RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 SIX5Q8N196 739 aa11.39□□□□□ -0.59
SMCO2-205ENST00000541168 ZNF594Q96JF6 807 aaPredicted RBP11.39□□□□□ -0.59
SMCO2-205ENST00000541168 MKRN1Q9UHC7 482 aaKnown RBP11.39□□□□□ -0.59
SMCO2-205ENST00000541168 SLC6A14Q9UN76 642 aa11.39□□□□□ -0.59
SMCO2-205ENST00000541168 A0A0A0MRY4 1105 aa11.38□□□□□ -0.59
SMCO2-205ENST00000541168 ELNP15502 786 aa11.38□□□□□ -0.59
SMCO2-205ENST00000541168 ADGRE1Q14246 886 aa11.38□□□□□ -0.59
SMCO2-205ENST00000541168 MBTPS1Q14703 1052 aa11.38□□□□□ -0.59
SMCO2-205ENST00000541168 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
SMCO2-205ENST00000541168 ALDH16A1Q8IZ83 802 aa11.38□□□□□ -0.59
SMCO2-205ENST00000541168 JPH1Q9HDC5 661 aaPredicted RBP11.38□□□□□ -0.59
SMCO2-205ENST00000541168 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
SMCO2-205ENST00000541168 C21orf2O43822 256 aa11.37□□□□□ -0.59
SMCO2-205ENST00000541168 SELPP16109 830 aa11.37□□□□□ -0.59
SMCO2-205ENST00000541168 HIF1AQ16665 826 aa11.37□□□□□ -0.59
SMCO2-205ENST00000541168 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
SMCO2-205ENST00000541168 IGFLR1Q9H665 355 aa11.37□□□□□ -0.59
SMCO2-205ENST00000541168 RAC1P63000 192 aa11.36□□□□□ -0.59
SMCO2-205ENST00000541168 ARTNQ5T4W7 220 aa11.36□□□□□ -0.59
SMCO2-205ENST00000541168 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
SMCO2-205ENST00000541168 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
SMCO2-205ENST00000541168 STAG2Q8N3U4 1231 aa11.35□□□□□ -0.59
SMCO2-205ENST00000541168 NUDT8Q8WV74 236 aa11.35□□□□□ -0.59
SMCO2-205ENST00000541168 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
SMCO2-205ENST00000541168 KRTAP9-2Q9BYQ4 174 aa11.35□□□□□ -0.59
SMCO2-205ENST00000541168 ZFP64Q9NPA5 681 aa11.35□□□□□ -0.59
SMCO2-205ENST00000541168 DKK1O94907 266 aa11.34□□□□□ -0.59
SMCO2-205ENST00000541168 H2AFB1P0C5Y9 115 aa11.34□□□□□ -0.59
SMCO2-205ENST00000541168 H2AFB2P0C5Z0 115 aa11.34□□□□□ -0.59
SMCO2-205ENST00000541168 NGLY1Q96IV0 654 aa11.34□□□□□ -0.59
SMCO2-205ENST00000541168 EFCC1Q9HA90 598 aa11.34□□□□□ -0.59
SMCO2-205ENST00000541168 ATAD2Q6PL18 1390 aa11.33□□□□□ -0.6
SMCO2-205ENST00000541168 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.33□□□□□ -0.6
SMCO2-205ENST00000541168 NRG1Q02297 640 aaPredicted RBP11.33□□□□□ -0.6
SMCO2-205ENST00000541168 SCG3Q8WXD2 468 aaKnown RBP11.33□□□□□ -0.6
SMCO2-205ENST00000541168 LENG1Q96BZ8 264 aaPredicted RBP11.33□□□□□ -0.6
SMCO2-205ENST00000541168 DNAJB12Q9NXW2 375 aaKnown RBP11.33□□□□□ -0.6
SMCO2-205ENST00000541168 NAGPAQ9UK23 515 aa11.33□□□□□ -0.6
SMCO2-205ENST00000541168 PSAPL1Q6NUJ1 521 aa11.32□□□□□ -0.6
SMCO2-205ENST00000541168 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
SMCO2-205ENST00000541168 PNMA5Q96PV4 448 aa11.32□□□□□ -0.6
SMCO2-205ENST00000541168 AFF1P51825 1210 aaKnown RBP11.31□□□□□ -0.6
SMCO2-205ENST00000541168 FLIIQ13045 1269 aa11.31□□□□□ -0.6
SMCO2-205ENST00000541168 IER5Q5VY09 327 aa11.31□□□□□ -0.6
SMCO2-205ENST00000541168 GAS2L2Q8NHY3 880 aa11.31□□□□□ -0.6
SMCO2-205ENST00000541168 CHMP7Q8WUX9 453 aaPredicted RBP11.31□□□□□ -0.6
SMCO2-205ENST00000541168 GSX2Q9BZM3 304 aa11.31□□□□□ -0.6
SMCO2-205ENST00000541168 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.31□□□□□ -0.6
SMCO2-205ENST00000541168 FMR1NBQ8N0W7 255 aaPredicted RBP11.3□□□□□ -0.6
SMCO2-205ENST00000541168 NFKB1P19838 968 aa11.29□□□□□ -0.6
SMCO2-205ENST00000541168 KRTAP9-6A0A140TA67 174 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 TGFBR3LH3BV60 316 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 RGS9O75916 674 aaPredicted RBP11.28□□□□□ -0.6
SMCO2-205ENST00000541168 RASA1P20936 1047 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 SEC13P55735 322 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 CCINQ13939 588 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 RTN1Q16799 776 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 USP21Q9UK80 565 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
SMCO2-205ENST00000541168 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
SMCO2-205ENST00000541168 DMRTC2Q8IXT2 367 aaPredicted RBP11.27□□□□□ -0.61
SMCO2-205ENST00000541168 TP53INP1Q96A56 240 aa11.27□□□□□ -0.61
SMCO2-205ENST00000541168 LRP8Q14114 963 aa11.25□□□□□ -0.61
SMCO2-205ENST00000541168 ILDR2Q71H61 639 aa11.25□□□□□ -0.61
SMCO2-205ENST00000541168 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
SMCO2-205ENST00000541168 EPB42P16452 691 aa11.24□□□□□ -0.61
SMCO2-205ENST00000541168 FAM35AQ86V20 835 aa11.24□□□□□ -0.61
SMCO2-205ENST00000541168 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
SMCO2-205ENST00000541168 DMGDHQ9UI17 866 aaKnown RBP11.24□□□□□ -0.61
SMCO2-205ENST00000541168 PCSK7Q16549 785 aa11.23□□□□□ -0.61
SMCO2-205ENST00000541168 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
SMCO2-205ENST00000541168 CPB1P15086 417 aa11.22□□□□□ -0.61
SMCO2-205ENST00000541168 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
SMCO2-205ENST00000541168 MSL1Q68DK7 614 aa11.22□□□□□ -0.61
SMCO2-205ENST00000541168 HINFPQ9BQA5 517 aa11.22□□□□□ -0.61
SMCO2-205ENST00000541168 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
SMCO2-205ENST00000541168 NACADO15069 1562 aa11.21□□□□□ -0.61
SMCO2-205ENST00000541168 DTWD1Q8N5C7 304 aa11.21□□□□□ -0.61
SMCO2-205ENST00000541168 GLMNQ92990 594 aa11.21□□□□□ -0.61
SMCO2-205ENST00000541168 LPIN3Q9BQK8 851 aa11.21□□□□□ -0.61
SMCO2-205ENST00000541168 LGR5O75473 907 aa11.2□□□□□ -0.62
SMCO2-205ENST00000541168 MAP3K6O95382 1288 aa11.2□□□□□ -0.62
SMCO2-205ENST00000541168 IGFBP4P22692 258 aa11.2□□□□□ -0.62
SMCO2-205ENST00000541168 IDH3AP50213 366 aa11.2□□□□□ -0.62
SMCO2-205ENST00000541168 LARP1Q6PKG0 1096 aaKnown RBP11.2□□□□□ -0.62
SMCO2-205ENST00000541168 FRRS1LQ9P0K9 344 aa11.2□□□□□ -0.62
SMCO2-205ENST00000541168 CRTC2Q53ET0 693 aaPredicted RBP11.19□□□□□ -0.62
SMCO2-205ENST00000541168 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
SMCO2-205ENST00000541168 FBXO11Q86XK2 927 aa11.19□□□□□ -0.62
SMCO2-205ENST00000541168 INPP5BP32019 993 aa11.18□□□□□ -0.62
SMCO2-205ENST00000541168 DPYDQ12882 1025 aa11.18□□□□□ -0.62
SMCO2-205ENST00000541168 GRIK5Q16478 980 aa11.18□□□□□ -0.62
SMCO2-205ENST00000541168 PERM1Q5SV97 790 aa11.18□□□□□ -0.62
SMCO2-205ENST00000541168 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
SMCO2-205ENST00000541168 KLK14Q9P0G3 267 aa11.18□□□□□ -0.62
SMCO2-205ENST00000541168 ZFATQ9P243 1243 aa11.18□□□□□ -0.62
SMCO2-205ENST00000541168 HYAL3O43820 417 aaPredicted RBP11.17□□□□□ -0.62
SMCO2-205ENST00000541168 ARSDP51689 593 aa11.17□□□□□ -0.62
SMCO2-205ENST00000541168 PTK7Q13308 1070 aa11.17□□□□□ -0.62
SMCO2-205ENST00000541168 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms