RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 KIF3BO15066 747 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 ZBTB24O43167 697 aaPredicted RBP7.19□□□□□ -1.26
DDB1-219ENST00000541513 FOXO3O43524 673 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 NR1I2O75469 434 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 F12P00748 615 aaPredicted RBP7.19□□□□□ -1.26
DDB1-219ENST00000541513 SLC10A3P09131 477 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 CBLBQ13191 982 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 KRBA2Q6ZNG9 492 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 TMC1Q8TDI8 760 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 GPRASP2Q96D09 838 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 SLC39A13Q96H72 371 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 SRPK1Q96SB4 655 aaKnown RBP7.19□□□□□ -1.26
DDB1-219ENST00000541513 THRAP3Q9Y2W1 955 aaKnown RBP7.19□□□□□ -1.26
DDB1-219ENST00000541513 CFAP43Q8NDM7 1665 aa7.19□□□□□ -1.26
DDB1-219ENST00000541513 PSDA5PKW4 1024 aaPredicted RBP7.18□□□□□ -1.26
DDB1-219ENST00000541513 EXOC5O00471 708 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 FZD6O60353 706 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 GIGYF1O75420 1035 aaPredicted RBP7.18□□□□□ -1.26
DDB1-219ENST00000541513 PPP4CP60510 307 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 RASA3Q14644 834 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 ALKBH2Q6NS38 261 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 FERMT3Q86UX7 667 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 ZNF454Q8N9F8 522 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 IL17RAQ96F46 866 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 SEC16BQ96JE7 1060 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 CEP89Q96ST8 783 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 SETDB2Q96T68 719 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 MTA3Q9BTC8 594 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 SNTG2Q9NY99 539 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 PNMA3Q9UL41 463 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 EID1Q9Y6B2 187 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 ASXL2Q76L83 1435 aa7.18□□□□□ -1.26
DDB1-219ENST00000541513 WDR7Q9Y4E6 1490 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 CDK13Q14004 1512 aaKnown RBP7.17□□□□□ -1.26
DDB1-219ENST00000541513 GLI2P10070 1586 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 DIP2BQ9P265 1576 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 GNALP38405 381 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 PAK2Q13177 524 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 VPS72Q15906 364 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 MAP9Q49MG5 647 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 IFFO2Q5TF58 517 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 RNF20Q5VTR2 975 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 APPBP2Q92624 585 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 SYMPKQ92797 1274 aaKnown RBP7.17□□□□□ -1.26
DDB1-219ENST00000541513 KCTD12Q96CX2 325 aaKnown RBP7.17□□□□□ -1.26
DDB1-219ENST00000541513 PURBQ96QR8 312 aaKnown RBP7.17□□□□□ -1.26
DDB1-219ENST00000541513 APBA2Q99767 749 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 HINFPQ9BQA5 517 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 JADE2Q9NQC1 790 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 FANCLQ9NW38 375 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 TCEAL9Q9UHQ7 104 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 DOLKQ9UPQ8 538 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 PCDHGA11Q9Y5H2 935 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 ABCC10Q5T3U5 1492 aa7.17□□□□□ -1.26
DDB1-219ENST00000541513 ARHGAP33O14559 1287 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 WDHD1O75717 1129 aaPredicted RBP7.16□□□□□ -1.26
DDB1-219ENST00000541513 IGFBP4P22692 258 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 NOS2P35228 1153 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 EXOSC10Q01780 885 aaKnown RBP7.16□□□□□ -1.26
DDB1-219ENST00000541513 PTK2Q05397 1052 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 SAMD3Q8N6K7 520 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 GPKOWQ92917 476 aaPredicted RBP eCLIP7.16□□□□□ -1.26
DDB1-219ENST00000541513 CFHR5Q9BXR6 569 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 ZNF408Q9H9D4 720 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 HOMER2Q9NSB8 354 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 CCDC87Q9NVE4 849 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 MAP3K1Q13233 1512 aa7.16□□□□□ -1.26
DDB1-219ENST00000541513 A0A0G2JS52 829 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 PNMA6FA0A0J9YX94 578 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 CCDC189A1A4V9 331 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 KLF4O43474 513 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 EIF1AXP47813 144 aaKnown RBP7.15□□□□□ -1.26
DDB1-219ENST00000541513 GYS2P54840 703 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 DHX8Q14562 1220 aaKnown RBP7.15□□□□□ -1.26
DDB1-219ENST00000541513 NAA30Q147X3 362 aaPredicted RBP7.15□□□□□ -1.26
DDB1-219ENST00000541513 DMRTA1Q5VZB9 504 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 PDXDC2PQ6P474 469 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 PCGF5Q86SE9 256 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 DEPDC7Q96QD5 511 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 OCSTAMPQ9BR26 566 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 SWAP70Q9UH65 585 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 GGT7Q9UJ14 662 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
DDB1-219ENST00000541513 TIAM1Q13009 1591 aa7.15□□□□□ -1.27
DDB1-219ENST00000541513 ESPNB1AK53 854 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 LCE2BO14633 110 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 PLIN1O60240 522 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 CAND2O75155 1236 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 COL9A1P20849 921 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 BDNFP23560 247 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 MASP1P48740 699 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 FUT2Q10981 343 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 TROQ12816 1431 aaPredicted RBP7.14□□□□□ -1.27
DDB1-219ENST00000541513 NFX1Q12986 1120 aaKnown RBP7.14□□□□□ -1.27
DDB1-219ENST00000541513 OS9Q13438 667 aaPredicted RBP7.14□□□□□ -1.27
DDB1-219ENST00000541513 HDAC1Q13547 482 aaPredicted RBP7.14□□□□□ -1.27
DDB1-219ENST00000541513 RAB33AQ14088 237 aa7.14□□□□□ -1.27
DDB1-219ENST00000541513 HLTFQ14527 1009 aaKnown RBP eCLIP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms