RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 FER1L6Q2WGJ9 1857 aa13.44□□□□□ -0.26
CDCA3-208ENST00000540683 APAF1O14727 1248 aa13.44□□□□□ -0.26
CDCA3-208ENST00000540683 RASSF7Q02833 373 aa13.44□□□□□ -0.26
CDCA3-208ENST00000540683 CRY2Q49AN0 593 aa13.44□□□□□ -0.26
CDCA3-208ENST00000540683 TTLL7Q6ZT98 887 aa13.44□□□□□ -0.26
CDCA3-208ENST00000540683 CRAMP1Q96RY5 1269 aa13.44□□□□□ -0.26
CDCA3-208ENST00000540683 DICER1Q9UPY3 1922 aaKnown RBP13.44□□□□□ -0.26
CDCA3-208ENST00000540683 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 NFKBIEO00221 500 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-208ENST00000540683 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDCA3-208ENST00000540683 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 COPS6Q7L5N1 327 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 TMC4Q7Z404 712 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 SMC1BQ8NDV3 1235 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 PLBD2Q8NHP8 589 aa13.43□□□□□ -0.26
CDCA3-208ENST00000540683 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 TIAM2Q8IVF5 1701 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 DDX58O95786 925 aaKnown RBP13.42□□□□□ -0.26
CDCA3-208ENST00000540683 GPTP24298 496 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 PDIA6Q15084 440 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 XAGE3Q8WTP9 111 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 JDP2Q8WYK2 163 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 PSMD1Q99460 953 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 NMRK2Q9NPI5 230 aa13.42□□□□□ -0.26
CDCA3-208ENST00000540683 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-208ENST00000540683 SLX4Q8IY92 1834 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 NTSR2O95665 410 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 AIMP1Q12904 312 aaKnown RBP13.41□□□□□ -0.26
CDCA3-208ENST00000540683 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 SUPT20HQ8NEM7 779 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 RRAGCQ9HB90 399 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 MRS2Q9HD23 443 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
CDCA3-208ENST00000540683 CACNA1SQ13698 1873 aa13.41□□□□□ -0.26
CDCA3-208ENST00000540683 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 BBOX1O75936 387 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 C7orf43Q8WVR3 580 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 STK31Q9BXU1 1019 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 MBIPQ9NS73 344 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
CDCA3-208ENST00000540683 IL16Q14005 1332 aa13.39□□□□□ -0.27
CDCA3-208ENST00000540683 UBN2Q6ZU65 1347 aa13.39□□□□□ -0.27
CDCA3-208ENST00000540683 DDX46Q7L014 1031 aaKnown RBP13.39□□□□□ -0.27
CDCA3-208ENST00000540683 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
CDCA3-208ENST00000540683 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
CDCA3-208ENST00000540683 PPEF1O14829 653 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-208ENST00000540683 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
CDCA3-208ENST00000540683 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
CDCA3-208ENST00000540683 NLRP10Q86W26 655 aa13.38□□□□□ -0.27
CDCA3-208ENST00000540683 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
CDCA3-208ENST00000540683 ABCC12Q96J65 1359 aa13.37□□□□□ -0.27
CDCA3-208ENST00000540683 IARSP41252 1262 aaKnown RBP13.37□□□□□ -0.27
CDCA3-208ENST00000540683 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
CDCA3-208ENST00000540683 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
CDCA3-208ENST00000540683 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-208ENST00000540683 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
CDCA3-208ENST00000540683 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
CDCA3-208ENST00000540683 CEP350Q5VT06 3117 aa13.35□□□□□ -0.27
CDCA3-208ENST00000540683 SCN4AP35499 1836 aa13.35□□□□□ -0.27
CDCA3-208ENST00000540683 ANXA1P04083 346 aa13.35□□□□□ -0.27
CDCA3-208ENST00000540683 NEXNQ0ZGT2 675 aa13.35□□□□□ -0.27
CDCA3-208ENST00000540683 WDR63Q8IWG1 891 aa13.35□□□□□ -0.27
CDCA3-208ENST00000540683 GPC2Q8N158 579 aa13.35□□□□□ -0.27
CDCA3-208ENST00000540683 L3MBTL3Q96JM7 780 aaPredicted RBP13.35□□□□□ -0.27
CDCA3-208ENST00000540683 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-208ENST00000540683 WWC1Q8IX03 1113 aa13.34□□□□□ -0.27
CDCA3-208ENST00000540683 SP8Q8IXZ3 490 aa13.34□□□□□ -0.27
CDCA3-208ENST00000540683 CCDC191Q8NCU4 936 aa13.34□□□□□ -0.27
CDCA3-208ENST00000540683 ISCA1Q9BUE6 129 aa13.34□□□□□ -0.27
CDCA3-208ENST00000540683 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-208ENST00000540683 FZD9O00144 591 aa13.33□□□□□ -0.28
CDCA3-208ENST00000540683 GRAPQ13588 217 aa13.33□□□□□ -0.28
CDCA3-208ENST00000540683 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
CDCA3-208ENST00000540683 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-208ENST00000540683 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
CDCA3-208ENST00000540683 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
CDCA3-208ENST00000540683 GRAPLQ8TC17 118 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-208ENST00000540683 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
CDCA3-208ENST00000540683 PRELPP51888 382 aa13.32□□□□□ -0.28
CDCA3-208ENST00000540683 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
CDCA3-208ENST00000540683 LDHDQ86WU2 507 aa13.32□□□□□ -0.28
CDCA3-208ENST00000540683 MPNDQ8N594 471 aa13.32□□□□□ -0.28
CDCA3-208ENST00000540683 ZBTB38Q8NAP3 1195 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-208ENST00000540683 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
CDCA3-208ENST00000540683 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-208ENST00000540683 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
CDCA3-208ENST00000540683 ABCC4O15439 1325 aa13.32□□□□□ -0.28
CDCA3-208ENST00000540683 ELL2O00472 640 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms