RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 LMOD1P29536 600 aaPredicted RBP8.71□□□□□ -1.02
RAP1B-224ENST00000541216 KANK4Q5T7N3 995 aaPredicted RBP8.71□□□□□ -1.02
RAP1B-224ENST00000541216 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
RAP1B-224ENST00000541216 KRTAP4-9Q9BYQ8 210 aa8.71□□□□□ -1.02
RAP1B-224ENST00000541216 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
RAP1B-224ENST00000541216 EML3Q32P44 896 aa8.7□□□□□ -1.02
RAP1B-224ENST00000541216 SLC30A3Q99726 388 aa8.7□□□□□ -1.02
RAP1B-224ENST00000541216 NEUROD4Q9HD90 331 aa8.7□□□□□ -1.02
RAP1B-224ENST00000541216 PCDHGA11Q9Y5H2 935 aa8.7□□□□□ -1.02
RAP1B-224ENST00000541216 MTFR1Q15390 333 aa8.68□□□□□ -1.02
RAP1B-224ENST00000541216 MKRN1Q9UHC7 482 aaKnown RBP8.68□□□□□ -1.02
RAP1B-224ENST00000541216 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
RAP1B-224ENST00000541216 A6NJY4 79 aa8.67□□□□□ -1.02
RAP1B-224ENST00000541216 SSTR4P31391 388 aa8.67□□□□□ -1.02
RAP1B-224ENST00000541216 CLDN10P78369 228 aa8.67□□□□□ -1.02
RAP1B-224ENST00000541216 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
RAP1B-224ENST00000541216 SFSWAPQ12872 951 aaKnown RBP8.67□□□□□ -1.02
RAP1B-224ENST00000541216 FMR1NBQ8N0W7 255 aaPredicted RBP8.67□□□□□ -1.02
RAP1B-224ENST00000541216 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
RAP1B-224ENST00000541216 SERTAD1Q9UHV2 236 aa8.67□□□□□ -1.02
RAP1B-224ENST00000541216 NOD1Q9Y239 953 aa8.67□□□□□ -1.02
RAP1B-224ENST00000541216 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
RAP1B-224ENST00000541216 DKK1O94907 266 aa8.66□□□□□ -1.02
RAP1B-224ENST00000541216 RFX1P22670 979 aa8.66□□□□□ -1.02
RAP1B-224ENST00000541216 GTF2IP78347 998 aa8.66□□□□□ -1.02
RAP1B-224ENST00000541216 LRRC69Q6ZNQ3 347 aa8.66□□□□□ -1.02
RAP1B-224ENST00000541216 WFDC12Q8WWY7 111 aa8.66□□□□□ -1.02
RAP1B-224ENST00000541216 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
RAP1B-224ENST00000541216 GPC6Q9Y625 555 aaPredicted RBP8.66□□□□□ -1.02
RAP1B-224ENST00000541216 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.65□□□□□ -1.02
RAP1B-224ENST00000541216 PRR23CQ6ZRP0 262 aa8.65□□□□□ -1.02
RAP1B-224ENST00000541216 JPH1Q9HDC5 661 aaPredicted RBP8.65□□□□□ -1.02
RAP1B-224ENST00000541216 OGFOD1Q8N543 542 aa8.64□□□□□ -1.03
RAP1B-224ENST00000541216 ARID3AQ99856 593 aa8.64□□□□□ -1.03
RAP1B-224ENST00000541216 VRTNQ9H8Y1 702 aa8.64□□□□□ -1.03
RAP1B-224ENST00000541216 TXLNAP40222 546 aa8.63□□□□□ -1.03
RAP1B-224ENST00000541216 IREB2P48200 963 aaKnown RBP8.63□□□□□ -1.03
RAP1B-224ENST00000541216 CD97P48960 835 aa8.63□□□□□ -1.03
RAP1B-224ENST00000541216 PTK7Q13308 1070 aa8.63□□□□□ -1.03
RAP1B-224ENST00000541216 CRTC2Q53ET0 693 aaPredicted RBP8.63□□□□□ -1.03
RAP1B-224ENST00000541216 TRIM50Q86XT4 487 aa8.63□□□□□ -1.03
RAP1B-224ENST00000541216 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
RAP1B-224ENST00000541216 TMEM229AB2RXF0 380 aa8.62□□□□□ -1.03
RAP1B-224ENST00000541216 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
RAP1B-224ENST00000541216 DMRTC2Q8IXT2 367 aaPredicted RBP8.62□□□□□ -1.03
RAP1B-224ENST00000541216 SIX5Q8N196 739 aa8.62□□□□□ -1.03
RAP1B-224ENST00000541216 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
RAP1B-224ENST00000541216 FAM196BA6NMK8 535 aa8.61□□□□□ -1.03
RAP1B-224ENST00000541216 FSTP19883 344 aa8.61□□□□□ -1.03
RAP1B-224ENST00000541216 RASA1P20936 1047 aa8.61□□□□□ -1.03
RAP1B-224ENST00000541216 RAB44Q7Z6P3 723 aaPredicted RBP8.61□□□□□ -1.03
RAP1B-224ENST00000541216 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
RAP1B-224ENST00000541216 DTWD1Q8N5C7 304 aa8.61□□□□□ -1.03
RAP1B-224ENST00000541216 USP3Q9Y6I4 520 aa8.61□□□□□ -1.03
RAP1B-224ENST00000541216 OAS3Q9Y6K5 1087 aaKnown RBP8.61□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L10C9JJH3 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L21D6R901 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 EML1O00423 815 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 NOS3P29474 1203 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 GP2P55259 537 aaKnown RBP8.6□□□□□ -1.03
RAP1B-224ENST00000541216 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 NUDT8Q8WV74 236 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 ARXQ96QS3 562 aa8.6□□□□□ -1.03
RAP1B-224ENST00000541216 UBE2OQ9C0C9 1292 aaKnown RBP8.6□□□□□ -1.03
RAP1B-224ENST00000541216 PPP1R15AO75807 674 aaPredicted RBP8.59□□□□□ -1.03
RAP1B-224ENST00000541216 ATG7O95352 703 aa8.59□□□□□ -1.03
RAP1B-224ENST00000541216 AFF1P51825 1210 aaKnown RBP8.59□□□□□ -1.03
RAP1B-224ENST00000541216 CCDC102BQ68D86 513 aa8.59□□□□□ -1.03
RAP1B-224ENST00000541216 ZNF594Q96JF6 807 aaPredicted RBP8.59□□□□□ -1.03
RAP1B-224ENST00000541216 KRTAP4-2Q9BYR5 136 aa8.59□□□□□ -1.03
RAP1B-224ENST00000541216 SLC6A14Q9UN76 642 aa8.59□□□□□ -1.03
RAP1B-224ENST00000541216 BACH1O14867 736 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 KCNQ4P56696 695 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 FBXO11Q86XK2 927 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 MEGF10Q96KG7 1140 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 ZMIZ1Q9ULJ6 1067 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 KCNH4Q9UQ05 1017 aa8.58□□□□□ -1.04
RAP1B-224ENST00000541216 ELOAQ14241 798 aaKnown RBP8.57□□□□□ -1.04
RAP1B-224ENST00000541216 TEAD4Q15561 434 aa8.57□□□□□ -1.04
RAP1B-224ENST00000541216 LARP1Q6PKG0 1096 aaKnown RBP8.57□□□□□ -1.04
RAP1B-224ENST00000541216 IGF2-ASQ6U949 168 aa8.57□□□□□ -1.04
RAP1B-224ENST00000541216 BHMTQ93088 406 aa8.57□□□□□ -1.04
RAP1B-224ENST00000541216 ZNF358Q9NW07 568 aa8.57□□□□□ -1.04
RAP1B-224ENST00000541216 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
RAP1B-224ENST00000541216 RGS9O75916 674 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms