RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 ATP5J2-PTCD1G3V325 749 aa19.93■□□□□ 0.78
RDX-216ENST00000533991 EXOSC9Q06265 439 aaKnown RBP19.92■□□□□ 0.78
RDX-216ENST00000533991 PRPF40BQ6NWY9 871 aaKnown RBP19.92■□□□□ 0.78
RDX-216ENST00000533991 NPHP1O15259 732 aa19.91■□□□□ 0.78
RDX-216ENST00000533991 NPR1P16066 1061 aa19.91■□□□□ 0.78
RDX-216ENST00000533991 TWISTNBQ3B726 338 aaPredicted RBP19.91■□□□□ 0.78
RDX-216ENST00000533991 PARP10Q53GL7 1025 aa19.91■□□□□ 0.78
RDX-216ENST00000533991 CNKSR1Q969H4 720 aa19.91■□□□□ 0.78
RDX-216ENST00000533991 UTP14AQ9BVJ6 771 aaKnown RBP19.91■□□□□ 0.78
RDX-216ENST00000533991 NYXQ9GZU5 481 aa19.91■□□□□ 0.78
RDX-216ENST00000533991 IBTKQ9P2D0 1353 aaPredicted RBP19.91■□□□□ 0.78
RDX-216ENST00000533991 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
RDX-216ENST00000533991 HCLS1P14317 486 aaPredicted RBP19.9■□□□□ 0.78
RDX-216ENST00000533991 HOXA10P31260 410 aaPredicted RBP19.9■□□□□ 0.78
RDX-216ENST00000533991 MIER1Q8N108 512 aa19.9■□□□□ 0.78
RDX-216ENST00000533991 GTF2E1P29083 439 aaPredicted RBP19.89■□□□□ 0.77
RDX-216ENST00000533991 TRIM28Q13263 835 aaKnown RBP19.89■□□□□ 0.77
RDX-216ENST00000533991 CCDC30Q5VVM6 783 aa19.89■□□□□ 0.77
RDX-216ENST00000533991 PPP1R42Q7Z4L9 355 aa19.89■□□□□ 0.77
RDX-216ENST00000533991 ZNF526Q8TF50 670 aaPredicted RBP19.89■□□□□ 0.77
RDX-216ENST00000533991 RIC1Q4ADV7 1423 aa19.87■□□□□ 0.77
RDX-216ENST00000533991 SNED1Q8TER0 1413 aa19.87■□□□□ 0.77
RDX-216ENST00000533991 HSP90AB3PQ58FF7 597 aa19.87■□□□□ 0.77
RDX-216ENST00000533991 RNF181Q9P0P0 153 aa19.87■□□□□ 0.77
RDX-216ENST00000533991 SLC4A2P04920 1241 aa19.86■□□□□ 0.77
RDX-216ENST00000533991 JARID2Q92833 1246 aaPredicted RBP19.86■□□□□ 0.77
RDX-216ENST00000533991 FAM89AQ96GI7 184 aa19.86■□□□□ 0.77
RDX-216ENST00000533991 TRMT112Q9UI30 125 aaKnown RBP19.86■□□□□ 0.77
RDX-216ENST00000533991 FER1L6Q2WGJ9 1857 aa19.86■□□□□ 0.77
RDX-216ENST00000533991 IGKV5-2P06315 115 aa19.85■□□□□ 0.77
RDX-216ENST00000533991 RIC3Q7Z5B4 369 aa19.85■□□□□ 0.77
RDX-216ENST00000533991 CDCA7LQ96GN5 454 aa19.85■□□□□ 0.77
RDX-216ENST00000533991 ANKRD36CQ5JPF3 1778 aa19.85■□□□□ 0.77
RDX-216ENST00000533991 CACNA1SQ13698 1873 aa19.84■□□□□ 0.77
RDX-216ENST00000533991 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
RDX-216ENST00000533991 KIF3CO14782 793 aa19.84■□□□□ 0.77
RDX-216ENST00000533991 GOLGA2Q08379 1002 aa19.84■□□□□ 0.77
RDX-216ENST00000533991 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
RDX-216ENST00000533991 MYD88Q99836 296 aa19.84■□□□□ 0.77
RDX-216ENST00000533991 METTL22Q9BUU2 404 aaPredicted RBP19.84■□□□□ 0.77
RDX-216ENST00000533991 CCDC88AQ3V6T2 1871 aa19.84■□□□□ 0.77
RDX-216ENST00000533991 LMNB1P20700 586 aa19.83■□□□□ 0.77
RDX-216ENST00000533991 RTL5Q5HYW3 569 aaPredicted RBP19.83■□□□□ 0.77
RDX-216ENST00000533991 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.77
RDX-216ENST00000533991 CRAMP1Q96RY5 1269 aa19.83■□□□□ 0.77
RDX-216ENST00000533991 MAP3K2Q9Y2U5 619 aa19.83■□□□□ 0.77
RDX-216ENST00000533991 SH3TC1Q8TE82 1336 aa19.82■□□□□ 0.76
RDX-216ENST00000533991 COL4A1P02462 1669 aa19.82■□□□□ 0.76
RDX-216ENST00000533991 KSR2Q6VAB6 950 aa19.82■□□□□ 0.76
RDX-216ENST00000533991 NLRP3Q96P20 1036 aa19.82■□□□□ 0.76
RDX-216ENST00000533991 NMRK2Q9NPI5 230 aa19.82■□□□□ 0.76
RDX-216ENST00000533991 ARFGEF2Q9Y6D5 1785 aa19.82■□□□□ 0.76
RDX-216ENST00000533991 TAF1P21675 1872 aa19.82■□□□□ 0.76
RDX-216ENST00000533991 LTBP3Q9NS15 1303 aa19.81■□□□□ 0.76
RDX-216ENST00000533991 ALDH1B1P30837 517 aa19.81■□□□□ 0.76
RDX-216ENST00000533991 SLFN5Q08AF3 891 aa19.81■□□□□ 0.76
RDX-216ENST00000533991 TRMT2AQ8IZ69 625 aaKnown RBP19.81■□□□□ 0.76
RDX-216ENST00000533991 GPBP1L1Q9HC44 474 aaPredicted RBP19.8■□□□□ 0.76
RDX-216ENST00000533991 LAMB2P55268 1798 aa19.8■□□□□ 0.76
RDX-216ENST00000533991 ABCC4O15439 1325 aa19.79■□□□□ 0.76
RDX-216ENST00000533991 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
RDX-216ENST00000533991 POTECB2RU33 542 aa19.79■□□□□ 0.76
RDX-216ENST00000533991 FLIIQ13045 1269 aa19.79■□□□□ 0.76
RDX-216ENST00000533991 SF3B3Q15393 1217 aaKnown RBP19.79■□□□□ 0.76
RDX-216ENST00000533991 RPGRQ92834 1020 aaKnown RBP19.79■□□□□ 0.76
RDX-216ENST00000533991 C1QTNF8P60827 252 aa19.78■□□□□ 0.76
RDX-216ENST00000533991 CWF19L2Q2TBE0 894 aaKnown RBP19.78■□□□□ 0.76
RDX-216ENST00000533991 CCDC93Q567U6 631 aa19.78■□□□□ 0.76
RDX-216ENST00000533991 ZBTB38Q8NAP3 1195 aaPredicted RBP19.78■□□□□ 0.76
RDX-216ENST00000533991 CCDC191Q8NCU4 936 aa19.78■□□□□ 0.76
RDX-216ENST00000533991 RBM17Q96I25 401 aaKnown RBP19.78■□□□□ 0.76
RDX-216ENST00000533991 STK31Q9BXU1 1019 aa19.78■□□□□ 0.76
RDX-216ENST00000533991 TAOK3Q9H2K8 898 aa19.78■□□□□ 0.76
RDX-216ENST00000533991 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
RDX-216ENST00000533991 ZNF277Q9NRM2 450 aaPredicted RBP19.78■□□□□ 0.76
RDX-216ENST00000533991 DDX60Q8IY21 1712 aaKnown RBP19.77■□□□□ 0.76
RDX-216ENST00000533991 IRS4O14654 1257 aaPredicted RBP19.77■□□□□ 0.76
RDX-216ENST00000533991 FKBP4Q02790 459 aaKnown RBP eCLIP19.77■□□□□ 0.76
RDX-216ENST00000533991 COL4A5P29400 1685 aa19.76■□□□□ 0.75
RDX-216ENST00000533991 F6X3S4 739 aa19.76■□□□□ 0.75
RDX-216ENST00000533991 PCCAP05165 728 aaPredicted RBP19.76■□□□□ 0.75
RDX-216ENST00000533991 CELF1Q92879 486 aaKnown RBP19.76■□□□□ 0.75
RDX-216ENST00000533991 NEURL1BA8MQ27 555 aa19.75■□□□□ 0.75
RDX-216ENST00000533991 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
RDX-216ENST00000533991 DDX58O95786 925 aaKnown RBP19.75■□□□□ 0.75
RDX-216ENST00000533991 CASP7P55210 303 aa19.75■□□□□ 0.75
RDX-216ENST00000533991 CHMP4AQ9BY43 222 aa19.75■□□□□ 0.75
RDX-216ENST00000533991 CWC25Q9NXE8 425 aaPredicted RBP19.75■□□□□ 0.75
RDX-216ENST00000533991 ATP6V0A2Q9Y487 856 aa19.75■□□□□ 0.75
RDX-216ENST00000533991 CEP350Q5VT06 3117 aa19.75■□□□□ 0.75
RDX-216ENST00000533991 GLTPD2A6NH11 291 aa19.74■□□□□ 0.75
RDX-216ENST00000533991 H7C1W4 665 aa19.74■□□□□ 0.75
RDX-216ENST00000533991 SOGA3Q5TF21 947 aa19.74■□□□□ 0.75
RDX-216ENST00000533991 RTKN2Q8IZC4 609 aa19.74■□□□□ 0.75
RDX-216ENST00000533991 RRAGCQ9HB90 399 aa19.74■□□□□ 0.75
RDX-216ENST00000533991 SEC31BQ9NQW1 1179 aa19.74■□□□□ 0.75
RDX-216ENST00000533991 DICER1Q9UPY3 1922 aaKnown RBP19.74■□□□□ 0.75
RDX-216ENST00000533991 E9PSI1 815 aa19.73■□□□□ 0.75
RDX-216ENST00000533991 BBOX1O75936 387 aa19.73■□□□□ 0.75
RDX-216ENST00000533991 GRAPQ13588 217 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms