RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 BRIP1Q9BX63 1249 aa30.81■■■□□ 2.52
SIPA1-210ENST00000534406 RIC1Q4ADV7 1423 aa30.8■■■□□ 2.52
SIPA1-210ENST00000534406 DLEC1Q9Y238 1755 aa30.79■■■□□ 2.52
SIPA1-210ENST00000534406 COL11A2P13942 1736 aaPredicted RBP30.79■■■□□ 2.52
SIPA1-210ENST00000534406 NUTM1Q86Y26 1132 aa30.79■■■□□ 2.52
SIPA1-210ENST00000534406 KIF16BQ96L93 1317 aa30.78■■■□□ 2.52
SIPA1-210ENST00000534406 TNRC6CQ9HCJ0 1690 aaKnown RBP30.78■■■□□ 2.52
SIPA1-210ENST00000534406 BRPF1P55201 1214 aaPredicted RBP30.78■■■□□ 2.52
SIPA1-210ENST00000534406 CCDC191Q8NCU4 936 aa30.78■■■□□ 2.52
SIPA1-210ENST00000534406 TRMT112Q9UI30 125 aaKnown RBP30.78■■■□□ 2.52
SIPA1-210ENST00000534406 F6X3S4 739 aa30.77■■■□□ 2.52
SIPA1-210ENST00000534406 PDE6BP35913 854 aa30.77■■■□□ 2.52
SIPA1-210ENST00000534406 ERFEQ4G0M1 354 aa30.77■■■□□ 2.52
SIPA1-210ENST00000534406 CWC25Q9NXE8 425 aaPredicted RBP30.77■■■□□ 2.52
SIPA1-210ENST00000534406 SH3TC1Q8TE82 1336 aa30.76■■■□□ 2.52
SIPA1-210ENST00000534406 BRCA1P38398 1863 aaKnown RBP30.76■■■□□ 2.52
SIPA1-210ENST00000534406 DPEP1P16444 411 aa30.76■■■□□ 2.51
SIPA1-210ENST00000534406 LAMB2P55268 1798 aa30.75■■■□□ 2.51
SIPA1-210ENST00000534406 IGKV5-2P06315 115 aa30.75■■■□□ 2.51
SIPA1-210ENST00000534406 PDZRN3Q9UPQ7 1066 aa30.75■■■□□ 2.51
SIPA1-210ENST00000534406 A0A0G2JLW4 131 aa30.74■■■□□ 2.51
SIPA1-210ENST00000534406 C2CD5Q86YS7 1000 aa30.74■■■□□ 2.51
SIPA1-210ENST00000534406 LINS1Q8NG48 757 aa30.74■■■□□ 2.51
SIPA1-210ENST00000534406 NEURL1BA8MQ27 555 aa30.73■■■□□ 2.51
SIPA1-210ENST00000534406 CHRNA5P30532 468 aa30.73■■■□□ 2.51
SIPA1-210ENST00000534406 CWF19L2Q2TBE0 894 aaKnown RBP30.73■■■□□ 2.51
SIPA1-210ENST00000534406 H0YIN7 160 aa30.72■■■□□ 2.51
SIPA1-210ENST00000534406 DDX60Q8IY21 1712 aaKnown RBP30.72■■■□□ 2.51
SIPA1-210ENST00000534406 SLC4A10Q6U841 1118 aa30.71■■■□□ 2.51
SIPA1-210ENST00000534406 NOB1Q9ULX3 412 aaKnown RBP30.71■■■□□ 2.51
SIPA1-210ENST00000534406 GOLGB1Q14789 3259 aaKnown RBP30.71■■■□□ 2.51
SIPA1-210ENST00000534406 BCAR3O75815 825 aa30.7■■■□□ 2.51
SIPA1-210ENST00000534406 BEND3Q5T5X7 828 aa30.7■■■□□ 2.51
SIPA1-210ENST00000534406 ZBTB38Q8NAP3 1195 aaPredicted RBP30.7■■■□□ 2.51
SIPA1-210ENST00000534406 PCCAP05165 728 aaPredicted RBP30.69■■■□□ 2.5
SIPA1-210ENST00000534406 FAM89AQ96GI7 184 aa30.69■■■□□ 2.5
SIPA1-210ENST00000534406 API5Q9BZZ5 524 aaKnown RBP30.69■■■□□ 2.5
SIPA1-210ENST00000534406 KLRG2A4D1S0 409 aaPredicted RBP30.68■■■□□ 2.5
SIPA1-210ENST00000534406 KCNA3P22001 575 aa30.68■■■□□ 2.5
SIPA1-210ENST00000534406 SLC10A5Q5PT55 438 aa30.68■■■□□ 2.5
SIPA1-210ENST00000534406 SYNE4Q8N205 404 aa30.68■■■□□ 2.5
SIPA1-210ENST00000534406 GCKRQ14397 625 aa30.67■■■□□ 2.5
SIPA1-210ENST00000534406 RTL5Q5HYW3 569 aaPredicted RBP30.67■■■□□ 2.5
SIPA1-210ENST00000534406 PIM2Q9P1W9 311 aa30.67■■■□□ 2.5
SIPA1-210ENST00000534406 WWC3Q9ULE0 1092 aa30.67■■■□□ 2.5
SIPA1-210ENST00000534406 SRGNP10124 158 aa30.66■■■□□ 2.5
SIPA1-210ENST00000534406 HCLS1P14317 486 aaPredicted RBP30.66■■■□□ 2.5
SIPA1-210ENST00000534406 PELP1Q8IZL8 1130 aaKnown RBP30.66■■■□□ 2.5
SIPA1-210ENST00000534406 ARHGAP45Q92619 1136 aa30.66■■■□□ 2.5
SIPA1-210ENST00000534406 SRCIN1Q9C0H9 1055 aa30.66■■■□□ 2.5
SIPA1-210ENST00000534406 IRS4O14654 1257 aaPredicted RBP30.65■■■□□ 2.5
SIPA1-210ENST00000534406 IPO8O15397 1037 aaKnown RBP30.65■■■□□ 2.5
SIPA1-210ENST00000534406 ALDH1L1O75891 902 aa30.65■■■□□ 2.5
SIPA1-210ENST00000534406 HSP90B1P14625 803 aaKnown RBP30.65■■■□□ 2.5
SIPA1-210ENST00000534406 CRY2Q49AN0 593 aa30.65■■■□□ 2.5
SIPA1-210ENST00000534406 NLRP3Q96P20 1036 aa30.65■■■□□ 2.5
SIPA1-210ENST00000534406 CACNA1SQ13698 1873 aa30.64■■■□□ 2.5
SIPA1-210ENST00000534406 DCAF8L1A6NGE4 600 aa30.64■■■□□ 2.5
SIPA1-210ENST00000534406 STYK1Q6J9G0 422 aa30.64■■■□□ 2.5
SIPA1-210ENST00000534406 FRAT1Q92837 279 aaPredicted RBP30.64■■■□□ 2.5
SIPA1-210ENST00000534406 ZNF622Q969S3 477 aaKnown RBP eCLIP30.64■■■□□ 2.5
SIPA1-210ENST00000534406 MASTLQ96GX5 879 aa30.64■■■□□ 2.5
SIPA1-210ENST00000534406 ARFGEF1Q9Y6D6 1849 aa30.63■■■□□ 2.49
SIPA1-210ENST00000534406 NPR1P16066 1061 aa30.63■■■□□ 2.49
SIPA1-210ENST00000534406 GPR162Q16538 588 aa30.63■■■□□ 2.49
SIPA1-210ENST00000534406 C3orf67Q6ZVT6 689 aa30.63■■■□□ 2.49
SIPA1-210ENST00000534406 CDHR2Q9BYE9 1310 aa30.63■■■□□ 2.49
SIPA1-210ENST00000534406 DALRD3Q5D0E6 543 aaKnown RBP30.62■■■□□ 2.49
SIPA1-210ENST00000534406 RPGRQ92834 1020 aaKnown RBP30.62■■■□□ 2.49
SIPA1-210ENST00000534406 RCAN3Q9UKA8 241 aa30.62■■■□□ 2.49
SIPA1-210ENST00000534406 MYH3P11055 1940 aa30.61■■■□□ 2.49
SIPA1-210ENST00000534406 UBE3BQ7Z3V4 1068 aa30.61■■■□□ 2.49
SIPA1-210ENST00000534406 JARID2Q92833 1246 aaPredicted RBP30.61■■■□□ 2.49
SIPA1-210ENST00000534406 BCS1LQ9Y276 419 aa30.61■■■□□ 2.49
SIPA1-210ENST00000534406 YBX3P16989 372 aaKnown RBP eCLIP30.6■■■□□ 2.498e-7■■□□□ 12.2
SIPA1-210ENST00000534406 ATF7IPQ6VMQ6 1270 aa30.6■■■□□ 2.49
SIPA1-210ENST00000534406 TTLL6Q8N841 843 aa30.6■■■□□ 2.49
SIPA1-210ENST00000534406 CNKSR1Q969H4 720 aa30.6■■■□□ 2.49
SIPA1-210ENST00000534406 ABCC4O15439 1325 aa30.59■■■□□ 2.49
SIPA1-210ENST00000534406 H7C1W4 665 aa30.59■■■□□ 2.49
SIPA1-210ENST00000534406 ZKSCAN2Q63HK3 967 aa30.59■■■□□ 2.49
SIPA1-210ENST00000534406 GRM8O00222 908 aa30.58■■■□□ 2.49
SIPA1-210ENST00000534406 TRIM27P14373 513 aa30.58■■■□□ 2.49
SIPA1-210ENST00000534406 CCT4P50991 539 aaKnown RBP30.58■■■□□ 2.49
SIPA1-210ENST00000534406 PDE8AO60658 829 aa30.57■■■□□ 2.48
SIPA1-210ENST00000534406 SLX4Q8IY92 1834 aa30.57■■■□□ 2.48
SIPA1-210ENST00000534406 HOXA10P31260 410 aaPredicted RBP30.56■■■□□ 2.48
SIPA1-210ENST00000534406 CASP7P55210 303 aa30.56■■■□□ 2.48
SIPA1-210ENST00000534406 RBM17Q96I25 401 aaKnown RBP30.56■■■□□ 2.48
SIPA1-210ENST00000534406 C9orf78Q9NZ63 289 aaPredicted RBP30.56■■■□□ 2.48
SIPA1-210ENST00000534406 SF3B3Q15393 1217 aaKnown RBP30.55■■■□□ 2.48
SIPA1-210ENST00000534406 PRPF40BQ6NWY9 871 aaKnown RBP30.55■■■□□ 2.48
SIPA1-210ENST00000534406 GRIN3BO60391 1043 aa30.53■■■□□ 2.48
SIPA1-210ENST00000534406 ALDH1B1P30837 517 aa30.53■■■□□ 2.48
SIPA1-210ENST00000534406 CTSWP56202 376 aa30.53■■■□□ 2.48
SIPA1-210ENST00000534406 CRAMP1Q96RY5 1269 aa30.53■■■□□ 2.48
SIPA1-210ENST00000534406 DDX46Q7L014 1031 aaKnown RBP30.52■■■□□ 2.48
SIPA1-210ENST00000534406 PLA2G12BQ9BX93 195 aa30.52■■■□□ 2.48
SIPA1-210ENST00000534406 TNNQ9UQP3 1299 aa30.52■■■□□ 2.48
SIPA1-210ENST00000534406 CCDC152Q4G0S7 254 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms