RNA–Protein interactions for RNA: ENST00000538354.5

TULP3-203, Transcript of tubby like protein 3, humanhuman

TSL 1 (best)

Gene TULP3, Length 1,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-203ENST00000538354 C3orf67Q6ZVT6 689 aa25.51■■□□□ 1.67
TULP3-203ENST00000538354 LAS1LQ9Y4W2 734 aaKnown RBP25.51■■□□□ 1.67
TULP3-203ENST00000538354 ZNF541Q9H0D2 1346 aa25.5■■□□□ 1.67
TULP3-203ENST00000538354 TRIM35Q9UPQ4 493 aa25.5■■□□□ 1.67
TULP3-203ENST00000538354 RTKN2Q8IZC4 609 aa25.49■■□□□ 1.67
TULP3-203ENST00000538354 SYNE4Q8N205 404 aa25.49■■□□□ 1.67
TULP3-203ENST00000538354 RPGRQ92834 1020 aaKnown RBP25.49■■□□□ 1.67
TULP3-203ENST00000538354 IBTKQ9P2D0 1353 aaPredicted RBP25.48■■□□□ 1.67
TULP3-203ENST00000538354 TCERG1O14776 1098 aaKnown RBP25.48■■□□□ 1.67
TULP3-203ENST00000538354 AIMP1Q12904 312 aaKnown RBP25.48■■□□□ 1.67
TULP3-203ENST00000538354 BABAM1Q9NWV8 329 aa25.48■■□□□ 1.67
TULP3-203ENST00000538354 IFFO2Q5TF58 517 aa25.47■■□□□ 1.67
TULP3-203ENST00000538354 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
TULP3-203ENST00000538354 IARSP41252 1262 aaKnown RBP25.46■■□□□ 1.67
TULP3-203ENST00000538354 COPS6Q7L5N1 327 aa25.46■■□□□ 1.67
TULP3-203ENST00000538354 XAGE3Q8WTP9 111 aa25.46■■□□□ 1.67
TULP3-203ENST00000538354 ZNF428Q96B54 188 aa25.46■■□□□ 1.67
TULP3-203ENST00000538354 ANKRD36CQ5JPF3 1778 aa25.46■■□□□ 1.67
TULP3-203ENST00000538354 RIC1Q4ADV7 1423 aa25.46■■□□□ 1.67
TULP3-203ENST00000538354 CHL1O00533 1208 aa25.45■■□□□ 1.66
TULP3-203ENST00000538354 PPP1R42Q7Z4L9 355 aa25.45■■□□□ 1.66
TULP3-203ENST00000538354 APAF1O14727 1248 aa25.44■■□□□ 1.66
TULP3-203ENST00000538354 HOXA10P31260 410 aaPredicted RBP25.44■■□□□ 1.66
TULP3-203ENST00000538354 CHADLQ6NUI6 762 aa25.44■■□□□ 1.66
TULP3-203ENST00000538354 COL4A5P29400 1685 aa25.44■■□□□ 1.66
TULP3-203ENST00000538354 SCN4AP35499 1836 aa25.43■■□□□ 1.66
TULP3-203ENST00000538354 PARP10Q53GL7 1025 aa25.43■■□□□ 1.66
TULP3-203ENST00000538354 RBM17Q96I25 401 aaKnown RBP25.43■■□□□ 1.66
TULP3-203ENST00000538354 UTP14AQ9BVJ6 771 aaKnown RBP25.43■■□□□ 1.66
TULP3-203ENST00000538354 LAMB2P55268 1798 aa25.42■■□□□ 1.66
TULP3-203ENST00000538354 JMYQ8N9B5 988 aa25.42■■□□□ 1.66
TULP3-203ENST00000538354 L3MBTL3Q96JM7 780 aaPredicted RBP25.42■■□□□ 1.66
TULP3-203ENST00000538354 TAF1DQ9H5J8 278 aaPredicted RBP25.42■■□□□ 1.66
TULP3-203ENST00000538354 PPEF1O14829 653 aaPredicted RBP25.41■■□□□ 1.66
TULP3-203ENST00000538354 CRAMP1Q96RY5 1269 aa25.41■■□□□ 1.66
TULP3-203ENST00000538354 PSMD1Q99460 953 aa25.41■■□□□ 1.66
TULP3-203ENST00000538354 CHPF2Q9P2E5 772 aa25.41■■□□□ 1.66
TULP3-203ENST00000538354 IQCA1LA6NCM1 817 aa25.4■■□□□ 1.66
TULP3-203ENST00000538354 NLRP3Q96P20 1036 aa25.4■■□□□ 1.66
TULP3-203ENST00000538354 DDX21Q9NR30 783 aaKnown RBP eCLIP25.4■■□□□ 1.66
TULP3-203ENST00000538354 FZD9O00144 591 aa25.39■■□□□ 1.66
TULP3-203ENST00000538354 HCLS1P14317 486 aaPredicted RBP25.39■■□□□ 1.66
TULP3-203ENST00000538354 EAPPQ56P03 285 aaPredicted RBP25.39■■□□□ 1.66
TULP3-203ENST00000538354 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
TULP3-203ENST00000538354 HDGFL1Q5TGJ6 251 aa25.38■■□□□ 1.65
TULP3-203ENST00000538354 CC2D2BQ6DHV5 1058 aa25.38■■□□□ 1.65
TULP3-203ENST00000538354 NLRP10Q86W26 655 aa25.38■■□□□ 1.65
TULP3-203ENST00000538354 SLC10A5Q5PT55 438 aa25.37■■□□□ 1.65
TULP3-203ENST00000538354 JDP2Q8WYK2 163 aa25.37■■□□□ 1.65
TULP3-203ENST00000538354 HACL1Q9UJ83 578 aa25.37■■□□□ 1.65
TULP3-203ENST00000538354 ABCC4O15439 1325 aa25.37■■□□□ 1.65
TULP3-203ENST00000538354 TAF1P21675 1872 aa25.36■■□□□ 1.65
TULP3-203ENST00000538354 TCIRG1Q13488 830 aa25.36■■□□□ 1.65
TULP3-203ENST00000538354 HSP90AB3PQ58FF7 597 aa25.36■■□□□ 1.65
TULP3-203ENST00000538354 LDHDQ86WU2 507 aa25.36■■□□□ 1.65
TULP3-203ENST00000538354 GJA3Q9Y6H8 435 aa25.36■■□□□ 1.65
TULP3-203ENST00000538354 EPHX2P34913 555 aa25.35■■□□□ 1.65
TULP3-203ENST00000538354 NCBP3Q53F19 620 aaKnown RBP25.35■■□□□ 1.65
TULP3-203ENST00000538354 LARGE2Q8N3Y3 721 aa25.35■■□□□ 1.65
TULP3-203ENST00000538354 MBIPQ9NS73 344 aa25.35■■□□□ 1.65
TULP3-203ENST00000538354 TRMT112Q9UI30 125 aaKnown RBP25.35■■□□□ 1.65
TULP3-203ENST00000538354 DUSP27Q5VZP5 1158 aa25.34■■□□□ 1.65
TULP3-203ENST00000538354 CFAP44Q96MT7 982 aa25.34■■□□□ 1.65
TULP3-203ENST00000538354 CLEC11AQ9Y240 323 aa25.34■■□□□ 1.65
TULP3-203ENST00000538354 CALD1Q05682 793 aaKnown RBP25.33■■□□□ 1.65
TULP3-203ENST00000538354 LTBP1Q14766 1721 aa25.33■■□□□ 1.65
TULP3-203ENST00000538354 ADAMTSL1Q8N6G6 1762 aa25.33■■□□□ 1.65
TULP3-203ENST00000538354 CCER2I3L3R5 266 aa25.32■■□□□ 1.64
TULP3-203ENST00000538354 EIF6P56537 245 aaKnown RBP25.32■■□□□ 1.64
TULP3-203ENST00000538354 CCDC27Q2M243 656 aa25.32■■□□□ 1.64
TULP3-203ENST00000538354 GPC2Q8N158 579 aa25.32■■□□□ 1.64
TULP3-203ENST00000538354 MKRN1Q9UHC7 482 aaKnown RBP25.32■■□□□ 1.64
TULP3-203ENST00000538354 ATP6V0A2Q9Y487 856 aa25.32■■□□□ 1.64
TULP3-203ENST00000538354 PCNTO95613 3336 aa25.31■■□□□ 1.64
TULP3-203ENST00000538354 ATP5J2-PTCD1G3V325 749 aa25.31■■□□□ 1.64
TULP3-203ENST00000538354 AOC3Q16853 763 aa25.31■■□□□ 1.64
TULP3-203ENST00000538354 FAM9BQ8IZU0 186 aa25.31■■□□□ 1.64
TULP3-203ENST00000538354 CREBZFQ9NS37 354 aa25.31■■□□□ 1.64
TULP3-203ENST00000538354 DDX60Q8IY21 1712 aaKnown RBP25.31■■□□□ 1.64
TULP3-203ENST00000538354 SH3TC1Q8TE82 1336 aa25.31■■□□□ 1.64
TULP3-203ENST00000538354 PASKQ96RG2 1323 aa25.31■■□□□ 1.64
TULP3-203ENST00000538354 PPIP5K2O43314 1243 aa25.3■■□□□ 1.64
TULP3-203ENST00000538354 HOXB7P09629 217 aa25.3■■□□□ 1.64
TULP3-203ENST00000538354 DIEXFQ68CQ4 756 aaKnown RBP25.3■■□□□ 1.64
TULP3-203ENST00000538354 ANKRD13DQ6ZTN6 518 aa25.3■■□□□ 1.64
TULP3-203ENST00000538354 PLBD2Q8NHP8 589 aa25.3■■□□□ 1.64
TULP3-203ENST00000538354 DBF4Q9UBU7 674 aaPredicted RBP25.3■■□□□ 1.64
TULP3-203ENST00000538354 ELL2O00472 640 aaPredicted RBP25.29■■□□□ 1.64
TULP3-203ENST00000538354 ZNF853P0CG23 659 aa25.29■■□□□ 1.64
TULP3-203ENST00000538354 GRIPAP1Q4V328 841 aa25.29■■□□□ 1.64
TULP3-203ENST00000538354 COL13A1Q5TAT6 717 aaPredicted RBP25.29■■□□□ 1.64
TULP3-203ENST00000538354 MAP1SQ66K74 1059 aaPredicted RBP25.29■■□□□ 1.64
TULP3-203ENST00000538354 ITGBL1O95965 494 aaPredicted RBP25.28■■□□□ 1.64
TULP3-203ENST00000538354 HSPA1AP0DMV8 641 aaKnown RBP25.28■■□□□ 1.64
TULP3-203ENST00000538354 HSPA1BP0DMV9 641 aaKnown RBP25.28■■□□□ 1.64
TULP3-203ENST00000538354 NIM1KQ8IY84 436 aa25.28■■□□□ 1.64
TULP3-203ENST00000538354 TMX4Q9H1E5 349 aaPredicted RBP25.28■■□□□ 1.64
TULP3-203ENST00000538354 RTL5Q5HYW3 569 aaPredicted RBP25.27■■□□□ 1.64
TULP3-203ENST00000538354 DDX46Q7L014 1031 aaKnown RBP25.27■■□□□ 1.64
TULP3-203ENST00000538354 FAM89AQ96GI7 184 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms