RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 NECAB1Q8N987 351 aa18.56■□□□□ 0.56
CDH20-203ENST00000538374 SLC39A6Q13433 755 aa18.56■□□□□ 0.56
CDH20-203ENST00000538374 NFATC2IPQ8NCF5 419 aa18.56■□□□□ 0.56
CDH20-203ENST00000538374 INTS4Q96HW7 963 aaKnown RBP18.56■□□□□ 0.56
CDH20-203ENST00000538374 SIL1Q9H173 461 aa18.56■□□□□ 0.56
CDH20-203ENST00000538374 NOL7Q9UMY1 257 aaKnown RBP18.56■□□□□ 0.56
CDH20-203ENST00000538374 OFD1O75665 1012 aa18.55■□□□□ 0.56
CDH20-203ENST00000538374 CARD10Q9BWT7 1032 aa18.55■□□□□ 0.56
CDH20-203ENST00000538374 CCDC8Q9H0W5 538 aaPredicted RBP18.55■□□□□ 0.56
CDH20-203ENST00000538374 CHMP3Q9Y3E7 222 aa18.55■□□□□ 0.56
CDH20-203ENST00000538374 RAD50Q92878 1312 aa18.55■□□□□ 0.56
CDH20-203ENST00000538374 SYT1P21579 422 aa18.55■□□□□ 0.56
CDH20-203ENST00000538374 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
CDH20-203ENST00000538374 TSPY26PQ9H489 355 aa18.55■□□□□ 0.56
CDH20-203ENST00000538374 C9orf78Q9NZ63 289 aaPredicted RBP18.55■□□□□ 0.56
CDH20-203ENST00000538374 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
CDH20-203ENST00000538374 MBD3O95983 291 aa18.54■□□□□ 0.56
CDH20-203ENST00000538374 CNTROBQ8N137 903 aa18.54■□□□□ 0.56
CDH20-203ENST00000538374 TTC14Q96N46 770 aa18.54■□□□□ 0.56
CDH20-203ENST00000538374 ARFGEF2Q9Y6D5 1785 aa18.54■□□□□ 0.56
CDH20-203ENST00000538374 PLCB2Q00722 1185 aa18.54■□□□□ 0.56
CDH20-203ENST00000538374 FAM173BQ6P4H8 233 aa18.54■□□□□ 0.56
CDH20-203ENST00000538374 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
CDH20-203ENST00000538374 RAB11FIP3O75154 756 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 C17orf53Q8N3J3 647 aaPredicted RBP18.53■□□□□ 0.56
CDH20-203ENST00000538374 FAM227BQ96M60 508 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 TLR7Q9NYK1 1049 aaKnown RBP18.53■□□□□ 0.56
CDH20-203ENST00000538374 TAF6LQ9Y6J9 622 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 PCDH11XQ9BZA7 1347 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 PCDH11YQ9BZA8 1340 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 PTMAP06454 111 aaKnown RBP18.53■□□□□ 0.56
CDH20-203ENST00000538374 TOM1L2Q6ZVM7 507 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 DIAPH3Q9NSV4 1193 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 USP25Q9UHP3 1055 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 NDUFB9Q9Y6M9 179 aa18.53■□□□□ 0.56
CDH20-203ENST00000538374 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
CDH20-203ENST00000538374 CHGBP05060 677 aa18.52■□□□□ 0.55
CDH20-203ENST00000538374 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.55
CDH20-203ENST00000538374 NKX1-1Q15270 411 aaPredicted RBP18.52■□□□□ 0.55
CDH20-203ENST00000538374 LARP1Q6PKG0 1096 aaKnown RBP18.52■□□□□ 0.55
CDH20-203ENST00000538374 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.55
CDH20-203ENST00000538374 ZNF496Q96IT1 587 aaPredicted RBP18.52■□□□□ 0.55
CDH20-203ENST00000538374 DDX21Q9NR30 783 aaKnown RBP eCLIP18.52■□□□□ 0.55
CDH20-203ENST00000538374 AACSQ86V21 672 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 EDC3Q96F86 508 aaKnown RBP18.51■□□□□ 0.55
CDH20-203ENST00000538374 ZKSCAN5Q9Y2L8 839 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 NUP188Q5SRE5 1749 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 NRAPQ86VF7 1730 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 STX6O43752 255 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 DNM1Q05193 864 aaKnown RBP18.51■□□□□ 0.55
CDH20-203ENST00000538374 FERMT3Q86UX7 667 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 HYPKQ9NX55 129 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 SMC3Q9UQE7 1217 aa18.51■□□□□ 0.55
CDH20-203ENST00000538374 DISP2A7MBM2 1401 aa18.5■□□□□ 0.55
CDH20-203ENST00000538374 ZSCAN22P10073 491 aaPredicted RBP18.5■□□□□ 0.55
CDH20-203ENST00000538374 GIMAP6Q6P9H5 292 aa18.5■□□□□ 0.55
CDH20-203ENST00000538374 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
CDH20-203ENST00000538374 LIMCH1Q9UPQ0 1083 aa18.5■□□□□ 0.55
CDH20-203ENST00000538374 TNS2Q63HR2 1409 aa18.5■□□□□ 0.55
CDH20-203ENST00000538374 GJB2P29033 226 aa18.5■□□□□ 0.55
CDH20-203ENST00000538374 CLASRPQ8N2M8 674 aaKnown RBP18.5■□□□□ 0.55
CDH20-203ENST00000538374 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
CDH20-203ENST00000538374 ITGB4P16144 1822 aa18.5■□□□□ 0.55
CDH20-203ENST00000538374 AFDNP55196 1824 aaKnown RBP18.5■□□□□ 0.55
CDH20-203ENST00000538374 PHLPP1O60346 1717 aa18.5■□□□□ 0.55
CDH20-203ENST00000538374 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
CDH20-203ENST00000538374 ST3GAL1Q11201 340 aa18.49■□□□□ 0.55
CDH20-203ENST00000538374 KSR2Q6VAB6 950 aa18.49■□□□□ 0.55
CDH20-203ENST00000538374 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
CDH20-203ENST00000538374 FAM13BQ9NYF5 915 aa18.49■□□□□ 0.55
CDH20-203ENST00000538374 IFIT2P09913 472 aaKnown RBP18.49■□□□□ 0.55
CDH20-203ENST00000538374 IL2RBP14784 551 aa18.49■□□□□ 0.55
CDH20-203ENST00000538374 SUCLG2Q96I99 432 aa18.49■□□□□ 0.55
CDH20-203ENST00000538374 MYL6BP14649 208 aa18.48■□□□□ 0.55
CDH20-203ENST00000538374 EAF2Q96CJ1 260 aaPredicted RBP18.48■□□□□ 0.55
CDH20-203ENST00000538374 KAZALD1Q96I82 304 aa18.48■□□□□ 0.55
CDH20-203ENST00000538374 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDH20-203ENST00000538374 PDRG1Q9NUG6 133 aa18.48■□□□□ 0.55
CDH20-203ENST00000538374 SASH1O94885 1247 aa18.47■□□□□ 0.55
CDH20-203ENST00000538374 AOX1Q06278 1338 aa18.47■□□□□ 0.55
CDH20-203ENST00000538374 ME3Q16798 604 aa18.47■□□□□ 0.55
CDH20-203ENST00000538374 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
CDH20-203ENST00000538374 BICC1Q9H694 974 aaKnown RBP18.47■□□□□ 0.55
CDH20-203ENST00000538374 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
CDH20-203ENST00000538374 ALDH1L1O75891 902 aa18.47■□□□□ 0.55
CDH20-203ENST00000538374 KCNJ4P48050 445 aa18.47■□□□□ 0.55
CDH20-203ENST00000538374 TSC1Q92574 1164 aa18.47■□□□□ 0.55
CDH20-203ENST00000538374 GLRX3O76003 335 aaKnown RBP18.46■□□□□ 0.55
CDH20-203ENST00000538374 F13A1P00488 732 aa18.46■□□□□ 0.55
CDH20-203ENST00000538374 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
CDH20-203ENST00000538374 CABP4P57796 275 aa18.46■□□□□ 0.55
CDH20-203ENST00000538374 STK3Q13188 491 aa18.46■□□□□ 0.55
CDH20-203ENST00000538374 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.46■□□□□ 0.55
CDH20-203ENST00000538374 UTYO14607 1347 aa18.46■□□□□ 0.55
CDH20-203ENST00000538374 LRP6O75581 1613 aa18.46■□□□□ 0.55
CDH20-203ENST00000538374 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.54
CDH20-203ENST00000538374 ZNF500O60304 480 aaPredicted RBP18.46■□□□□ 0.54
CDH20-203ENST00000538374 NMIQ13287 307 aaPredicted RBP18.46■□□□□ 0.54
CDH20-203ENST00000538374 STRN4Q9NRL3 753 aa18.46■□□□□ 0.54
CDH20-203ENST00000538374 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms