa15.39■□□□□ 0.05
CLSTN3-211ENST00000541667 ABCC4O15439 1325 aa15.39■□□□□ 0.05
CLSTN3-211ENST00000541667 RNF123Q5XPI4 1314 aa15.39■□□□□ 0.05
CLSTN3-211ENST00000541667 PPEF1O14829 653 aaPredicted RBP15.38■□□□□ 0.05
CLSTN3-211ENST00000541667 GRIPAP1Q4V328 841 aa15.38■□□□□ 0.05
CLSTN3-211ENST00000541667 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
CLSTN3-211ENST00000541667 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
CLSTN3-211ENST00000541667 ZNF428Q96B54 188 aa15.38■□□□□ 0.05
CLSTN3-211ENST00000541667 ANKRD36CQ5JPF3 1778 aa15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 BBOX1O75936 387 aa15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 ITGBL1O95965 494 aaPredicted RBP15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 RTFDC1Q9BY42 306 aaPredicted RBP15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 PHAXQ9H814 394 aaKnown RBP15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 SH3TC1Q8TE82 1336 aa15.37■□□□□ 0.05
CLSTN3-211ENST00000541667 SCN4AP35499 1836 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 IQCA1LA6NCM1 817 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 GNAI1P63096 354 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 GPC2Q8N158 579 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 PASKQ96RG2 1323 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 LAMB2P55268 1798 aa15.36■□□□□ 0.05
CLSTN3-211ENST00000541667 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
CLSTN3-211ENST00000541667 LDHDQ86WU2 507 aa15.35■□□□□ 0.05
CLSTN3-211ENST00000541667 TSPYL6Q8N831 410 aa15.35■□□□□ 0.05
CLSTN3-211ENST00000541667 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
CLSTN3-211ENST00000541667 TAF1P21675 1872 aa15.35■□□□□ 0.05
CLSTN3-211ENST00000541667 EPHX2P34913 555 aa15.34■□□□□ 0.05
CLSTN3-211ENST00000541667 IFFO2Q5TF58 517 aa15.34■□□□□ 0.05
CLSTN3-211ENST00000541667 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
CLSTN3-211ENST00000541667 VPS33BQ9H267 617 aa15.34■□□□□ 0.05
CLSTN3-211ENST00000541667 HACL1Q9UJ83 578 aa15.34■□□□□ 0.05
CLSTN3-211ENST00000541667 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
CLSTN3-211ENST00000541667 SCNN1DP51172 638 aa15.33■□□□□ 0.04
CLSTN3-211ENST00000541667 GRAPQ13588 217 aa15.33■□□□□ 0.04
CLSTN3-211ENST00000541667 CCDC27Q2M243 656 aa15.33■□□□□ 0.04
CLSTN3-211ENST00000541667 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.04
CLSTN3-211ENST00000541667 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
CLSTN3-211ENST00000541667 COL4A1P02462 1669 aa15.32■□□□□ 0.04
CLSTN3-211ENST00000541667 LTBP1Q14766 1721 aa15.32■□□□□ 0.04
CLSTN3-211ENST00000541667 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
CLSTN3-211ENST00000541667 AOC3Q16853 763 aa15.32■□□□□ 0.04
CLSTN3-211ENST00000541667 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
CLSTN3-211ENST00000541667 DDX60Q8IY21 1712 aaKnown RBP15.31■□□□□ 0.04
CLSTN3-211ENST00000541667 EPS15P42566 896 aa15.31■□□□□ 0.04
CLSTN3-211ENST00000541667 EIF6P56537 245 aaKnown RBP15.31■□□□□ 0.04
CLSTN3-211ENST00000541667 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
CLSTN3-211ENST00000541667 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
CLSTN3-211ENST00000541667 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms