RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
CCDC7-209ENST00000539197 BTLAQ7Z6A9 289 aa11.58□□□□□ -0.56
CCDC7-209ENST00000539197 BHMTQ93088 406 aa11.58□□□□□ -0.56
CCDC7-209ENST00000539197 A6NJR5 290 aa11.57□□□□□ -0.56
CCDC7-209ENST00000539197 ADH7P40394 386 aa11.57□□□□□ -0.56
CCDC7-209ENST00000539197 HIF1AQ16665 826 aa11.57□□□□□ -0.56
CCDC7-209ENST00000539197 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L10C9JJH3 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L21D6R901 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 PRRT3Q5FWE3 981 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
CCDC7-209ENST00000539197 TBC1D8BQ0IIM8 1120 aa11.54□□□□□ -0.56
CCDC7-209ENST00000539197 DOC2BQ14184 412 aa11.54□□□□□ -0.56
CCDC7-209ENST00000539197 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
CCDC7-209ENST00000539197 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
CCDC7-209ENST00000539197 PRDM6Q9NQX0 595 aa11.54□□□□□ -0.56
CCDC7-209ENST00000539197 GRNP28799 593 aaKnown RBP11.53□□□□□ -0.56
CCDC7-209ENST00000539197 ARXQ96QS3 562 aa11.53□□□□□ -0.56
CCDC7-209ENST00000539197 VRTNQ9H8Y1 702 aa11.53□□□□□ -0.56
CCDC7-209ENST00000539197 GATA4P43694 442 aa11.52□□□□□ -0.57
CCDC7-209ENST00000539197 CDCA8Q53HL2 280 aa11.52□□□□□ -0.57
CCDC7-209ENST00000539197 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.57
CCDC7-209ENST00000539197 KLK14Q9P0G3 267 aa11.52□□□□□ -0.57
CCDC7-209ENST00000539197 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
CCDC7-209ENST00000539197 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
CCDC7-209ENST00000539197 NID1P14543 1247 aa11.51□□□□□ -0.57
CCDC7-209ENST00000539197 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
CCDC7-209ENST00000539197 DMGDHQ9UI17 866 aaKnown RBP11.51□□□□□ -0.57
CCDC7-209ENST00000539197 APBA3O96018 575 aa11.5□□□□□ -0.57
CCDC7-209ENST00000539197 ITGB7P26010 798 aa11.5□□□□□ -0.57
CCDC7-209ENST00000539197 RTN1Q16799 776 aa11.5□□□□□ -0.57
CCDC7-209ENST00000539197 GSX2Q9BZM3 304 aa11.5□□□□□ -0.57
CCDC7-209ENST00000539197 UBE2OQ9C0C9 1292 aaKnown RBP11.5□□□□□ -0.57
CCDC7-209ENST00000539197 IGFBP4P22692 258 aa11.49□□□□□ -0.57
CCDC7-209ENST00000539197 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
CCDC7-209ENST00000539197 IER5Q5VY09 327 aa11.49□□□□□ -0.57
CCDC7-209ENST00000539197 EFCC1Q9HA90 598 aa11.49□□□□□ -0.57
CCDC7-209ENST00000539197 GRIK4Q16099 956 aa11.48□□□□□ -0.57
CCDC7-209ENST00000539197 TGFBR3LH3BV60 316 aa11.47□□□□□ -0.57
CCDC7-209ENST00000539197 XP32Q5T750 250 aa11.47□□□□□ -0.57
CCDC7-209ENST00000539197 NUDT8Q8WV74 236 aa11.47□□□□□ -0.57
CCDC7-209ENST00000539197 QTRT2Q9H974 415 aaKnown RBP11.47□□□□□ -0.57
CCDC7-209ENST00000539197 SLC6A14Q9UN76 642 aa11.47□□□□□ -0.57
CCDC7-209ENST00000539197 LILRB5O75023 590 aa11.46□□□□□ -0.57
CCDC7-209ENST00000539197 NFKB1P19838 968 aa11.46□□□□□ -0.57
CCDC7-209ENST00000539197 PNMA5Q96PV4 448 aa11.46□□□□□ -0.57
CCDC7-209ENST00000539197 DNAJB12Q9NXW2 375 aaKnown RBP11.46□□□□□ -0.57
CCDC7-209ENST00000539197 NAGPAQ9UK23 515 aa11.46□□□□□ -0.57
CCDC7-209ENST00000539197 WEE1P30291 646 aa11.45□□□□□ -0.58
CCDC7-209ENST00000539197 DGKZQ13574 1117 aa11.45□□□□□ -0.58
CCDC7-209ENST00000539197 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
CCDC7-209ENST00000539197 RFX1P22670 979 aa11.44□□□□□ -0.58
CCDC7-209ENST00000539197 SEMA6BQ9H3T3 888 aa11.44□□□□□ -0.58
CCDC7-209ENST00000539197 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.44□□□□□ -0.58
CCDC7-209ENST00000539197 INPP5BP32019 993 aa11.43□□□□□ -0.58
CCDC7-209ENST00000539197 IDH3AP50213 366 aa11.43□□□□□ -0.58
CCDC7-209ENST00000539197 CCINQ13939 588 aa11.43□□□□□ -0.58
CCDC7-209ENST00000539197 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
CCDC7-209ENST00000539197 KRT25Q7Z3Z0 450 aa11.43□□□□□ -0.58
CCDC7-209ENST00000539197 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
CCDC7-209ENST00000539197 USP20Q9Y2K6 914 aa11.43□□□□□ -0.58
CCDC7-209ENST00000539197 EPB42P16452 691 aa11.42□□□□□ -0.58
CCDC7-209ENST00000539197 ZFATQ9P243 1243 aa11.42□□□□□ -0.58
CCDC7-209ENST00000539197 PSAPL1Q6NUJ1 521 aa11.41□□□□□ -0.58
CCDC7-209ENST00000539197 TPSG1Q9NRR2 321 aa11.41□□□□□ -0.58
CCDC7-209ENST00000539197 LRFN2Q9ULH4 789 aa11.41□□□□□ -0.58
CCDC7-209ENST00000539197 FAM200AQ8TCP9 573 aa11.4□□□□□ -0.58
CCDC7-209ENST00000539197 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
CCDC7-209ENST00000539197 ZBTB42B2RXF5 422 aa11.39□□□□□ -0.59
CCDC7-209ENST00000539197 TARSP26639 723 aaKnown RBP11.39□□□□□ -0.59
CCDC7-209ENST00000539197 AFF1P51825 1210 aaKnown RBP11.39□□□□□ -0.59
CCDC7-209ENST00000539197 PLAURQ03405 335 aa11.39□□□□□ -0.59
CCDC7-209ENST00000539197 RSPO4Q2I0M5 234 aaPredicted RBP11.39□□□□□ -0.59
CCDC7-209ENST00000539197 A0A0A0MRY4 1105 aa11.38□□□□□ -0.59
CCDC7-209ENST00000539197 FOXO3O43524 673 aa11.38□□□□□ -0.59
CCDC7-209ENST00000539197 MICAL2O94851 1124 aa11.38□□□□□ -0.59
CCDC7-209ENST00000539197 Q8N3U1 123 aa11.38□□□□□ -0.59
CCDC7-209ENST00000539197 PRIMPOLQ96LW4 560 aa11.38□□□□□ -0.59
CCDC7-209ENST00000539197 SASH3O75995 380 aa11.37□□□□□ -0.59
CCDC7-209ENST00000539197 CPB1P15086 417 aa11.37□□□□□ -0.59
CCDC7-209ENST00000539197 SELPP16109 830 aa11.37□□□□□ -0.59
CCDC7-209ENST00000539197 MLLT1Q03111 559 aaPredicted RBP11.37□□□□□ -0.59
CCDC7-209ENST00000539197 PCSK7Q16549 785 aa11.37□□□□□ -0.59
CCDC7-209ENST00000539197 SHISA2Q6UWI4 295 aa11.37□□□□□ -0.59
CCDC7-209ENST00000539197 IFT43Q96FT9 208 aa11.37□□□□□ -0.59
CCDC7-209ENST00000539197 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
CCDC7-209ENST00000539197 C9orf172C9J069 976 aa11.36□□□□□ -0.59
CCDC7-209ENST00000539197 OPLAHO14841 1288 aa11.36□□□□□ -0.59
CCDC7-209ENST00000539197 RAC1P63000 192 aa11.36□□□□□ -0.59
CCDC7-209ENST00000539197 FKBP5Q13451 457 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms