RNA–Protein interactions for RNA: ENST00000538192.4

LRIT2-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

TSL 1 (best) BASIC

Gene LRIT2, Length 3,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-202ENST00000538192 CHGBP05060 677 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 IGKV5-2P06315 115 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 CDK11BP21127 795 aaKnown RBP13.26□□□□□ -0.29
LRIT2-202ENST00000538192 COL9A3Q14050 684 aaPredicted RBP13.26□□□□□ -0.29
LRIT2-202ENST00000538192 SMC3Q9UQE7 1217 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 NPHP4O75161 1426 aaPredicted RBP13.25□□□□□ -0.29
LRIT2-202ENST00000538192 RUFY3Q7L099 469 aa13.25□□□□□ -0.29
LRIT2-202ENST00000538192 TSC1Q92574 1164 aa13.25□□□□□ -0.29
LRIT2-202ENST00000538192 CNPY2Q9Y2B0 182 aa13.25□□□□□ -0.29
LRIT2-202ENST00000538192 LRRC37A3O60309 1634 aa13.25□□□□□ -0.29
LRIT2-202ENST00000538192 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
LRIT2-202ENST00000538192 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
LRIT2-202ENST00000538192 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
LRIT2-202ENST00000538192 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
LRIT2-202ENST00000538192 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 PLCB2Q00722 1185 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 STK3Q13188 491 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 CUL4AQ13619 759 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 USP48Q86UV5 1035 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 C19orf44Q9H6X5 657 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 PDRG1Q9NUG6 133 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 SLC52A2Q9HAB3 445 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 CGNQ9P2M7 1197 aaKnown RBP13.24□□□□□ -0.29
LRIT2-202ENST00000538192 AOX1Q06278 1338 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 HSPA2P54652 639 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 PDIA6Q15084 440 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
LRIT2-202ENST00000538192 NPHP3Q7Z494 1330 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 CCDC173Q0VFZ6 552 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
LRIT2-202ENST00000538192 LIMCH1Q9UPQ0 1083 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 PHKG2P15735 406 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 CABP4P57796 275 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
LRIT2-202ENST00000538192 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
LRIT2-202ENST00000538192 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
LRIT2-202ENST00000538192 A0A0D9SFI3 127 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 ZKSCAN1P17029 563 aaPredicted RBP13.22□□□□□ -0.29
LRIT2-202ENST00000538192 TTC41PQ6P2S7 1318 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
LRIT2-202ENST00000538192 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 SYT1P21579 422 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 ZNF445P59923 1031 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
LRIT2-202ENST00000538192 CYP46A1Q9Y6A2 500 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 TAF6LQ9Y6J9 622 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 A0A087WZG4 1122 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 GCKRQ14397 625 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 IFNL2Q8IZJ0 200 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 INTS4Q96HW7 963 aaKnown RBP13.22□□□□□ -0.29
LRIT2-202ENST00000538192 NEUROD6Q96NK8 337 aa13.22□□□□□ -0.29
LRIT2-202ENST00000538192 GJB2P29033 226 aa13.21□□□□□ -0.29
LRIT2-202ENST00000538192 DNTTIP2Q5QJE6 756 aaKnown RBP13.21□□□□□ -0.29
LRIT2-202ENST00000538192 CACNA1FO60840 1977 aa13.21□□□□□ -0.29
LRIT2-202ENST00000538192 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
LRIT2-202ENST00000538192 CYP27B1O15528 508 aa13.21□□□□□ -0.3
LRIT2-202ENST00000538192 STX6O43752 255 aa13.21□□□□□ -0.3
LRIT2-202ENST00000538192 FOSBP53539 338 aa13.21□□□□□ -0.3
LRIT2-202ENST00000538192 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.3
LRIT2-202ENST00000538192 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.3
LRIT2-202ENST00000538192 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.3
LRIT2-202ENST00000538192 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 TFCP2Q12800 502 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 SLFNL1Q499Z3 407 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 MTERF4Q7Z6M4 381 aaKnown RBP13.2□□□□□ -0.3
LRIT2-202ENST00000538192 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 MBD3O95983 291 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 PTMAP06454 111 aaKnown RBP13.2□□□□□ -0.3
LRIT2-202ENST00000538192 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
LRIT2-202ENST00000538192 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 MTX1Q13505 466 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 ZNF589Q86UQ0 364 aaPredicted RBP13.2□□□□□ -0.3
LRIT2-202ENST00000538192 TTC14Q96N46 770 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 ZBTB3Q9H5J0 574 aa13.2□□□□□ -0.3
LRIT2-202ENST00000538192 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
LRIT2-202ENST00000538192 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
LRIT2-202ENST00000538192 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
LRIT2-202ENST00000538192 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
LRIT2-202ENST00000538192 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
LRIT2-202ENST00000538192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
LRIT2-202ENST00000538192 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
LRIT2-202ENST00000538192 DYNC1I1O14576 645 aa13.19□□□□□ -0.3
LRIT2-202ENST00000538192 DNM1Q05193 864 aaKnown RBP13.19□□□□□ -0.3
LRIT2-202ENST00000538192 ME3Q16798 604 aa13.19□□□□□ -0.3
LRIT2-202ENST00000538192 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
LRIT2-202ENST00000538192 ZSCAN22P10073 491 aaPredicted RBP13.18□□□□□ -0.3
LRIT2-202ENST00000538192 CERS3Q8IU89 383 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 ZFP91Q96JP5 570 aaPredicted RBP13.18□□□□□ -0.3
LRIT2-202ENST00000538192 METTL22Q9BUU2 404 aaPredicted RBP13.18□□□□□ -0.3
LRIT2-202ENST00000538192 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 A0A0G2JS52 829 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms