RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TNRC6CQ9HCJ0 1690 aaKnown RBP18.45■□□□□ 0.54
UBE3B-206ENST00000536398 ATP5J2-PTCD1G3V325 749 aa18.45■□□□□ 0.54
UBE3B-206ENST00000536398 HSP90AB3PQ58FF7 597 aa18.45■□□□□ 0.54
UBE3B-206ENST00000536398 C7orf43Q8WVR3 580 aa18.45■□□□□ 0.54
UBE3B-206ENST00000536398 IL16Q14005 1332 aa18.45■□□□□ 0.54
UBE3B-206ENST00000536398 CRY2Q49AN0 593 aa18.44■□□□□ 0.54
UBE3B-206ENST00000536398 WDR63Q8IWG1 891 aa18.44■□□□□ 0.54
UBE3B-206ENST00000536398 SLC10A5Q5PT55 438 aa18.43■□□□□ 0.54
UBE3B-206ENST00000536398 CCDC30Q5VVM6 783 aa18.43■□□□□ 0.54
UBE3B-206ENST00000536398 SLC51AQ86UW1 340 aa18.43■□□□□ 0.54
UBE3B-206ENST00000536398 ISCA1Q9BUE6 129 aa18.43■□□□□ 0.54
UBE3B-206ENST00000536398 FANCIQ9NVI1 1328 aa18.43■□□□□ 0.54
UBE3B-206ENST00000536398 HCLS1P14317 486 aaPredicted RBP18.42■□□□□ 0.54
UBE3B-206ENST00000536398 LMNB1P20700 586 aa18.42■□□□□ 0.54
UBE3B-206ENST00000536398 TWISTNBQ3B726 338 aaPredicted RBP18.42■□□□□ 0.54
UBE3B-206ENST00000536398 TRMT112Q9UI30 125 aaKnown RBP18.42■□□□□ 0.54
UBE3B-206ENST00000536398 SBF1O95248 1867 aa18.41■□□□□ 0.54
UBE3B-206ENST00000536398 C1QTNF8P60827 252 aa18.41■□□□□ 0.54
UBE3B-206ENST00000536398 RIC3Q7Z5B4 369 aa18.41■□□□□ 0.54
UBE3B-206ENST00000536398 CACNA1SQ13698 1873 aa18.4■□□□□ 0.54
UBE3B-206ENST00000536398 KIF3CO14782 793 aa18.4■□□□□ 0.54
UBE3B-206ENST00000536398 ALDH1B1P30837 517 aa18.4■□□□□ 0.54
UBE3B-206ENST00000536398 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
UBE3B-206ENST00000536398 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
UBE3B-206ENST00000536398 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
UBE3B-206ENST00000536398 G2E3Q7L622 706 aa18.4■□□□□ 0.54
UBE3B-206ENST00000536398 RPGRQ92834 1020 aaKnown RBP18.4■□□□□ 0.54
UBE3B-206ENST00000536398 NLRP3Q96P20 1036 aa18.4■□□□□ 0.54
UBE3B-206ENST00000536398 NMRK2Q9NPI5 230 aa18.4■□□□□ 0.54
UBE3B-206ENST00000536398 FAM89AQ96GI7 184 aa18.39■□□□□ 0.53
UBE3B-206ENST00000536398 TAOK3Q9H2K8 898 aa18.39■□□□□ 0.53
UBE3B-206ENST00000536398 SH3TC1Q8TE82 1336 aa18.39■□□□□ 0.53
UBE3B-206ENST00000536398 RIC1Q4ADV7 1423 aa18.39■□□□□ 0.53
UBE3B-206ENST00000536398 VAMP4O75379 141 aa18.38■□□□□ 0.53
UBE3B-206ENST00000536398 CCDC93Q567U6 631 aa18.38■□□□□ 0.53
UBE3B-206ENST00000536398 RTL5Q5HYW3 569 aaPredicted RBP18.38■□□□□ 0.53
UBE3B-206ENST00000536398 RBM17Q96I25 401 aaKnown RBP18.38■□□□□ 0.53
UBE3B-206ENST00000536398 MYD88Q99836 296 aa18.38■□□□□ 0.53
UBE3B-206ENST00000536398 ANKRD36CQ5JPF3 1778 aa18.37■□□□□ 0.53
UBE3B-206ENST00000536398 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
UBE3B-206ENST00000536398 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
UBE3B-206ENST00000536398 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
UBE3B-206ENST00000536398 ARFGEF2Q9Y6D5 1785 aa18.37■□□□□ 0.53
UBE3B-206ENST00000536398 FER1L6Q2WGJ9 1857 aa18.37■□□□□ 0.53
UBE3B-206ENST00000536398 TRIM28Q13263 835 aaKnown RBP18.36■□□□□ 0.53
UBE3B-206ENST00000536398 RNF123Q5XPI4 1314 aa18.36■□□□□ 0.53
UBE3B-206ENST00000536398 JARID2Q92833 1246 aaPredicted RBP18.36■□□□□ 0.53
UBE3B-206ENST00000536398 ZNF521Q96K83 1311 aa18.36■□□□□ 0.53
UBE3B-206ENST00000536398 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
UBE3B-206ENST00000536398 ZNF277Q9NRM2 450 aaPredicted RBP18.36■□□□□ 0.53
UBE3B-206ENST00000536398 LTBP3Q9NS15 1303 aa18.36■□□□□ 0.53
UBE3B-206ENST00000536398 MAP3K2Q9Y2U5 619 aa18.36■□□□□ 0.53
UBE3B-206ENST00000536398 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
UBE3B-206ENST00000536398 RRAGCQ9HB90 399 aa18.35■□□□□ 0.53
UBE3B-206ENST00000536398 ABCC4O15439 1325 aa18.34■□□□□ 0.53
UBE3B-206ENST00000536398 PI4KAP2A4QPH2 592 aa18.34■□□□□ 0.53
UBE3B-206ENST00000536398 CCER2I3L3R5 266 aa18.34■□□□□ 0.53
UBE3B-206ENST00000536398 PPEF1O14829 653 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-206ENST00000536398 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
UBE3B-206ENST00000536398 FKBP4Q02790 459 aaKnown RBP eCLIP18.34■□□□□ 0.53
UBE3B-206ENST00000536398 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
UBE3B-206ENST00000536398 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
UBE3B-206ENST00000536398 PI4KAP1Q8N8J0 262 aa18.34■□□□□ 0.53
UBE3B-206ENST00000536398 METTL22Q9BUU2 404 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-206ENST00000536398 CCDC88AQ3V6T2 1871 aa18.34■□□□□ 0.53
UBE3B-206ENST00000536398 SNED1Q8TER0 1413 aa18.33■□□□□ 0.53
UBE3B-206ENST00000536398 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
UBE3B-206ENST00000536398 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
UBE3B-206ENST00000536398 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
UBE3B-206ENST00000536398 IRS4O14654 1257 aaPredicted RBP18.32■□□□□ 0.52
UBE3B-206ENST00000536398 IGKV5-2P06315 115 aa18.32■□□□□ 0.52
UBE3B-206ENST00000536398 MYH16Q9H6N6 1097 aa18.32■□□□□ 0.52
UBE3B-206ENST00000536398 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
UBE3B-206ENST00000536398 CCDC191Q8NCU4 936 aa18.31■□□□□ 0.52
UBE3B-206ENST00000536398 FLIIQ13045 1269 aa18.3■□□□□ 0.52
UBE3B-206ENST00000536398 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
UBE3B-206ENST00000536398 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
UBE3B-206ENST00000536398 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
UBE3B-206ENST00000536398 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
UBE3B-206ENST00000536398 LAMB2P55268 1798 aa18.3■□□□□ 0.52
UBE3B-206ENST00000536398 POTECB2RU33 542 aa18.29■□□□□ 0.52
UBE3B-206ENST00000536398 GRAPQ13588 217 aa18.29■□□□□ 0.52
UBE3B-206ENST00000536398 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
UBE3B-206ENST00000536398 CC2D2BQ6DHV5 1058 aa18.29■□□□□ 0.52
UBE3B-206ENST00000536398 MIER1Q8N108 512 aa18.29■□□□□ 0.52
UBE3B-206ENST00000536398 GRAPLQ8TC17 118 aaPredicted RBP18.29■□□□□ 0.52
UBE3B-206ENST00000536398 PSMD1Q99460 953 aa18.29■□□□□ 0.52
UBE3B-206ENST00000536398 TIAM2Q8IVF5 1701 aa18.29■□□□□ 0.52
UBE3B-206ENST00000536398 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
UBE3B-206ENST00000536398 BBOX1O75936 387 aa18.28■□□□□ 0.52
UBE3B-206ENST00000536398 DDNO94850 711 aaPredicted RBP18.28■□□□□ 0.52
UBE3B-206ENST00000536398 PCCAP05165 728 aaPredicted RBP18.28■□□□□ 0.52
UBE3B-206ENST00000536398 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
UBE3B-206ENST00000536398 FKBP5Q13451 457 aaPredicted RBP18.28■□□□□ 0.52
UBE3B-206ENST00000536398 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
UBE3B-206ENST00000536398 CELF1Q92879 486 aaKnown RBP18.28■□□□□ 0.52
UBE3B-206ENST00000536398 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
UBE3B-206ENST00000536398 TAF1P21675 1872 aa18.27■□□□□ 0.52
UBE3B-206ENST00000536398 DPY19L2Q6NUT2 758 aa18.27■□□□□ 0.52
UBE3B-206ENST00000536398 COL4A1P02462 1669 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms