RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
SUDS3-203ENST00000541591 COL4A1P02462 1669 aa18.33■□□□□ 0.52
SUDS3-203ENST00000541591 ZNF541Q9H0D2 1346 aa18.32■□□□□ 0.52
SUDS3-203ENST00000541591 APLP1P51693 650 aa18.32■□□□□ 0.52
SUDS3-203ENST00000541591 SYNE4Q8N205 404 aa18.32■□□□□ 0.52
SUDS3-203ENST00000541591 RPGRQ92834 1020 aaKnown RBP18.32■□□□□ 0.52
SUDS3-203ENST00000541591 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
SUDS3-203ENST00000541591 POTEIP0CG38 1075 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 POTEJP0CG39 1038 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 VEGFAP15692 232 aaPredicted RBP18.31■□□□□ 0.52
SUDS3-203ENST00000541591 SOGA3Q5TF21 947 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 LTBP1Q14766 1721 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 SNED1Q8TER0 1413 aa18.31■□□□□ 0.52
SUDS3-203ENST00000541591 MYH3P11055 1940 aa18.3■□□□□ 0.52
SUDS3-203ENST00000541591 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
SUDS3-203ENST00000541591 RIC1Q4ADV7 1423 aa18.3■□□□□ 0.52
SUDS3-203ENST00000541591 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
SUDS3-203ENST00000541591 CRY2Q49AN0 593 aa18.29■□□□□ 0.52
SUDS3-203ENST00000541591 DPY19L2Q6NUT2 758 aa18.29■□□□□ 0.52
SUDS3-203ENST00000541591 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
SUDS3-203ENST00000541591 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
SUDS3-203ENST00000541591 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
SUDS3-203ENST00000541591 PPP1R42Q7Z4L9 355 aa18.28■□□□□ 0.52
SUDS3-203ENST00000541591 SMC1BQ8NDV3 1235 aa18.28■□□□□ 0.52
SUDS3-203ENST00000541591 UTP14AQ9BVJ6 771 aaKnown RBP18.28■□□□□ 0.52
SUDS3-203ENST00000541591 DDX21Q9NR30 783 aaKnown RBP eCLIP18.28■□□□□ 0.52
SUDS3-203ENST00000541591 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
SUDS3-203ENST00000541591 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
SUDS3-203ENST00000541591 IARSP41252 1262 aaKnown RBP18.27■□□□□ 0.52
SUDS3-203ENST00000541591 FSTL1Q12841 308 aa18.27■□□□□ 0.52
SUDS3-203ENST00000541591 NLRP10Q86W26 655 aa18.27■□□□□ 0.52
SUDS3-203ENST00000541591 ADAMTSL1Q8N6G6 1762 aa18.27■□□□□ 0.51
SUDS3-203ENST00000541591 ATP5J2-PTCD1G3V325 749 aa18.26■□□□□ 0.51
SUDS3-203ENST00000541591 PARP10Q53GL7 1025 aa18.26■□□□□ 0.51
SUDS3-203ENST00000541591 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
SUDS3-203ENST00000541591 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
SUDS3-203ENST00000541591 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
SUDS3-203ENST00000541591 ABCC4O15439 1325 aa18.25■□□□□ 0.51
SUDS3-203ENST00000541591 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
SUDS3-203ENST00000541591 DNAJC5GQ8N7S2 189 aa18.25■□□□□ 0.51
SUDS3-203ENST00000541591 HOXA10P31260 410 aaPredicted RBP18.24■□□□□ 0.51
SUDS3-203ENST00000541591 TCIRG1Q13488 830 aa18.24■□□□□ 0.51
SUDS3-203ENST00000541591 NLRP3Q96P20 1036 aa18.24■□□□□ 0.51
SUDS3-203ENST00000541591 TRMT112Q9UI30 125 aaKnown RBP18.24■□□□□ 0.51
SUDS3-203ENST00000541591 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
SUDS3-203ENST00000541591 TRPM7Q96QT4 1865 aa18.23■□□□□ 0.51
SUDS3-203ENST00000541591 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
SUDS3-203ENST00000541591 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
SUDS3-203ENST00000541591 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
SUDS3-203ENST00000541591 DUOX1Q9NRD9 1551 aa18.22■□□□□ 0.51
SUDS3-203ENST00000541591 EAPPQ56P03 285 aaPredicted RBP18.22■□□□□ 0.51
SUDS3-203ENST00000541591 HSP90AB3PQ58FF7 597 aa18.22■□□□□ 0.51
SUDS3-203ENST00000541591 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
SUDS3-203ENST00000541591 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
SUDS3-203ENST00000541591 CRAMP1Q96RY5 1269 aa18.22■□□□□ 0.51
SUDS3-203ENST00000541591 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
SUDS3-203ENST00000541591 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
SUDS3-203ENST00000541591 IFT57Q9NWB7 429 aa18.21■□□□□ 0.51
SUDS3-203ENST00000541591 DBF4Q9UBU7 674 aaPredicted RBP18.21■□□□□ 0.51
SUDS3-203ENST00000541591 GNAI1P63096 354 aa18.2■□□□□ 0.5
SUDS3-203ENST00000541591 SLC10A5Q5PT55 438 aa18.2■□□□□ 0.5
SUDS3-203ENST00000541591 ANKRD13DQ6ZTN6 518 aa18.2■□□□□ 0.5
SUDS3-203ENST00000541591 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
SUDS3-203ENST00000541591 JARID2Q92833 1246 aaPredicted RBP18.2■□□□□ 0.5
SUDS3-203ENST00000541591 FAM89AQ96GI7 184 aa18.2■□□□□ 0.5
SUDS3-203ENST00000541591 PSMD1Q99460 953 aa18.2■□□□□ 0.5
SUDS3-203ENST00000541591 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
SUDS3-203ENST00000541591 SH3TC1Q8TE82 1336 aa18.2■□□□□ 0.5
SUDS3-203ENST00000541591 HOXB7P09629 217 aa18.19■□□□□ 0.5
SUDS3-203ENST00000541591 AOC3Q16853 763 aa18.19■□□□□ 0.5
SUDS3-203ENST00000541591 CHADLQ6NUI6 762 aa18.19■□□□□ 0.5
SUDS3-203ENST00000541591 LARGE2Q8N3Y3 721 aa18.19■□□□□ 0.5
SUDS3-203ENST00000541591 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
SUDS3-203ENST00000541591 KLRG1Q96E93 195 aa18.19■□□□□ 0.5
SUDS3-203ENST00000541591 TAF1DQ9H5J8 278 aaPredicted RBP18.19■□□□□ 0.5
SUDS3-203ENST00000541591 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
SUDS3-203ENST00000541591 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
SUDS3-203ENST00000541591 FZD9O00144 591 aa18.18■□□□□ 0.5
SUDS3-203ENST00000541591 ISCA1Q9BUE6 129 aa18.18■□□□□ 0.5
SUDS3-203ENST00000541591 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
SUDS3-203ENST00000541591 HYPKQ9NX55 129 aa18.18■□□□□ 0.5
SUDS3-203ENST00000541591 PCNTO95613 3336 aa18.18■□□□□ 0.5
SUDS3-203ENST00000541591 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
SUDS3-203ENST00000541591 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
SUDS3-203ENST00000541591 JDP2Q8WYK2 163 aa18.17■□□□□ 0.5
SUDS3-203ENST00000541591 L3MBTL3Q96JM7 780 aaPredicted RBP18.17■□□□□ 0.5
SUDS3-203ENST00000541591 MYD88Q99836 296 aa18.17■□□□□ 0.5
SUDS3-203ENST00000541591 HACL1Q9UJ83 578 aa18.17■□□□□ 0.5
SUDS3-203ENST00000541591 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
SUDS3-203ENST00000541591 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
SUDS3-203ENST00000541591 EPHX2P34913 555 aa18.16■□□□□ 0.5
SUDS3-203ENST00000541591 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
SUDS3-203ENST00000541591 CC2D2BQ6DHV5 1058 aa18.16■□□□□ 0.5
SUDS3-203ENST00000541591 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
SUDS3-203ENST00000541591 PSME4Q14997 1843 aa18.15■□□□□ 0.5
SUDS3-203ENST00000541591 IQCA1LA6NCM1 817 aa18.15■□□□□ 0.5
SUDS3-203ENST00000541591 EIF6P56537 245 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms