RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-208	ENST00000537120	LTBP3	Q9NS15	1303 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	BCOR	Q6W2J9	1755 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	KDM3B	Q7LBC6	1761 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	DLEC1	Q9Y238	1755 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	DDN	O94850	711 aa	Predicted RBP	10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	PDIA6	Q15084	440 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	KRT24	Q2M2I5	525 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	PROSER3	Q2NL68	480 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	CC2D2B	Q6DHV5	1058 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	C7orf43	Q8WVR3	580 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	JDP2	Q8WYK2	163 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	CFAP44	Q96MT7	982 aa		10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	TRMT112	Q9UI30	125 aa	Known RBP	10.88	□□□□□ -0.67
DDB1-208	ENST00000537120	CACNA1S	Q13698	1873 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	NUP98	P52948	1817 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	GNAI1	P63096	354 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	TCIRG1	Q13488	830 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	DUSP27	Q5VZP5	1158 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	OLFM4	Q6UX06	510 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	CHPF2	Q9P2E5	772 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	DBF4	Q9UBU7	674 aa	Predicted RBP	10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	CLEC11A	Q9Y240	323 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	LAMB4	A4D0S4	1761 aa		10.87	□□□□□ -0.67
DDB1-208	ENST00000537120	UBN2	Q6ZU65	1347 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	IQCA1L	A6NCM1	817 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	ELL2	O00472	640 aa	Predicted RBP	10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	NTSR2	O95665	410 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	IARS	P41252	1262 aa	Known RBP	10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	GRIPAP1	Q4V328	841 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	ANKRD13D	Q6ZTN6	518 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	ZNF428	Q96B54	188 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	CRAMP1	Q96RY5	1269 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	CHMP4A	Q9BY43	222 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	HYPK	Q9NX55	129 aa		10.86	□□□□□ -0.67
DDB1-208	ENST00000537120	COL11A2	P13942	1736 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	PPEF1	O14829	653 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	ANP32C	O43423	234 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	HOXB7	P09629	217 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	HCLS1	P14317	486 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	HOXA10	P31260	410 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	EIF6	P56537	245 aa	Known RBP	10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	HTRA3	P83110	453 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	CRY2	Q49AN0	593 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	SLC10A5	Q5PT55	438 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	DDX46	Q7L014	1031 aa	Known RBP	10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	RIC3	Q7Z5B4	369 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	NLRP10	Q86W26	655 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	LARGE2	Q8N3Y3	721 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	PLBD2	Q8NHP8	589 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	MBIP	Q9NS73	344 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	GJA3	Q9Y6H8	435 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	FER1L6	Q2WGJ9	1857 aa		10.85	□□□□□ -0.67
DDB1-208	ENST00000537120	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	POTEC	B2RU33	542 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	ATP5J2-PTCD1	G3V325	749 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	BBOX1	O75936	387 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	GOLGA2	Q08379	1002 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	EAPP	Q56P03	285 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	CHADL	Q6NUI6	762 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	IFT57	Q9NWB7	429 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	ABCC12	Q96J65	1359 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	SH3TC1	Q8TE82	1336 aa		10.84	□□□□□ -0.67
DDB1-208	ENST00000537120	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	C3orf67	Q6ZVT6	689 aa		10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	LRP10	Q7Z4F1	713 aa		10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	DNAJC5G	Q8N7S2	189 aa		10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	PSMD1	Q99460	953 aa		10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	FOXD4L1	Q9NU39	408 aa		10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	HACL1	Q9UJ83	578 aa		10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	RNF123	Q5XPI4	1314 aa		10.83	□□□□□ -0.68
DDB1-208	ENST00000537120	DICER1	Q9UPY3	1922 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-208	ENST00000537120	LMOD1	P29536	600 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-208	ENST00000537120	RTL5	Q5HYW3	569 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-208	ENST00000537120	NIM1K	Q8IY84	436 aa		10.82	□□□□□ -0.68
DDB1-208	ENST00000537120	SUPT20H	Q8NEM7	779 aa		10.82	□□□□□ -0.68
DDB1-208	ENST00000537120	MRS2	Q9HD23	443 aa		10.82	□□□□□ -0.68
DDB1-208	ENST00000537120	ATP6V0A2	Q9Y487	856 aa		10.82	□□□□□ -0.68
DDB1-208	ENST00000537120	TIAM2	Q8IVF5	1701 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	PPIP5K2	O43314	1243 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	DDX58	O95786	925 aa	Known RBP	10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	ZNF853	P0CG23	659 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	HSP90B1	P14625	803 aa	Known RBP	10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	CCDC30	Q5VVM6	783 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	DPP8	Q6V1X1	898 aa	Predicted RBP	10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	SP8	Q8IXZ3	490 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	GPC2	Q8N158	579 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	MPND	Q8N594	471 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	KLRG1	Q96E93	195 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	FAM89A	Q96GI7	184 aa		10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	SALL2	Q9Y467	1007 aa	Predicted RBP	10.81	□□□□□ -0.68
DDB1-208	ENST00000537120	FZD9	O00144	591 aa		10.8	□□□□□ -0.68
DDB1-208	ENST00000537120	EPHX2	P34913	555 aa		10.8	□□□□□ -0.68
DDB1-208	ENST00000537120	CCDC184	Q52MB2	194 aa		10.8	□□□□□ -0.68
DDB1-208	ENST00000537120	PNMA8A	Q86V59	439 aa	Predicted RBP	10.8	□□□□□ -0.68
DDB1-208	ENST00000537120	LDHD	Q86WU2	507 aa		10.8	□□□□□ -0.68
DDB1-208	ENST00000537120	C8orf58	Q8NAV2	365 aa		10.8	□□□□□ -0.68
DDB1-208	ENST00000537120	STK31	Q9BXU1	1019 aa		10.8	□□□□□ -0.68
DDB1-208	ENST00000537120	ABCC4	O15439	1325 aa		10.8	□□□□□ -0.68

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