RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 GCC2Q8IWJ2 1684 aa6.26□□□□□ -1.41
C2CD3-214ENST00000540057 PTCH1Q13635 1447 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 ERBINQ96RT1 1412 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 BRWD3Q6RI45 1802 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 SCTRP47872 440 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 CNTNAP3BQ96NU0 1288 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 COL25A1Q9BXS0 654 aaPredicted RBP6.25□□□□□ -1.41
C2CD3-214ENST00000540057 CNTNAP3Q9BZ76 1288 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 CUEDC1Q9NWM3 386 aaPredicted RBP6.25□□□□□ -1.41
C2CD3-214ENST00000540057 AMOTL2Q9Y2J4 779 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 TMEM131LA2VDJ0 1609 aa6.25□□□□□ -1.41
C2CD3-214ENST00000540057 UNC13BO14795 1591 aa6.24□□□□□ -1.41
C2CD3-214ENST00000540057 KANK1Q14678 1352 aa6.24□□□□□ -1.41
C2CD3-214ENST00000540057 KIF15Q9NS87 1388 aa6.24□□□□□ -1.41
C2CD3-214ENST00000540057 RNF144AP50876 292 aaPredicted RBP6.24□□□□□ -1.41
C2CD3-214ENST00000540057 SF3B2Q13435 895 aaKnown RBP6.24□□□□□ -1.41
C2CD3-214ENST00000540057 VWA5B2Q8N398 1253 aa6.24□□□□□ -1.41
C2CD3-214ENST00000540057 RRP7BPQ9NSQ0 103 aa6.24□□□□□ -1.41
C2CD3-214ENST00000540057 LAMC1P11047 1609 aa6.24□□□□□ -1.41
C2CD3-214ENST00000540057 TRPM2O94759 1503 aa6.24□□□□□ -1.41
C2CD3-214ENST00000540057 GLI3P10071 1580 aa6.23□□□□□ -1.41
C2CD3-214ENST00000540057 SPHKAPQ2M3C7 1700 aa6.23□□□□□ -1.41
C2CD3-214ENST00000540057 MARF1Q9Y4F3 1742 aaKnown RBP6.23□□□□□ -1.41
C2CD3-214ENST00000540057 ATP5J2-PTCD1G3V325 749 aa6.23□□□□□ -1.41
C2CD3-214ENST00000540057 TRAK2O60296 914 aa6.23□□□□□ -1.41
C2CD3-214ENST00000540057 CC2D2BQ6DHV5 1058 aa6.23□□□□□ -1.41
C2CD3-214ENST00000540057 LYSMD3Q7Z3D4 306 aa6.23□□□□□ -1.41
C2CD3-214ENST00000540057 OSBPL3Q9H4L5 887 aa6.23□□□□□ -1.41
C2CD3-214ENST00000540057 COL22A1Q8NFW1 1626 aaPredicted RBP6.23□□□□□ -1.41
C2CD3-214ENST00000540057 XRN1Q8IZH2 1706 aaKnown RBP6.22□□□□□ -1.41
C2CD3-214ENST00000540057 CDC14CA4D256 554 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 RHOQP17081 205 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 GPC1P35052 558 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 GSK3AP49840 483 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 MCCD1P59942 119 aaPredicted RBP6.22□□□□□ -1.41
C2CD3-214ENST00000540057 RNF20Q5VTR2 975 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.22□□□□□ -1.41
C2CD3-214ENST00000540057 TBC1D2BQ9UPU7 963 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 PCDHB11Q9Y5F2 797 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.22□□□□□ -1.41
C2CD3-214ENST00000540057 MYOM2P54296 1465 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 C1orf167Q5SNV9 1468 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 RALGAPBQ86X10 1494 aa6.22□□□□□ -1.41
C2CD3-214ENST00000540057 A0A1W2PRU2 124 aa6.21□□□□□ -1.42
C2CD3-214ENST00000540057 SLURP2P0DP57 97 aa6.21□□□□□ -1.42
C2CD3-214ENST00000540057 IRF5Q13568 498 aa6.21□□□□□ -1.42
C2CD3-214ENST00000540057 GAS6Q14393 721 aa6.21□□□□□ -1.42
C2CD3-214ENST00000540057 ZNF385CQ66K41 422 aaPredicted RBP6.21□□□□□ -1.42
C2CD3-214ENST00000540057 SV2AQ7L0J3 742 aa6.21□□□□□ -1.42
C2CD3-214ENST00000540057 PRICKLE2Q7Z3G6 844 aa6.21□□□□□ -1.42
C2CD3-214ENST00000540057 NALCNQ8IZF0 1738 aa6.21□□□□□ -1.42
C2CD3-214ENST00000540057 CROCC2H7BZ55 1655 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 MYOM3Q5VTT5 1437 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 ADGRL3Q9HAR2 1447 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 MEN1O00255 615 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 BAG6P46379 1132 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 CLN3Q13286 438 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 R3HDM1Q15032 1099 aaKnown RBP6.2□□□□□ -1.42
C2CD3-214ENST00000540057 CYP2U1Q7Z449 544 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 WHAMMQ8TF30 809 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 CCDC85AQ96PX6 553 aaPredicted RBP6.2□□□□□ -1.42
C2CD3-214ENST00000540057 ORAI2Q96SN7 254 aa6.2□□□□□ -1.42
C2CD3-214ENST00000540057 RPRD2Q5VT52 1461 aaKnown RBP6.2□□□□□ -1.42
C2CD3-214ENST00000540057 ABCC5O15440 1437 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 NRXN3Q9Y4C0 1643 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 APBB1O00213 710 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 UNC5CLQ8IV45 518 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 ZNF837Q96EG3 531 aaPredicted RBP6.19□□□□□ -1.42
C2CD3-214ENST00000540057 GRIP2Q9C0E4 1043 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 ARHGEF10LQ9HCE6 1279 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 CEP126Q9P2H0 1117 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 ZNF330Q9Y3S2 320 aaPredicted RBP6.19□□□□□ -1.42
C2CD3-214ENST00000540057 SLIT2O94813 1529 aa6.19□□□□□ -1.42
C2CD3-214ENST00000540057 KRT27Q7Z3Y8 459 aa6.18□□□□□ -1.42
C2CD3-214ENST00000540057 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
C2CD3-214ENST00000540057 METP08581 1390 aa6.18□□□□□ -1.42
C2CD3-214ENST00000540057 SPATA31C2B4DYI2 1134 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 ARHGEF15O94989 841 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 IL2RAP01589 272 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 KCNMA1Q12791 1236 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 POU4F2Q12837 409 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 RAB6BQ9NRW1 208 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 ADAMTS8Q9UP79 889 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 HRH3Q9Y5N1 445 aa6.17□□□□□ -1.42
C2CD3-214ENST00000540057 NBPF10Q6P3W6 841 aaKnown RBP6.16□□□□□ -1.42
C2CD3-214ENST00000540057 TRIM22Q8IYM9 498 aa6.16□□□□□ -1.42
C2CD3-214ENST00000540057 PHTF2Q8N3S3 785 aa6.16□□□□□ -1.42
C2CD3-214ENST00000540057 NBPF15Q8N660 670 aa6.16□□□□□ -1.42
C2CD3-214ENST00000540057 NLRP3Q96P20 1036 aa6.16□□□□□ -1.42
C2CD3-214ENST00000540057 DYRK1BQ9Y463 629 aa6.16□□□□□ -1.42
C2CD3-214ENST00000540057 RGPD1P0DJD0 1748 aa6.16□□□□□ -1.42
C2CD3-214ENST00000540057 DAPK1P53355 1430 aa6.16□□□□□ -1.42
C2CD3-214ENST00000540057 PXDNQ92626 1479 aa6.15□□□□□ -1.42
C2CD3-214ENST00000540057 PTPN23Q9H3S7 1636 aa6.15□□□□□ -1.42
C2CD3-214ENST00000540057 THBS1P07996 1170 aa6.15□□□□□ -1.42
C2CD3-214ENST00000540057 VPS72Q15906 364 aa6.15□□□□□ -1.42
C2CD3-214ENST00000540057 EZH2Q15910 746 aaKnown RBP6.15□□□□□ -1.42
C2CD3-214ENST00000540057 DBN1Q16643 649 aa6.15□□□□□ -1.42
C2CD3-214ENST00000540057 TSGA10IPQ3SY00 556 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms