RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 PRDM6Q9NQX0 595 aa10.59□□□□□ -0.71
CPSF7-214ENST00000535222 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
CPSF7-214ENST00000535222 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.71
CPSF7-214ENST00000535222 ROCK2O75116 1388 aaKnown RBP10.58□□□□□ -0.72
CPSF7-214ENST00000535222 EN2P19622 333 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-214ENST00000535222 ST5P78524 1137 aa10.58□□□□□ -0.72
CPSF7-214ENST00000535222 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
CPSF7-214ENST00000535222 C2orf69Q8N8R5 385 aa10.58□□□□□ -0.72
CPSF7-214ENST00000535222 ST20-MTHFSA0A0A6YYL1 179 aa10.57□□□□□ -0.72
CPSF7-214ENST00000535222 ALDH1B1P30837 517 aa10.57□□□□□ -0.72
CPSF7-214ENST00000535222 MTHFSP49914 203 aa10.57□□□□□ -0.72
CPSF7-214ENST00000535222 AMOTQ4VCS5 1084 aa10.57□□□□□ -0.72
CPSF7-214ENST00000535222 SETDB2Q96T68 719 aa10.57□□□□□ -0.72
CPSF7-214ENST00000535222 VPS33BQ9H267 617 aa10.57□□□□□ -0.72
CPSF7-214ENST00000535222 PAPPA2Q9BXP8 1791 aa10.57□□□□□ -0.72
CPSF7-214ENST00000535222 TBC1D8O95759 1140 aa10.56□□□□□ -0.72
CPSF7-214ENST00000535222 TM4SF4P48230 202 aa10.56□□□□□ -0.72
CPSF7-214ENST00000535222 PLEKHO1Q53GL0 409 aaPredicted RBP10.56□□□□□ -0.72
CPSF7-214ENST00000535222 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
CPSF7-214ENST00000535222 USP48Q86UV5 1035 aa10.56□□□□□ -0.72
CPSF7-214ENST00000535222 ARMC5Q96C12 935 aa10.56□□□□□ -0.72
CPSF7-214ENST00000535222 A0A1W2PPC1 479 aa10.55□□□□□ -0.72
CPSF7-214ENST00000535222 FKTNO75072 461 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 CXCL9Q07325 125 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 RASAL3Q86YV0 1011 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 L3MBTL2Q969R5 705 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 ANKRD26Q9UPS8 1709 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 ERBB4Q15303 1308 aa10.54□□□□□ -0.72
CPSF7-214ENST00000535222 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
CPSF7-214ENST00000535222 CANXP27824 592 aaKnown RBP10.53□□□□□ -0.72
CPSF7-214ENST00000535222 GMPSP49915 693 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-214ENST00000535222 ZNF530Q6P9A1 599 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-214ENST00000535222 TRPM4Q8TD43 1214 aa10.53□□□□□ -0.72
CPSF7-214ENST00000535222 STXBP5LQ9Y2K9 1186 aa10.53□□□□□ -0.72
CPSF7-214ENST00000535222 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
CPSF7-214ENST00000535222 CAMTA2O94983 1202 aa10.52□□□□□ -0.73
CPSF7-214ENST00000535222 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-214ENST00000535222 CRY2Q49AN0 593 aa10.52□□□□□ -0.73
CPSF7-214ENST00000535222 CLEC4GQ6UXB4 293 aa10.52□□□□□ -0.73
CPSF7-214ENST00000535222 SLC52A2Q9HAB3 445 aa10.52□□□□□ -0.73
CPSF7-214ENST00000535222 TBC1D2BQ9UPU7 963 aa10.52□□□□□ -0.73
CPSF7-214ENST00000535222 MRC1P22897 1456 aa10.51□□□□□ -0.73
CPSF7-214ENST00000535222 SOX1O00570 391 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-214ENST00000535222 EIF4A2Q14240 407 aaKnown RBP10.51□□□□□ -0.73
CPSF7-214ENST00000535222 ANKRD13DQ6ZTN6 518 aa10.51□□□□□ -0.73
CPSF7-214ENST00000535222 OTOP1Q7RTM1 612 aa10.51□□□□□ -0.73
CPSF7-214ENST00000535222 NIM1KQ8IY84 436 aa10.51□□□□□ -0.73
CPSF7-214ENST00000535222 ZNRF3Q9ULT6 936 aa10.51□□□□□ -0.73
CPSF7-214ENST00000535222 PTPN22Q9Y2R2 807 aa10.51□□□□□ -0.73
CPSF7-214ENST00000535222 PRUNE2Q8WUY3 3088 aa10.51□□□□□ -0.73
CPSF7-214ENST00000535222 EYSQ5T1H1 3165 aa10.5□□□□□ -0.73
CPSF7-214ENST00000535222 RGL2O15211 777 aa10.5□□□□□ -0.73
CPSF7-214ENST00000535222 STARD3NLO95772 234 aa10.5□□□□□ -0.73
CPSF7-214ENST00000535222 FKBP1BP68106 108 aa10.5□□□□□ -0.73
CPSF7-214ENST00000535222 KRT26Q7Z3Y9 468 aa10.5□□□□□ -0.73
CPSF7-214ENST00000535222 POLR2AP24928 1970 aaKnown RBP10.5□□□□□ -0.73
CPSF7-214ENST00000535222 PIEZO1Q92508 2521 aa10.49□□□□□ -0.73
CPSF7-214ENST00000535222 NPHP1O15259 732 aa10.49□□□□□ -0.73
CPSF7-214ENST00000535222 HOXA10P31260 410 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-214ENST00000535222 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
CPSF7-214ENST00000535222 NBPF5PQ86XG9 351 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-214ENST00000535222 DPF2Q92785 391 aa10.49□□□□□ -0.73
CPSF7-214ENST00000535222 TESK2Q96S53 571 aa10.49□□□□□ -0.73
CPSF7-214ENST00000535222 R3HDMLQ9H3Y0 253 aa10.49□□□□□ -0.73
CPSF7-214ENST00000535222 CNOT7Q9UIV1 285 aaKnown RBP10.49□□□□□ -0.73
CPSF7-214ENST00000535222 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 COL9A1P20849 921 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 HOXD11P31277 338 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-214ENST00000535222 SLC39A6Q13433 755 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 TNIP1Q15025 636 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 C1orf141Q5JVX7 400 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 ZNF333Q96JL9 665 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 RTFDC1Q9BY42 306 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-214ENST00000535222 POLKQ9UBT6 870 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 TRIM17Q9Y577 477 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
CPSF7-214ENST00000535222 LAMA2P24043 3122 aaKnown RBP10.48□□□□□ -0.73
CPSF7-214ENST00000535222 H7C1D1 291 aa10.47□□□□□ -0.73
CPSF7-214ENST00000535222 PPM1GO15355 546 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-214ENST00000535222 PLA2G5P39877 138 aa10.47□□□□□ -0.73
CPSF7-214ENST00000535222 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.47□□□□□ -0.73
CPSF7-214ENST00000535222 MPNDQ8N594 471 aa10.47□□□□□ -0.73
CPSF7-214ENST00000535222 LRCH3Q96II8 777 aa10.47□□□□□ -0.73
CPSF7-214ENST00000535222 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
CPSF7-214ENST00000535222 SHTN1A0MZ66 631 aa10.46□□□□□ -0.73
CPSF7-214ENST00000535222 ADM5C9JUS6 153 aa10.46□□□□□ -0.73
CPSF7-214ENST00000535222 PPIP5K2O43314 1243 aa10.46□□□□□ -0.73
CPSF7-214ENST00000535222 TEX13AQ9BXU3 409 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-214ENST00000535222 AOC3Q16853 763 aa10.45□□□□□ -0.74
CPSF7-214ENST00000535222 MICALL2Q8IY33 904 aa10.45□□□□□ -0.74
CPSF7-214ENST00000535222 DCPSQ96C86 337 aaKnown RBP10.45□□□□□ -0.74
CPSF7-214ENST00000535222 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
CPSF7-214ENST00000535222 ALDH1A1P00352 501 aa10.44□□□□□ -0.74
CPSF7-214ENST00000535222 DEFB123Q8N688 67 aa10.44□□□□□ -0.74
CPSF7-214ENST00000535222 CRAMP1Q96RY5 1269 aa10.44□□□□□ -0.74
CPSF7-214ENST00000535222 BCL2L13Q9BXK5 485 aa10.44□□□□□ -0.74
CPSF7-214ENST00000535222 MTMR10Q9NXD2 777 aa10.44□□□□□ -0.74
CPSF7-214ENST00000535222 UBR2Q8IWV8 1755 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms