RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 RPGRQ92834 1020 aaKnown RBP25.85■■□□□ 1.73
NDUFS3-212ENST00000534208 ZNF277Q9NRM2 450 aaPredicted RBP25.85■■□□□ 1.73
NDUFS3-212ENST00000534208 ANXA1P04083 346 aa25.84■■□□□ 1.73
NDUFS3-212ENST00000534208 L3MBTL3Q96JM7 780 aaPredicted RBP25.84■■□□□ 1.73
NDUFS3-212ENST00000534208 PSMD1Q99460 953 aa25.84■■□□□ 1.73
NDUFS3-212ENST00000534208 CRAMP1Q96RY5 1269 aa25.83■■□□□ 1.73
NDUFS3-212ENST00000534208 GRIPAP1Q4V328 841 aa25.82■■□□□ 1.72
NDUFS3-212ENST00000534208 SLC10A5Q5PT55 438 aa25.82■■□□□ 1.72
NDUFS3-212ENST00000534208 COPS6Q7L5N1 327 aa25.82■■□□□ 1.72
NDUFS3-212ENST00000534208 SYNE4Q8N205 404 aa25.82■■□□□ 1.72
NDUFS3-212ENST00000534208 DDX21Q9NR30 783 aaKnown RBP eCLIP25.82■■□□□ 1.72
NDUFS3-212ENST00000534208 RNF123Q5XPI4 1314 aa25.82■■□□□ 1.72
NDUFS3-212ENST00000534208 ANKRD36CQ5JPF3 1778 aa25.82■■□□□ 1.72
NDUFS3-212ENST00000534208 SCN4AP35499 1836 aa25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 IQCA1LA6NCM1 817 aa25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 HOXB7P09629 217 aa25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 IARSP41252 1262 aaKnown RBP25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 HSP90AB3PQ58FF7 597 aa25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 JMYQ8N9B5 988 aa25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 XAGE3Q8WTP9 111 aa25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 RBM17Q96I25 401 aaKnown RBP25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 UTP14AQ9BVJ6 771 aaKnown RBP25.81■■□□□ 1.72
NDUFS3-212ENST00000534208 KRT24Q2M2I5 525 aa25.8■■□□□ 1.72
NDUFS3-212ENST00000534208 C3orf67Q6ZVT6 689 aa25.8■■□□□ 1.72
NDUFS3-212ENST00000534208 NECTIN2Q92692 538 aa25.8■■□□□ 1.72
NDUFS3-212ENST00000534208 FZD9O00144 591 aa25.79■■□□□ 1.72
NDUFS3-212ENST00000534208 CHADLQ6NUI6 762 aa25.79■■□□□ 1.72
NDUFS3-212ENST00000534208 NLRP3Q96P20 1036 aa25.79■■□□□ 1.72
NDUFS3-212ENST00000534208 LAS1LQ9Y4W2 734 aaKnown RBP25.79■■□□□ 1.72
NDUFS3-212ENST00000534208 ZNF541Q9H0D2 1346 aa25.79■■□□□ 1.72
NDUFS3-212ENST00000534208 CFAP44Q96MT7 982 aa25.78■■□□□ 1.72
NDUFS3-212ENST00000534208 AIMP1Q12904 312 aaKnown RBP25.77■■□□□ 1.72
NDUFS3-212ENST00000534208 IFFO2Q5TF58 517 aa25.77■■□□□ 1.72
NDUFS3-212ENST00000534208 NLRP10Q86W26 655 aa25.77■■□□□ 1.72
NDUFS3-212ENST00000534208 PPEF1O14829 653 aaPredicted RBP25.76■■□□□ 1.71
NDUFS3-212ENST00000534208 TCIRG1Q13488 830 aa25.76■■□□□ 1.71
NDUFS3-212ENST00000534208 TAF1DQ9H5J8 278 aaPredicted RBP25.76■■□□□ 1.71
NDUFS3-212ENST00000534208 CHPF2Q9P2E5 772 aa25.76■■□□□ 1.71
NDUFS3-212ENST00000534208 POTEIP0CG38 1075 aa25.75■■□□□ 1.71
NDUFS3-212ENST00000534208 POTEJP0CG39 1038 aa25.75■■□□□ 1.71
NDUFS3-212ENST00000534208 HDGFL1Q5TGJ6 251 aa25.75■■□□□ 1.71
NDUFS3-212ENST00000534208 JDP2Q8WYK2 163 aa25.75■■□□□ 1.71
NDUFS3-212ENST00000534208 LDHDQ86WU2 507 aa25.74■■□□□ 1.71
NDUFS3-212ENST00000534208 DBF4Q9UBU7 674 aaPredicted RBP25.74■■□□□ 1.71
NDUFS3-212ENST00000534208 ZNF853P0CG23 659 aa25.73■■□□□ 1.71
NDUFS3-212ENST00000534208 GPC2Q8N158 579 aa25.73■■□□□ 1.71
NDUFS3-212ENST00000534208 HACL1Q9UJ83 578 aa25.73■■□□□ 1.71
NDUFS3-212ENST00000534208 COL4A5P29400 1685 aa25.72■■□□□ 1.71
NDUFS3-212ENST00000534208 PLBD2Q8NHP8 589 aa25.72■■□□□ 1.71
NDUFS3-212ENST00000534208 MBIPQ9NS73 344 aa25.72■■□□□ 1.71
NDUFS3-212ENST00000534208 ATP6V0A2Q9Y487 856 aa25.72■■□□□ 1.71
NDUFS3-212ENST00000534208 PCNTO95613 3336 aa25.72■■□□□ 1.71
NDUFS3-212ENST00000534208 LAMB2P55268 1798 aa25.72■■□□□ 1.71
NDUFS3-212ENST00000534208 DUSP27Q5VZP5 1158 aa25.71■■□□□ 1.71
NDUFS3-212ENST00000534208 TRMT112Q9UI30 125 aaKnown RBP25.71■■□□□ 1.71
NDUFS3-212ENST00000534208 ABCC4O15439 1325 aa25.7■■□□□ 1.71
NDUFS3-212ENST00000534208 SH3TC1Q8TE82 1336 aa25.7■■□□□ 1.71
NDUFS3-212ENST00000534208 APAF1O14727 1248 aa25.7■■□□□ 1.7
NDUFS3-212ENST00000534208 ANKRD13DQ6ZTN6 518 aa25.7■■□□□ 1.7
NDUFS3-212ENST00000534208 SLC51AQ86UW1 340 aa25.7■■□□□ 1.7
NDUFS3-212ENST00000534208 IFT57Q9NWB7 429 aa25.7■■□□□ 1.7
NDUFS3-212ENST00000534208 ADAMTSL1Q8N6G6 1762 aa25.69■■□□□ 1.7
NDUFS3-212ENST00000534208 HCLS1P14317 486 aaPredicted RBP25.69■■□□□ 1.7
NDUFS3-212ENST00000534208 CALD1Q05682 793 aaKnown RBP25.69■■□□□ 1.7
NDUFS3-212ENST00000534208 TMX4Q9H1E5 349 aaPredicted RBP25.69■■□□□ 1.7
NDUFS3-212ENST00000534208 CREBZFQ9NS37 354 aa25.69■■□□□ 1.7
NDUFS3-212ENST00000534208 HYPKQ9NX55 129 aa25.69■■□□□ 1.7
NDUFS3-212ENST00000534208 PASKQ96RG2 1323 aa25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 TCERG1O14776 1098 aaKnown RBP25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 BBOX1O75936 387 aa25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 EPHX2P34913 555 aa25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 EIF6P56537 245 aaKnown RBP25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 PNMA8AQ86V59 439 aaPredicted RBP25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 LARGE2Q8N3Y3 721 aa25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 VPS33BQ9H267 617 aa25.68■■□□□ 1.7
NDUFS3-212ENST00000534208 GNAI1P63096 354 aa25.67■■□□□ 1.7
NDUFS3-212ENST00000534208 ISCA1Q9BUE6 129 aa25.67■■□□□ 1.7
NDUFS3-212ENST00000534208 SP8Q8IXZ3 490 aa25.66■■□□□ 1.7
NDUFS3-212ENST00000534208 RTFDC1Q9BY42 306 aaPredicted RBP25.66■■□□□ 1.7
NDUFS3-212ENST00000534208 EAPPQ56P03 285 aaPredicted RBP25.65■■□□□ 1.7
NDUFS3-212ENST00000534208 DDX46Q7L014 1031 aaKnown RBP25.65■■□□□ 1.7
NDUFS3-212ENST00000534208 ITGBL1O95965 494 aaPredicted RBP25.64■■□□□ 1.7
NDUFS3-212ENST00000534208 NIM1KQ8IY84 436 aa25.64■■□□□ 1.7
NDUFS3-212ENST00000534208 SUPT20HQ8NEM7 779 aa25.64■■□□□ 1.7
NDUFS3-212ENST00000534208 DDX60Q8IY21 1712 aaKnown RBP25.63■■□□□ 1.69
NDUFS3-212ENST00000534208 PPIP5K2O43314 1243 aa25.63■■□□□ 1.69
NDUFS3-212ENST00000534208 TRIM28Q13263 835 aaKnown RBP25.63■■□□□ 1.69
NDUFS3-212ENST00000534208 GRAPQ13588 217 aa25.63■■□□□ 1.69
NDUFS3-212ENST00000534208 GRAPLQ8TC17 118 aaPredicted RBP25.63■■□□□ 1.69
NDUFS3-212ENST00000534208 GJA3Q9Y6H8 435 aa25.63■■□□□ 1.69
NDUFS3-212ENST00000534208 TMC4Q7Z404 712 aa25.62■■□□□ 1.69
NDUFS3-212ENST00000534208 LTBP1Q14766 1721 aa25.61■■□□□ 1.69
NDUFS3-212ENST00000534208 ATP5J2-PTCD1G3V325 749 aa25.61■■□□□ 1.69
NDUFS3-212ENST00000534208 AOC3Q16853 763 aa25.61■■□□□ 1.69
NDUFS3-212ENST00000534208 DPP8Q6V1X1 898 aaPredicted RBP25.61■■□□□ 1.69
NDUFS3-212ENST00000534208 CLEC11AQ9Y240 323 aa25.61■■□□□ 1.69
NDUFS3-212ENST00000534208 ZNF316A6NFI3 1004 aaPredicted RBP25.6■■□□□ 1.69
NDUFS3-212ENST00000534208 LMOD1P29536 600 aaPredicted RBP25.6■■□□□ 1.69
NDUFS3-212ENST00000534208 SCNN1DP51172 638 aa25.6■■□□□ 1.69
NDUFS3-212ENST00000534208 SF3B3Q15393 1217 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms