RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 GUCY1B3Q02153 619 aa20.1■□□□□ 0.81
PHRF1-206ENST00000534320 CDC5LQ99459 802 aaKnown RBP20.1■□□□□ 0.81
PHRF1-206ENST00000534320 GOLGA8BA8MQT2 603 aa20.1■□□□□ 0.81
PHRF1-206ENST00000534320 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
PHRF1-206ENST00000534320 MAGEC2Q9UBF1 373 aaPredicted RBP20.1■□□□□ 0.81
PHRF1-206ENST00000534320 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
PHRF1-206ENST00000534320 ANKIB1Q9P2G1 1089 aa20.1■□□□□ 0.81
PHRF1-206ENST00000534320 SHROOM2Q13796 1616 aa20.1■□□□□ 0.81
PHRF1-206ENST00000534320 IL15P40933 162 aaPredicted RBP20.09■□□□□ 0.81
PHRF1-206ENST00000534320 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
PHRF1-206ENST00000534320 RBM5P52756 815 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■□□□ 13.2
PHRF1-206ENST00000534320 DHX8Q14562 1220 aaKnown RBP20.09■□□□□ 0.81
PHRF1-206ENST00000534320 USP5P45974 858 aa20.09■□□□□ 0.81
PHRF1-206ENST00000534320 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
PHRF1-206ENST00000534320 EPS15P42566 896 aa20.09■□□□□ 0.81
PHRF1-206ENST00000534320 PIBF1Q8WXW3 757 aa20.09■□□□□ 0.81
PHRF1-206ENST00000534320 RNF41Q9H4P4 317 aaPredicted RBP20.09■□□□□ 0.81
PHRF1-206ENST00000534320 SLC12A7Q9Y666 1083 aa20.08■□□□□ 0.81
PHRF1-206ENST00000534320 ARHGEF10O15013 1369 aa20.08■□□□□ 0.81
PHRF1-206ENST00000534320 CCP110O43303 1012 aa20.08■□□□□ 0.81
PHRF1-206ENST00000534320 HOXB7P09629 217 aa20.08■□□□□ 0.81
PHRF1-206ENST00000534320 DZIP1Q86YF9 867 aaKnown RBP20.08■□□□□ 0.8
PHRF1-206ENST00000534320 SMARCE1Q969G3 411 aa20.08■□□□□ 0.8
PHRF1-206ENST00000534320 HECW2Q9P2P5 1572 aa20.08■□□□□ 0.8
PHRF1-206ENST00000534320 HAND2P61296 217 aa20.07■□□□□ 0.8
PHRF1-206ENST00000534320 CEP131Q9UPN4 1083 aa20.07■□□□□ 0.8
PHRF1-206ENST00000534320 IFIT3O14879 490 aaKnown RBP20.07■□□□□ 0.8
PHRF1-206ENST00000534320 KIF1BO60333 1816 aa20.07■□□□□ 0.8
PHRF1-206ENST00000534320 NAP1L1P55209 391 aaKnown RBP20.07■□□□□ 0.8
PHRF1-206ENST00000534320 UBE2Q2Q8WVN8 375 aa20.07■□□□□ 0.8
PHRF1-206ENST00000534320 KLHL40Q2TBA0 621 aa20.07■□□□□ 0.8
PHRF1-206ENST00000534320 ZNF287Q9HBT7 754 aa20.07■□□□□ 0.8
PHRF1-206ENST00000534320 UQCRFS1P1P0C7P4 283 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 BCL11BQ9C0K0 894 aaPredicted RBP20.06■□□□□ 0.8
PHRF1-206ENST00000534320 LGR6Q9HBX8 967 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 METP08581 1390 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 EFCAB6Q5THR3 1501 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 RANBP6O60518 1105 aaKnown RBP20.06■□□□□ 0.8
PHRF1-206ENST00000534320 ATP2B3Q16720 1220 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 IQCA1Q86XH1 822 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 GOLGA8AA7E2F4 631 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 CBFA2T2O43439 604 aa20.06■□□□□ 0.8
PHRF1-206ENST00000534320 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
PHRF1-206ENST00000534320 IQGAP3Q86VI3 1631 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 ZFYP08048 801 aaPredicted RBP20.05■□□□□ 0.8
PHRF1-206ENST00000534320 STIM1Q13586 685 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 ZSCAN29Q8IWY8 852 aaPredicted RBP20.05■□□□□ 0.8
PHRF1-206ENST00000534320 MKNK2Q9HBH9 465 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 OFD1O75665 1012 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 KRT18P05783 430 aaKnown RBP20.05■□□□□ 0.8
PHRF1-206ENST00000534320 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 PLCD4Q9BRC7 762 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 PCDH11XQ9BZA7 1347 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 PCDH11YQ9BZA8 1340 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 KIAA0754O94854 1291 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 POLR3DP05423 398 aaPredicted RBP20.05■□□□□ 0.8
PHRF1-206ENST00000534320 MCMDC2Q4G0Z9 681 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 TFIP11Q9UBB9 837 aaKnown RBP20.05■□□□□ 0.8
PHRF1-206ENST00000534320 CHMLP26374 656 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 NBPF6Q5VWK0 638 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 NCOA7Q8NI08 942 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 NBPF4Q96M43 638 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
PHRF1-206ENST00000534320 SMTNL1A8MU46 457 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 NMIQ13287 307 aaPredicted RBP20.04■□□□□ 0.8
PHRF1-206ENST00000534320 CCDC152Q4G0S7 254 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 CCDC82Q8N4S0 544 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 BICC1Q9H694 974 aaKnown RBP20.04■□□□□ 0.8
PHRF1-206ENST00000534320 TET3O43151 1660 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 UQCRHLA0A096LP55 91 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 UQCRHP07919 91 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
PHRF1-206ENST00000534320 ZSCAN30Q86W11 494 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 NECAB1Q8N987 351 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 CTCFLQ8NI51 663 aaPredicted RBP20.04■□□□□ 0.8
PHRF1-206ENST00000534320 BRF1Q92994 677 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
PHRF1-206ENST00000534320 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 USP19O94966 1318 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 USP26Q9BXU7 913 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 ZSCAN22P10073 491 aaPredicted RBP20.03■□□□□ 0.8
PHRF1-206ENST00000534320 TRMT2AQ8IZ69 625 aaKnown RBP20.03■□□□□ 0.8
PHRF1-206ENST00000534320 OTUD7AQ8TE49 926 aaPredicted RBP20.03■□□□□ 0.8
PHRF1-206ENST00000534320 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 ATP6V1AP38606 617 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 TTLL5Q6EMB2 1281 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 FILIP1Q7Z7B0 1213 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 PPFIBP1Q86W92 1011 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 RPGRQ92834 1020 aaKnown RBP20.03■□□□□ 0.8
PHRF1-206ENST00000534320 TCEANC2Q96MN5 208 aa20.03■□□□□ 0.8
PHRF1-206ENST00000534320 SSRP1Q08945 709 aaKnown RBP20.02■□□□□ 0.8
PHRF1-206ENST00000534320 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.8
PHRF1-206ENST00000534320 PDCL2Q8N4E4 241 aa20.02■□□□□ 0.8
PHRF1-206ENST00000534320 DDX19AQ9NUU7 478 aaKnown RBP20.02■□□□□ 0.8
PHRF1-206ENST00000534320 ANO10Q9NW15 660 aa20.02■□□□□ 0.8
PHRF1-206ENST00000534320 DDB1Q16531 1140 aa20.02■□□□□ 0.79
PHRF1-206ENST00000534320 TMEM67Q5HYA8 995 aa20.02■□□□□ 0.79
PHRF1-206ENST00000534320 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.79
PHRF1-206ENST00000534320 AXDND1Q5T1B0 1012 aaPredicted RBP20.01■□□□□ 0.79
PHRF1-206ENST00000534320 MCM5P33992 734 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms