RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 RXRAP19793 462 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 ZNF592Q92610 1267 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 FAM227BQ96M60 508 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 RNF17Q9BXT8 1623 aaKnown RBP11.3□□□□□ -0.6
TTC39C-203ENST00000540918 KDM2BQ8NHM5 1336 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 GCKRQ14397 625 aa11.29□□□□□ -0.6
TTC39C-203ENST00000540918 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
TTC39C-203ENST00000540918 CCNL1Q9UK58 526 aaPredicted RBP11.29□□□□□ -0.6
TTC39C-203ENST00000540918 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
TTC39C-203ENST00000540918 ERBB3P21860 1342 aa11.29□□□□□ -0.6
TTC39C-203ENST00000540918 KIF1BO60333 1816 aa11.29□□□□□ -0.6
TTC39C-203ENST00000540918 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
TTC39C-203ENST00000540918 SPC24Q8NBT2 197 aa11.29□□□□□ -0.6
TTC39C-203ENST00000540918 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
TTC39C-203ENST00000540918 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
TTC39C-203ENST00000540918 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
TTC39C-203ENST00000540918 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
TTC39C-203ENST00000540918 PDCP20941 246 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 TRMT1LQ7Z2T5 733 aaKnown RBP11.28□□□□□ -0.6
TTC39C-203ENST00000540918 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 TRMT2AQ8IZ69 625 aaKnown RBP11.28□□□□□ -0.6
TTC39C-203ENST00000540918 CCDC34Q96HJ3 373 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 PANK2Q9BZ23 570 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
TTC39C-203ENST00000540918 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 IQGAP3Q86VI3 1631 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 SYCE3A1L190 88 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 ITGA6P23229 1130 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 CDC5LQ99459 802 aaKnown RBP11.28□□□□□ -0.6
TTC39C-203ENST00000540918 UTP14AQ9BVJ6 771 aaKnown RBP11.28□□□□□ -0.6
TTC39C-203ENST00000540918 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 CTNNA3Q9UI47 895 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 WDR33Q9C0J8 1336 aaKnown RBP11.28□□□□□ -0.6
TTC39C-203ENST00000540918 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 IFIT3O14879 490 aaKnown RBP11.28□□□□□ -0.6
TTC39C-203ENST00000540918 TPM4P67936 248 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 CCDC152Q4G0S7 254 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
TTC39C-203ENST00000540918 TET3O43151 1660 aa11.27□□□□□ -0.6
TTC39C-203ENST00000540918 CHMLP26374 656 aa11.27□□□□□ -0.6
TTC39C-203ENST00000540918 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.6
TTC39C-203ENST00000540918 PLXNC1O60486 1568 aa11.27□□□□□ -0.6
TTC39C-203ENST00000540918 CYP27B1O15528 508 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 E9PCH4 1651 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 GOLGA8BA8MQT2 603 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
TTC39C-203ENST00000540918 NOC3LQ8WTT2 800 aaKnown RBP11.27□□□□□ -0.61
TTC39C-203ENST00000540918 SPATA32Q96LK8 384 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 PAG1Q9NWQ8 432 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 CEP152O94986 1710 aa11.27□□□□□ -0.61
TTC39C-203ENST00000540918 CFAP74Q9C0B2 1584 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 CYP7A1P22680 504 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 MSL1Q68DK7 614 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 ZBTB1Q9Y2K1 713 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 MAP3K4Q9Y6R4 1608 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 KINO60870 393 aaKnown RBP11.26□□□□□ -0.61
TTC39C-203ENST00000540918 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
TTC39C-203ENST00000540918 GJB2P29033 226 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 KRT85P78386 507 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 ANKRD1Q15327 319 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 ZKSCAN3Q9BRR0 538 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 RIMBP3CA6NJZ7 1639 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 RIMBP3BA6NNM3 1639 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 RIMBP3Q9UFD9 1639 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
TTC39C-203ENST00000540918 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
TTC39C-203ENST00000540918 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
TTC39C-203ENST00000540918 SEC62Q99442 399 aaKnown RBP11.25□□□□□ -0.61
TTC39C-203ENST00000540918 CWC22Q9HCG8 908 aaKnown RBP11.25□□□□□ -0.61
TTC39C-203ENST00000540918 ABCA9Q8IUA7 1624 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 GSPT1P15170 499 aaKnown RBP11.25□□□□□ -0.61
TTC39C-203ENST00000540918 KRT32Q14532 448 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 LRRC24Q50LG9 513 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 EAF2Q96CJ1 260 aaPredicted RBP11.25□□□□□ -0.61
TTC39C-203ENST00000540918 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
TTC39C-203ENST00000540918 STX8Q9UNK0 236 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 ARHGEF10O15013 1369 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 SNAP23O00161 211 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
TTC39C-203ENST00000540918 CKAP2LQ8IYA6 745 aa11.25□□□□□ -0.61
TTC39C-203ENST00000540918 PICALMQ13492 652 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 BEND3Q5T5X7 828 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 TPTE2Q6XPS3 522 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 XBP1P17861 261 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 CCAR2Q8N163 923 aaKnown RBP11.24□□□□□ -0.61
TTC39C-203ENST00000540918 TCEAL9Q9UHQ7 104 aa11.24□□□□□ -0.61
TTC39C-203ENST00000540918 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms