RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 COL15A1P39059 1388 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 NUP98P52948 1817 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 GNAI2P04899 355 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 GNAI3P08754 354 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
RPS3-219ENST00000534440 C1QTNF8P60827 252 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 HLFQ16534 295 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 ANKRD44Q8N8A2 993 aa12.61□□□□□ -0.39
RPS3-219ENST00000534440 GRM8O00222 908 aa12.6□□□□□ -0.39
RPS3-219ENST00000534440 NEXNQ0ZGT2 675 aa12.6□□□□□ -0.39
RPS3-219ENST00000534440 GCKRQ14397 625 aa12.6□□□□□ -0.39
RPS3-219ENST00000534440 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
RPS3-219ENST00000534440 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
RPS3-219ENST00000534440 NLGN2Q8NFZ4 835 aa12.6□□□□□ -0.39
RPS3-219ENST00000534440 SUCLG2Q96I99 432 aa12.6□□□□□ -0.39
RPS3-219ENST00000534440 RWDD1Q9H446 243 aaPredicted RBP12.6□□□□□ -0.39
RPS3-219ENST00000534440 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
RPS3-219ENST00000534440 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
RPS3-219ENST00000534440 GPR162Q16538 588 aa12.59□□□□□ -0.39
RPS3-219ENST00000534440 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
RPS3-219ENST00000534440 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
RPS3-219ENST00000534440 ISCA1Q9BUE6 129 aa12.59□□□□□ -0.39
RPS3-219ENST00000534440 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
RPS3-219ENST00000534440 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
RPS3-219ENST00000534440 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
RPS3-219ENST00000534440 POLD1P28340 1107 aa12.58□□□□□ -0.4
RPS3-219ENST00000534440 CASP7P55210 303 aa12.58□□□□□ -0.4
RPS3-219ENST00000534440 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
RPS3-219ENST00000534440 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
RPS3-219ENST00000534440 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
RPS3-219ENST00000534440 UBN2Q6ZU65 1347 aa12.58□□□□□ -0.4
RPS3-219ENST00000534440 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
RPS3-219ENST00000534440 EPHA10Q5JZY3 1008 aa12.57□□□□□ -0.4
RPS3-219ENST00000534440 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
RPS3-219ENST00000534440 RPAP2Q8IXW5 612 aaPredicted RBP12.57□□□□□ -0.4
RPS3-219ENST00000534440 C9orf78Q9NZ63 289 aaPredicted RBP12.57□□□□□ -0.4
RPS3-219ENST00000534440 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
RPS3-219ENST00000534440 TUBGCP6Q96RT7 1819 aa12.57□□□□□ -0.4
RPS3-219ENST00000534440 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
RPS3-219ENST00000534440 GNPATO15228 680 aa12.56□□□□□ -0.4
RPS3-219ENST00000534440 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.46e-77■□□□□ 9.7
RPS3-219ENST00000534440 GPTP24298 496 aa12.56□□□□□ -0.4
RPS3-219ENST00000534440 UBE3BQ7Z3V4 1068 aa12.56□□□□□ -0.4
RPS3-219ENST00000534440 BICC1Q9H694 974 aaKnown RBP12.56□□□□□ -0.4
RPS3-219ENST00000534440 CWC25Q9NXE8 425 aaPredicted RBP12.56□□□□□ -0.4
RPS3-219ENST00000534440 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
RPS3-219ENST00000534440 A0A087WZG4 1122 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 TRIM28Q13263 835 aaKnown RBP12.55□□□□□ -0.4
RPS3-219ENST00000534440 MTX1Q13505 466 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 POLA2Q14181 598 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
RPS3-219ENST00000534440 H7C1W4 665 aa12.54□□□□□ -0.4
RPS3-219ENST00000534440 PDE4AP27815 886 aa12.54□□□□□ -0.4
RPS3-219ENST00000534440 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
RPS3-219ENST00000534440 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
RPS3-219ENST00000534440 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
RPS3-219ENST00000534440 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
RPS3-219ENST00000534440 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
RPS3-219ENST00000534440 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
RPS3-219ENST00000534440 LAMB2P55268 1798 aa12.53□□□□□ -0.4
RPS3-219ENST00000534440 NUCB1Q02818 461 aa12.53□□□□□ -0.4
RPS3-219ENST00000534440 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
RPS3-219ENST00000534440 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
RPS3-219ENST00000534440 DDX60Q8IY21 1712 aaKnown RBP12.53□□□□□ -0.4
RPS3-219ENST00000534440 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
RPS3-219ENST00000534440 FOXO4P98177 505 aa12.52□□□□□ -0.41
RPS3-219ENST00000534440 RABL6Q3YEC7 729 aaPredicted RBP12.52□□□□□ -0.41
RPS3-219ENST00000534440 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
RPS3-219ENST00000534440 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
RPS3-219ENST00000534440 AK7Q96M32 723 aa12.52□□□□□ -0.41
RPS3-219ENST00000534440 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
RPS3-219ENST00000534440 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
RPS3-219ENST00000534440 HMMRO75330 724 aa12.51□□□□□ -0.41
RPS3-219ENST00000534440 PHF14O94880 888 aa12.51□□□□□ -0.41
RPS3-219ENST00000534440 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
RPS3-219ENST00000534440 RGS3P49796 1198 aa12.51□□□□□ -0.41
RPS3-219ENST00000534440 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
RPS3-219ENST00000534440 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
RPS3-219ENST00000534440 LNPKQ9C0E8 428 aa12.51□□□□□ -0.41
RPS3-219ENST00000534440 EXOC6BQ9Y2D4 811 aa12.51□□□□□ -0.41
RPS3-219ENST00000534440 CD2APQ9Y5K6 639 aa12.51□□□□□ -0.41
RPS3-219ENST00000534440 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
RPS3-219ENST00000534440 SUSD4Q5VX71 490 aa12.5□□□□□ -0.41
RPS3-219ENST00000534440 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
RPS3-219ENST00000534440 MSL1Q68DK7 614 aa12.5□□□□□ -0.41
RPS3-219ENST00000534440 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
RPS3-219ENST00000534440 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
RPS3-219ENST00000534440 ZBTB38Q8NAP3 1195 aaPredicted RBP12.5□□□□□ -0.41
RPS3-219ENST00000534440 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
RPS3-219ENST00000534440 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
RPS3-219ENST00000534440 PA2G4Q9UQ80 394 aaKnown RBP12.5□□□□□ -0.41
RPS3-219ENST00000534440 MYH3P11055 1940 aa12.49□□□□□ -0.41
RPS3-219ENST00000534440 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
RPS3-219ENST00000534440 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms