RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 KIF15Q9NS87 1388 aa11.79□□□□□ -0.52
LMO3-216ENST00000537568 ADH1CP00326 375 aa11.79□□□□□ -0.52
LMO3-216ENST00000537568 SH3RF1Q7Z6J0 888 aa11.79□□□□□ -0.52
LMO3-216ENST00000537568 TRIM46Q7Z4K8 759 aa11.78□□□□□ -0.52
LMO3-216ENST00000537568 CALR3Q96L12 384 aaKnown RBP11.78□□□□□ -0.52
LMO3-216ENST00000537568 SPATA31A5Q5VU36 1347 aa11.78□□□□□ -0.52
LMO3-216ENST00000537568 SPATA31A7Q8IWB4 1347 aa11.78□□□□□ -0.52
LMO3-216ENST00000537568 KANK1Q14678 1352 aa11.78□□□□□ -0.52
LMO3-216ENST00000537568 ROBO2Q9HCK4 1378 aa11.78□□□□□ -0.52
LMO3-216ENST00000537568 GPR162Q16538 588 aa11.77□□□□□ -0.53
LMO3-216ENST00000537568 ESCO1Q5FWF5 840 aa11.77□□□□□ -0.53
LMO3-216ENST00000537568 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
LMO3-216ENST00000537568 CROCC2H7BZ55 1655 aa11.77□□□□□ -0.53
LMO3-216ENST00000537568 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
LMO3-216ENST00000537568 C1QTNF2Q9BXJ5 285 aa11.76□□□□□ -0.53
LMO3-216ENST00000537568 MAGEB6P1A0A0J9YX57 407 aa11.75□□□□□ -0.53
LMO3-216ENST00000537568 LOC105371045A0A1W2PR82 267 aa11.75□□□□□ -0.53
LMO3-216ENST00000537568 TIMP2P16035 220 aa11.75□□□□□ -0.53
LMO3-216ENST00000537568 JMYQ8N9B5 988 aa11.75□□□□□ -0.53
LMO3-216ENST00000537568 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
LMO3-216ENST00000537568 AP1G2O75843 785 aa11.74□□□□□ -0.53
LMO3-216ENST00000537568 GRM5P41594 1212 aa11.74□□□□□ -0.53
LMO3-216ENST00000537568 WDR4P57081 412 aaKnown RBP11.74□□□□□ -0.53
LMO3-216ENST00000537568 PRM3Q9NNZ6 103 aa11.74□□□□□ -0.53
LMO3-216ENST00000537568 RRP7BPQ9NSQ0 103 aa11.74□□□□□ -0.53
LMO3-216ENST00000537568 POM121CA8CG34 1229 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 ABCC5O15440 1437 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 ADCY9O60503 1353 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 NR3C2P08235 984 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 NR6A1Q15406 480 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 LCE2AQ5TA79 106 aaPredicted RBP11.73□□□□□ -0.53
LMO3-216ENST00000537568 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
LMO3-216ENST00000537568 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
LMO3-216ENST00000537568 BTG4Q9NY30 223 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
LMO3-216ENST00000537568 GLMNQ92990 594 aa11.72□□□□□ -0.53
LMO3-216ENST00000537568 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
LMO3-216ENST00000537568 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
LMO3-216ENST00000537568 NR5A1Q13285 461 aa11.71□□□□□ -0.53
LMO3-216ENST00000537568 IRF5Q13568 498 aa11.71□□□□□ -0.53
LMO3-216ENST00000537568 FKBPLQ9UIM3 349 aa11.71□□□□□ -0.53
LMO3-216ENST00000537568 ACIN1Q9UKV3 1341 aaKnown RBP11.7□□□□□ -0.54
LMO3-216ENST00000537568 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
LMO3-216ENST00000537568 TRMT44Q8IYL2 757 aaKnown RBP11.7□□□□□ -0.54
LMO3-216ENST00000537568 MTFR1LQ9H019 292 aa11.7□□□□□ -0.54
LMO3-216ENST00000537568 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
LMO3-216ENST00000537568 ZIC2O95409 532 aaPredicted RBP11.69□□□□□ -0.54
LMO3-216ENST00000537568 FSHRP23945 695 aa11.69□□□□□ -0.54
LMO3-216ENST00000537568 ITPKCQ96DU7 683 aa11.69□□□□□ -0.54
LMO3-216ENST00000537568 ZFAND3Q9H8U3 227 aa11.69□□□□□ -0.54
LMO3-216ENST00000537568 MAP4K5Q9Y4K4 846 aa11.69□□□□□ -0.54
LMO3-216ENST00000537568 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
LMO3-216ENST00000537568 PRAG1Q86YV5 1406 aa11.69□□□□□ -0.54
LMO3-216ENST00000537568 LRPPRCP42704 1394 aaKnown RBP11.68□□□□□ -0.54
LMO3-216ENST00000537568 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
LMO3-216ENST00000537568 HTRA3P83110 453 aa11.68□□□□□ -0.54
LMO3-216ENST00000537568 NFX1Q12986 1120 aaKnown RBP11.68□□□□□ -0.54
LMO3-216ENST00000537568 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
LMO3-216ENST00000537568 MRPL14Q6P1L8 145 aaKnown RBP11.68□□□□□ -0.54
LMO3-216ENST00000537568 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
LMO3-216ENST00000537568 VASH1Q7L8A9 365 aaPredicted RBP11.68□□□□□ -0.54
LMO3-216ENST00000537568 EPS8L1Q8TE68 723 aa11.68□□□□□ -0.54
LMO3-216ENST00000537568 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
LMO3-216ENST00000537568 KLRG1Q96E93 195 aa11.68□□□□□ -0.54
LMO3-216ENST00000537568 ZFP42Q96MM3 310 aa11.68□□□□□ -0.54
LMO3-216ENST00000537568 GZF1Q9H116 711 aaPredicted RBP11.68□□□□□ -0.54
LMO3-216ENST00000537568 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
LMO3-216ENST00000537568 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
LMO3-216ENST00000537568 SPATA31A1Q5TZJ5 1347 aa11.67□□□□□ -0.54
LMO3-216ENST00000537568 WFS1O76024 890 aa11.67□□□□□ -0.54
LMO3-216ENST00000537568 TMCO4Q5TGY1 634 aa11.67□□□□□ -0.54
LMO3-216ENST00000537568 PTF1AQ7RTS3 328 aa11.67□□□□□ -0.54
LMO3-216ENST00000537568 PLSCR1O15162 318 aa11.66□□□□□ -0.54
LMO3-216ENST00000537568 KRT28Q7Z3Y7 464 aa11.66□□□□□ -0.54
LMO3-216ENST00000537568 ARHGAP9Q9BRR9 750 aa11.66□□□□□ -0.54
LMO3-216ENST00000537568 CCDC144AA2RUR9 1427 aa11.66□□□□□ -0.54
LMO3-216ENST00000537568 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
LMO3-216ENST00000537568 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
LMO3-216ENST00000537568 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
LMO3-216ENST00000537568 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
LMO3-216ENST00000537568 NLGN2Q8NFZ4 835 aa11.65□□□□□ -0.54
LMO3-216ENST00000537568 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
LMO3-216ENST00000537568 PPARGC1BQ86YN6 1023 aaKnown RBP11.64□□□□□ -0.55
LMO3-216ENST00000537568 OCSTAMPQ9BR26 566 aa11.64□□□□□ -0.55
LMO3-216ENST00000537568 TECPR2O15040 1411 aa11.63□□□□□ -0.55
LMO3-216ENST00000537568 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
LMO3-216ENST00000537568 SCARF1Q14162 830 aa11.63□□□□□ -0.55
LMO3-216ENST00000537568 COL14A1Q05707 1796 aaKnown RBP11.62□□□□□ -0.55
LMO3-216ENST00000537568 IQGAP3Q86VI3 1631 aa11.62□□□□□ -0.55
LMO3-216ENST00000537568 HFM1A2PYH4 1435 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 WDR90Q96KV7 1748 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 RFX1P22670 979 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 PDE4CQ08493 712 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 SLC15A2Q16348 729 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 LCE2CQ5TA81 110 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 HDGFL1Q5TGJ6 251 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 ZBTB33Q86T24 672 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms