RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 TRMT2AQ8IZ69 625 aaKnown RBP6.72□□□□□ -1.33
LINC02408-202ENST00000538573 NKX2-3Q8TAU0 364 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 TSR2Q969E8 191 aaKnown RBP6.72□□□□□ -1.33
LINC02408-202ENST00000538573 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
LINC02408-202ENST00000538573 IFT57Q9NWB7 429 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 TRPC5Q9UL62 973 aaPredicted RBP6.72□□□□□ -1.33
LINC02408-202ENST00000538573 V9GY48 417 aaPredicted RBP6.72□□□□□ -1.33
LINC02408-202ENST00000538573 PKD1L3Q7Z443 1732 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 WNK3Q9BYP7 1800 aa6.71□□□□□ -1.33
LINC02408-202ENST00000538573 PLEKHG2Q9H7P9 1386 aa6.71□□□□□ -1.33
LINC02408-202ENST00000538573 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.71□□□□□ -1.34
LINC02408-202ENST00000538573 HSP90AB1P08238 724 aaKnown RBP6.71□□□□□ -1.34
LINC02408-202ENST00000538573 TAF7Q15545 349 aaPredicted RBP6.71□□□□□ -1.34
LINC02408-202ENST00000538573 KMT5BQ4FZB7 885 aa6.71□□□□□ -1.34
LINC02408-202ENST00000538573 KCNV2Q8TDN2 545 aa6.71□□□□□ -1.34
LINC02408-202ENST00000538573 DCAF5Q96JK2 942 aa6.71□□□□□ -1.34
LINC02408-202ENST00000538573 GJD4Q96KN9 370 aaPredicted RBP6.71□□□□□ -1.34
LINC02408-202ENST00000538573 MBIPQ9NS73 344 aa6.71□□□□□ -1.34
LINC02408-202ENST00000538573 MIS18AQ9NYP9 233 aa6.71□□□□□ -1.34
LINC02408-202ENST00000538573 FANCIQ9NVI1 1328 aa6.71□□□□□ -1.34
LINC02408-202ENST00000538573 SCN11AQ9UI33 1791 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 DISP2A7MBM2 1401 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 CHL1O00533 1208 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 LCE2BO14633 110 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 ZPR1O75312 459 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 ZNF853P0CG23 659 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 CABP4P57796 275 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 EXOSC9Q06265 439 aaKnown RBP6.7□□□□□ -1.34
LINC02408-202ENST00000538573 PTGDRQ13258 359 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 ZNF772Q68DY9 489 aaPredicted RBP6.7□□□□□ -1.34
LINC02408-202ENST00000538573 TMUB1Q9BVT8 246 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 TSPYL4Q9UJ04 414 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 KAT6BQ8WYB5 2073 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 SHANK3Q9BYB0 1731 aa6.7□□□□□ -1.34
LINC02408-202ENST00000538573 CEMIPQ8WUJ3 1361 aa6.69□□□□□ -1.34
LINC02408-202ENST00000538573 ATRNO75882 1429 aa6.69□□□□□ -1.34
LINC02408-202ENST00000538573 BTBD11A6QL63 1104 aa6.69□□□□□ -1.34
LINC02408-202ENST00000538573 ELL2O00472 640 aaPredicted RBP6.69□□□□□ -1.34
LINC02408-202ENST00000538573 NFATC2IPQ8NCF5 419 aa6.69□□□□□ -1.34
LINC02408-202ENST00000538573 ZNF775Q96BV0 537 aaPredicted RBP6.69□□□□□ -1.34
LINC02408-202ENST00000538573 SLC52A2Q9HAB3 445 aa6.69□□□□□ -1.34
LINC02408-202ENST00000538573 RCAN3Q9UKA8 241 aa6.69□□□□□ -1.34
LINC02408-202ENST00000538573 SUPT16HQ9Y5B9 1047 aaKnown RBP6.69□□□□□ -1.34
LINC02408-202ENST00000538573 KDM6AO15550 1401 aaPredicted RBP6.68□□□□□ -1.34
LINC02408-202ENST00000538573 ERVV-2B6SEH9 535 aa6.68□□□□□ -1.34
LINC02408-202ENST00000538573 TULP1O00294 542 aaPredicted RBP6.68□□□□□ -1.34
LINC02408-202ENST00000538573 MARCH10Q8NA82 808 aaPredicted RBP6.68□□□□□ -1.34
LINC02408-202ENST00000538573 C8orf58Q8NAV2 365 aa6.68□□□□□ -1.34
LINC02408-202ENST00000538573 BABAM1Q9NWV8 329 aa6.68□□□□□ -1.34
LINC02408-202ENST00000538573 PDZRN3Q9UPQ7 1066 aa6.68□□□□□ -1.34
LINC02408-202ENST00000538573 GLI3P10071 1580 aa6.68□□□□□ -1.34
LINC02408-202ENST00000538573 LRRC37A3O60309 1634 aa6.68□□□□□ -1.34
LINC02408-202ENST00000538573 TNS2Q63HR2 1409 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 SIPA1L3O60292 1781 aaPredicted RBP6.67□□□□□ -1.34
LINC02408-202ENST00000538573 RCCD1A6NED2 376 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 KCNQ3O43525 872 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 RBM6P78332 1123 aaKnown RBP6.67□□□□□ -1.34
LINC02408-202ENST00000538573 SLC39A6Q13433 755 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 KRT24Q2M2I5 525 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
LINC02408-202ENST00000538573 SEPT12Q8IYM1 358 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 TSPYL6Q8N831 410 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 SYTL4Q96C24 671 aaPredicted RBP6.67□□□□□ -1.34
LINC02408-202ENST00000538573 TMOD3Q9NYL9 352 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 ADAMTS7Q9UKP4 1686 aa6.67□□□□□ -1.34
LINC02408-202ENST00000538573 THSD7AQ9UPZ6 1657 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 VAMP4O75379 141 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
LINC02408-202ENST00000538573 RXRBP28702 533 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 EIF4A1P60842 406 aaKnown RBP6.66□□□□□ -1.34
LINC02408-202ENST00000538573 SMYD5Q6GMV2 418 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 ZNF790Q6PG37 636 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 BLOC1S3Q6QNY0 202 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 TTC5Q8N0Z6 440 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 ACSBG1Q96GR2 724 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 TMEM134Q9H6X4 195 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 ADGRG1Q9Y653 693 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 KDM3BQ7LBC6 1761 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 ITGB4P16144 1822 aa6.66□□□□□ -1.34
LINC02408-202ENST00000538573 TCERG1O14776 1098 aaKnown RBP6.65□□□□□ -1.34
LINC02408-202ENST00000538573 BCAR3O75815 825 aa6.65□□□□□ -1.34
LINC02408-202ENST00000538573 OATP04181 439 aa6.65□□□□□ -1.34
LINC02408-202ENST00000538573 RARSP54136 660 aaKnown RBP6.65□□□□□ -1.34
LINC02408-202ENST00000538573 FAM161AQ3B820 660 aa6.65□□□□□ -1.34
LINC02408-202ENST00000538573 FAM182BQ5T319 152 aa6.65□□□□□ -1.34
LINC02408-202ENST00000538573 PIGBQ92521 554 aa6.65□□□□□ -1.34
LINC02408-202ENST00000538573 BCL2L13Q9BXK5 485 aa6.65□□□□□ -1.34
LINC02408-202ENST00000538573 DOT1LQ8TEK3 1739 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 TOGARAM1Q9Y4F4 1720 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 SEMA3EO15041 775 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 ACTN4O43707 911 aaKnown RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 PLIN1O60240 522 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 PTCD1O75127 700 aaKnown RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 NEFLP07196 543 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 CFHP08603 1231 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 EIF2S2P20042 333 aaKnown RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 CANXP27824 592 aaKnown RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 SLC19A1P41440 591 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 POTEAQ6S8J7 498 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms