RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 USP17L10C9JJH3 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L13C9JLJ4 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L12C9JPN9 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L11C9JVI0 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L21D6R901 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L18D6R9N7 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L22D6RA61 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L17D6RBQ6 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L19D6RCP7 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L20D6RJB6 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
CHKA-208ENST00000533910 RASA1P20936 1047 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 SCNN1AP37088 669 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L24Q0WX57 530 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 RALBP1Q15311 655 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 PLEKHM2Q8IWE5 1019 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 YTHDC1Q96MU7 727 aaKnown RBP7.72□□□□□ -1.17
CHKA-208ENST00000533910 CCDC85AQ96PX6 553 aaPredicted RBP7.72□□□□□ -1.17
CHKA-208ENST00000533910 PANK3Q9H999 370 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 GPSM3Q9Y4H4 160 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 EVC2Q86UK5 1308 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 TTC24A2A3L6 582 aaPredicted RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 LGR5O75473 907 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 LTKP29376 864 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 KCNA1Q09470 495 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 AGERQ15109 404 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 CTC1Q2NKJ3 1217 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 DZIP3Q86Y13 1208 aaKnown RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 THEMISQ8N1K5 641 aaPredicted RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 RGS22Q8NE09 1264 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 SIRT1Q96EB6 747 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 CDCA7Q9BWT1 371 aaPredicted RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 MYBBP1AQ9BQG0 1328 aaKnown RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 CHD2O14647 1828 aaKnown RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 BRD4O60885 1362 aaPredicted RBP7.71□□□□□ -1.18
CHKA-208ENST00000533910 ATAD2Q6PL18 1390 aa7.71□□□□□ -1.18
CHKA-208ENST00000533910 MON2Q7Z3U7 1717 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 AKAP12Q02952 1782 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 AVPP01185 164 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 CLDN10P78369 228 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 TRIM32Q13049 653 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 PTK7Q13308 1070 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 OXLD1Q5BKU9 147 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 PHLDB3Q6NSJ2 640 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.18
CHKA-208ENST00000533910 ZNF428Q96B54 188 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 ZNF594Q96JF6 807 aaPredicted RBP7.7□□□□□ -1.18
CHKA-208ENST00000533910 PRAM1Q96QH2 718 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 KIF20BQ96Q89 1820 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 ANKRD36BQ8N2N9 1353 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 PIK3R4Q99570 1358 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 PLEKHH1Q9ULM0 1364 aa7.7□□□□□ -1.18
CHKA-208ENST00000533910 PTPRUQ92729 1446 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 ITSN1Q15811 1721 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 ATP7BP35670 1465 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 CD163L1Q9NR16 1453 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 NWD1Q149M9 1564 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 WNT7AO00755 349 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 AXIN1O15169 862 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 ERFEQ4G0M1 354 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 CCDC184Q52MB2 194 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 LARP1Q6PKG0 1096 aaKnown RBP7.69□□□□□ -1.18
CHKA-208ENST00000533910 SH3RF1Q7Z6J0 888 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 TXNDC2Q86VQ3 553 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 OGFOD1Q8N543 542 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 STK26Q9P289 416 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 EID1Q9Y6B2 187 aa7.69□□□□□ -1.18
CHKA-208ENST00000533910 CDC42BPGQ6DT37 1551 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 POTECB2RU33 542 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 RAB15P59190 212 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 ELOAQ14241 798 aaKnown RBP7.68□□□□□ -1.18
CHKA-208ENST00000533910 ZNF511Q8NB15 262 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 SNIP1Q8TAD8 396 aaKnown RBP7.68□□□□□ -1.18
CHKA-208ENST00000533910 MRS2Q9HD23 443 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 TBX22Q9Y458 520 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 ROBO2Q9HCK4 1378 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 NSD3Q9BZ95 1437 aa7.68□□□□□ -1.18
CHKA-208ENST00000533910 NRKQ7Z2Y5 1582 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 FAM196BA6NMK8 535 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 DPYDQ12882 1025 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 NLRP13Q86W25 1043 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 FAM200AQ8TCP9 573 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 POGKQ9P215 609 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 DOLKQ9UPQ8 538 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 KNSTRNQ9Y448 316 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 NSD2O96028 1365 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 INSRP06213 1382 aa7.67□□□□□ -1.18
CHKA-208ENST00000533910 NALCNQ8IZF0 1738 aa7.66□□□□□ -1.18
CHKA-208ENST00000533910 ZBTB7BO15156 539 aaPredicted RBP7.66□□□□□ -1.18
CHKA-208ENST00000533910 HMGB1P09429 215 aaKnown RBP7.66□□□□□ -1.18
CHKA-208ENST00000533910 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
CHKA-208ENST00000533910 SH3BP2P78314 561 aa7.66□□□□□ -1.18
CHKA-208ENST00000533910 EML3Q32P44 896 aa7.66□□□□□ -1.18
CHKA-208ENST00000533910 ANKMY2Q8IV38 441 aa7.66□□□□□ -1.18
CHKA-208ENST00000533910 ZNF592Q92610 1267 aa7.66□□□□□ -1.18
CHKA-208ENST00000533910 A0A1W2PP64 1363 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms