RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 HOXB7P09629 217 aa19.46■□□□□ 0.71
RAB40B-202ENST00000538809 CRY2Q49AN0 593 aa19.46■□□□□ 0.71
RAB40B-202ENST00000538809 PARP10Q53GL7 1025 aa19.46■□□□□ 0.71
RAB40B-202ENST00000538809 PPP1R42Q7Z4L9 355 aa19.46■□□□□ 0.71
RAB40B-202ENST00000538809 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
RAB40B-202ENST00000538809 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
RAB40B-202ENST00000538809 GLTPD2A6NH11 291 aa19.45■□□□□ 0.7
RAB40B-202ENST00000538809 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
RAB40B-202ENST00000538809 RPGRQ92834 1020 aaKnown RBP19.45■□□□□ 0.7
RAB40B-202ENST00000538809 GNAI1P63096 354 aa19.44■□□□□ 0.7
RAB40B-202ENST00000538809 ZNF428Q96B54 188 aa19.44■□□□□ 0.7
RAB40B-202ENST00000538809 UTP14AQ9BVJ6 771 aaKnown RBP19.44■□□□□ 0.7
RAB40B-202ENST00000538809 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
RAB40B-202ENST00000538809 SNED1Q8TER0 1413 aa19.43■□□□□ 0.7
RAB40B-202ENST00000538809 ALDH1B1P30837 517 aa19.43■□□□□ 0.7
RAB40B-202ENST00000538809 CALD1Q05682 793 aaKnown RBP19.43■□□□□ 0.7
RAB40B-202ENST00000538809 HSP90AB3PQ58FF7 597 aa19.43■□□□□ 0.7
RAB40B-202ENST00000538809 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
RAB40B-202ENST00000538809 SCN4AP35499 1836 aa19.42■□□□□ 0.7
RAB40B-202ENST00000538809 ELL2O00472 640 aaPredicted RBP19.42■□□□□ 0.7
RAB40B-202ENST00000538809 FKBP4Q02790 459 aaKnown RBP eCLIP19.42■□□□□ 0.7
RAB40B-202ENST00000538809 NLRP10Q86W26 655 aa19.42■□□□□ 0.7
RAB40B-202ENST00000538809 RBM46Q8TBY0 533 aaKnown RBP19.42■□□□□ 0.7
RAB40B-202ENST00000538809 ZNF277Q9NRM2 450 aaPredicted RBP19.42■□□□□ 0.7
RAB40B-202ENST00000538809 DBF4Q9UBU7 674 aaPredicted RBP19.42■□□□□ 0.7
RAB40B-202ENST00000538809 TCIRG1Q13488 830 aa19.41■□□□□ 0.7
RAB40B-202ENST00000538809 CCDC27Q2M243 656 aa19.41■□□□□ 0.7
RAB40B-202ENST00000538809 HOXA10P31260 410 aaPredicted RBP19.4■□□□□ 0.7
RAB40B-202ENST00000538809 NCBP3Q53F19 620 aaKnown RBP19.4■□□□□ 0.7
RAB40B-202ENST00000538809 SYNE4Q8N205 404 aa19.4■□□□□ 0.7
RAB40B-202ENST00000538809 PLBD2Q8NHP8 589 aa19.4■□□□□ 0.7
RAB40B-202ENST00000538809 CACNA1FO60840 1977 aa19.4■□□□□ 0.7
RAB40B-202ENST00000538809 COL4A5P29400 1685 aa19.4■□□□□ 0.7
RAB40B-202ENST00000538809 TCERG1O14776 1098 aaKnown RBP19.39■□□□□ 0.69
RAB40B-202ENST00000538809 DPY19L2Q6NUT2 758 aa19.39■□□□□ 0.69
RAB40B-202ENST00000538809 RTKN2Q8IZC4 609 aa19.39■□□□□ 0.69
RAB40B-202ENST00000538809 C8orf58Q8NAV2 365 aa19.39■□□□□ 0.69
RAB40B-202ENST00000538809 TSR2Q969E8 191 aaKnown RBP19.39■□□□□ 0.69
RAB40B-202ENST00000538809 RBM17Q96I25 401 aaKnown RBP19.39■□□□□ 0.69
RAB40B-202ENST00000538809 NLRP3Q96P20 1036 aa19.39■□□□□ 0.69
RAB40B-202ENST00000538809 HYPKQ9NX55 129 aa19.39■□□□□ 0.69
RAB40B-202ENST00000538809 LRRC37AA6NMS7 1700 aa19.39■□□□□ 0.69
RAB40B-202ENST00000538809 PPEF1O14829 653 aaPredicted RBP19.38■□□□□ 0.69
RAB40B-202ENST00000538809 MYH3P11055 1940 aa19.38■□□□□ 0.69
RAB40B-202ENST00000538809 HCLS1P14317 486 aaPredicted RBP19.38■□□□□ 0.69
RAB40B-202ENST00000538809 VEGFAP15692 232 aaPredicted RBP19.38■□□□□ 0.69
RAB40B-202ENST00000538809 RNF123Q5XPI4 1314 aa19.38■□□□□ 0.69
RAB40B-202ENST00000538809 ANKRD13DQ6ZTN6 518 aa19.38■□□□□ 0.69
RAB40B-202ENST00000538809 TRMT112Q9UI30 125 aaKnown RBP19.38■□□□□ 0.69
RAB40B-202ENST00000538809 ABCC4O15439 1325 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 SH3TC1Q8TE82 1336 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 ZNF541Q9H0D2 1346 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 POTECB2RU33 542 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 ATP5J2-PTCD1G3V325 749 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 DDNO94850 711 aaPredicted RBP19.37■□□□□ 0.69
RAB40B-202ENST00000538809 SLC10A5Q5PT55 438 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 CRAMP1Q96RY5 1269 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
RAB40B-202ENST00000538809 SPEF2Q9C093 1822 aa19.37■□□□□ 0.69
RAB40B-202ENST00000538809 COL4A1P02462 1669 aa19.36■□□□□ 0.69
RAB40B-202ENST00000538809 IARSP41252 1262 aaKnown RBP19.36■□□□□ 0.69
RAB40B-202ENST00000538809 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
RAB40B-202ENST00000538809 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
RAB40B-202ENST00000538809 APLP1P51693 650 aa19.35■□□□□ 0.69
RAB40B-202ENST00000538809 FSTL1Q12841 308 aa19.35■□□□□ 0.69
RAB40B-202ENST00000538809 ISCA1Q9BUE6 129 aa19.35■□□□□ 0.69
RAB40B-202ENST00000538809 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
RAB40B-202ENST00000538809 SMC1BQ8NDV3 1235 aa19.34■□□□□ 0.69
RAB40B-202ENST00000538809 PSMD1Q99460 953 aa19.34■□□□□ 0.69
RAB40B-202ENST00000538809 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
RAB40B-202ENST00000538809 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.68
RAB40B-202ENST00000538809 CC2D2BQ6DHV5 1058 aa19.33■□□□□ 0.68
RAB40B-202ENST00000538809 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.68
RAB40B-202ENST00000538809 FAM89AQ96GI7 184 aa19.33■□□□□ 0.68
RAB40B-202ENST00000538809 IL16Q14005 1332 aa19.32■□□□□ 0.68
RAB40B-202ENST00000538809 LTBP1Q14766 1721 aa19.32■□□□□ 0.68
RAB40B-202ENST00000538809 HTRA3P83110 453 aa19.32■□□□□ 0.68
RAB40B-202ENST00000538809 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
RAB40B-202ENST00000538809 DUOX1Q9NRD9 1551 aa19.32■□□□□ 0.68
RAB40B-202ENST00000538809 MYD88Q99836 296 aa19.31■□□□□ 0.68
RAB40B-202ENST00000538809 ADAMTSL1Q8N6G6 1762 aa19.31■□□□□ 0.68
RAB40B-202ENST00000538809 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
RAB40B-202ENST00000538809 ATP6V0A2Q9Y487 856 aa19.3■□□□□ 0.68
RAB40B-202ENST00000538809 POTEIP0CG38 1075 aa19.29■□□□□ 0.68
RAB40B-202ENST00000538809 POTEJP0CG39 1038 aa19.29■□□□□ 0.68
RAB40B-202ENST00000538809 GRAPQ13588 217 aa19.29■□□□□ 0.68
RAB40B-202ENST00000538809 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
RAB40B-202ENST00000538809 GRAPLQ8TC17 118 aaPredicted RBP19.29■□□□□ 0.68
RAB40B-202ENST00000538809 L3MBTL3Q96JM7 780 aaPredicted RBP19.29■□□□□ 0.68
RAB40B-202ENST00000538809 FANCIQ9NVI1 1328 aa19.28■□□□□ 0.68
RAB40B-202ENST00000538809 FZD9O00144 591 aa19.28■□□□□ 0.68
RAB40B-202ENST00000538809 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
RAB40B-202ENST00000538809 GRIPAP1Q4V328 841 aa19.28■□□□□ 0.68
RAB40B-202ENST00000538809 LARGE2Q8N3Y3 721 aa19.28■□□□□ 0.68
RAB40B-202ENST00000538809 JDP2Q8WYK2 163 aa19.28■□□□□ 0.68
RAB40B-202ENST00000538809 TMX4Q9H1E5 349 aaPredicted RBP19.28■□□□□ 0.68
RAB40B-202ENST00000538809 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
RAB40B-202ENST00000538809 PPIP5K2O43314 1243 aa19.27■□□□□ 0.68
RAB40B-202ENST00000538809 AOC3Q16853 763 aa19.27■□□□□ 0.68
RAB40B-202ENST00000538809 IQCA1LA6NCM1 817 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms