RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 FLT4P35916 1363 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 PALLDQ8WX93 1383 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 APAF1O14727 1248 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 FYB1O15117 783 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 XRCC6P12956 609 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCDC60-204ENST00000539847 KCNQ4P56696 695 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 MCM6Q14566 821 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 SKOR2Q2VWA4 1001 aaPredicted RBP9.56□□□□□ -0.88
CCDC60-204ENST00000539847 SKAP1Q86WV1 359 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 SLAIN1Q8ND83 568 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 PHOX2BQ99453 314 aa9.56□□□□□ -0.88
CCDC60-204ENST00000539847 RRAGDQ9NQL2 400 aaPredicted RBP9.56□□□□□ -0.88
CCDC60-204ENST00000539847 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
CCDC60-204ENST00000539847 HSPA6P17066 643 aa9.55□□□□□ -0.88
CCDC60-204ENST00000539847 SSFA2P28290 1259 aa9.55□□□□□ -0.88
CCDC60-204ENST00000539847 SNX21Q969T3 373 aa9.55□□□□□ -0.88
CCDC60-204ENST00000539847 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
CCDC60-204ENST00000539847 PNNQ9H307 717 aaKnown RBP9.55□□□□□ -0.88
CCDC60-204ENST00000539847 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.55□□□□□ -0.88
CCDC60-204ENST00000539847 NCAPD2Q15021 1401 aa9.55□□□□□ -0.88
CCDC60-204ENST00000539847 BCAR3O75815 825 aa9.54□□□□□ -0.88
CCDC60-204ENST00000539847 RARSP54136 660 aaKnown RBP9.54□□□□□ -0.88
CCDC60-204ENST00000539847 TERF1P54274 439 aa9.54□□□□□ -0.88
CCDC60-204ENST00000539847 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
CCDC60-204ENST00000539847 TYW1BQ6NUM6 668 aa9.54□□□□□ -0.88
CCDC60-204ENST00000539847 WWC1Q8IX03 1113 aa9.54□□□□□ -0.88
CCDC60-204ENST00000539847 NECTIN2Q92692 538 aa9.54□□□□□ -0.88
CCDC60-204ENST00000539847 C5P01031 1676 aa9.53□□□□□ -0.88
CCDC60-204ENST00000539847 CYP27B1O15528 508 aa9.53□□□□□ -0.88
CCDC60-204ENST00000539847 RRS1Q15050 365 aaKnown RBP9.53□□□□□ -0.88
CCDC60-204ENST00000539847 RUNDC1Q96C34 613 aa9.53□□□□□ -0.88
CCDC60-204ENST00000539847 TMUB1Q9BVT8 246 aa9.53□□□□□ -0.88
CCDC60-204ENST00000539847 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
CCDC60-204ENST00000539847 TPM2P07951 284 aa9.52□□□□□ -0.89
CCDC60-204ENST00000539847 MDM2Q00987 491 aaPredicted RBP9.52□□□□□ -0.89
CCDC60-204ENST00000539847 HDAC1Q13547 482 aaPredicted RBP9.52□□□□□ -0.89
CCDC60-204ENST00000539847 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
CCDC60-204ENST00000539847 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
CCDC60-204ENST00000539847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
CCDC60-204ENST00000539847 DDIT3P35638 169 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 MPRIPQ6WCQ1 1025 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 PIGBQ92521 554 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 GGNBP2Q9H3C7 697 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 PDZRN3Q9UPQ7 1066 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 SPG7Q9UQ90 795 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 IGSF1Q8N6C5 1336 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 C4BP0C0L5 1744 aa9.51□□□□□ -0.89
CCDC60-204ENST00000539847 CICQ96RK0 1608 aaPredicted RBP9.5□□□□□ -0.89
CCDC60-204ENST00000539847 TAF1LQ8IZX4 1826 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 LOC102724428A0A0B4J2F2 783 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 FBLN1P23142 703 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 RBM25P49756 843 aaKnown RBP9.5□□□□□ -0.89
CCDC60-204ENST00000539847 SIK1P57059 783 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 TGFB2P61812 414 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 CLEC17AQ6ZS10 378 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 SMC5Q8IY18 1101 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
CCDC60-204ENST00000539847 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
CCDC60-204ENST00000539847 CANXP27824 592 aaKnown RBP9.49□□□□□ -0.89
CCDC60-204ENST00000539847 APLP1P51693 650 aa9.49□□□□□ -0.89
CCDC60-204ENST00000539847 HSP90AA2PQ14568 343 aaPredicted RBP9.49□□□□□ -0.89
CCDC60-204ENST00000539847 HS1BP3Q53T59 392 aa9.49□□□□□ -0.89
CCDC60-204ENST00000539847 C22orf23Q9BZE7 217 aa9.49□□□□□ -0.89
CCDC60-204ENST00000539847 COG6Q9Y2V7 657 aa9.49□□□□□ -0.89
CCDC60-204ENST00000539847 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
CCDC60-204ENST00000539847 KIF16BQ96L93 1317 aa9.49□□□□□ -0.89
CCDC60-204ENST00000539847 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
CCDC60-204ENST00000539847 RGPD2P0DJD1 1756 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 ESPNB1AK53 854 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 SSTR3P32745 418 aaPredicted RBP9.48□□□□□ -0.89
CCDC60-204ENST00000539847 FOSBP53539 338 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
CCDC60-204ENST00000539847 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
CCDC60-204ENST00000539847 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 PANK1Q8TE04 598 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 KHSRPQ92945 711 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC60-204ENST00000539847 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 SLKQ9H2G2 1235 aaPredicted RBP9.48□□□□□ -0.89
CCDC60-204ENST00000539847 CHMP4BQ9H444 224 aaKnown RBP9.48□□□□□ -0.89
CCDC60-204ENST00000539847 GRPEL1Q9HAV7 217 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 GPCPD1Q9NPB8 672 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 UBR3Q6ZT12 1888 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 IL16Q14005 1332 aa9.48□□□□□ -0.89
CCDC60-204ENST00000539847 IBTKQ9P2D0 1353 aaPredicted RBP9.48□□□□□ -0.89
CCDC60-204ENST00000539847 TOMM70O94826 608 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 SKIV2LQ15477 1246 aaKnown RBP9.47□□□□□ -0.89
CCDC60-204ENST00000539847 C6orf132Q5T0Z8 1188 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 ZKSCAN2Q63HK3 967 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 AMIGO3Q86WK7 504 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 LINC00116Q8NCU8 138 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 GBP4Q96PP9 640 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 TRAIPQ9BWF2 469 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 SERPINA10Q9UK55 444 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 TOGARAM1Q9Y4F4 1720 aa9.47□□□□□ -0.89
CCDC60-204ENST00000539847 MAP2P11137 1827 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms